Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre03.g172950.t1.2
CDS Infomation

pacid=30787716 polypeptide=Cre03.g172950.t1.2 locus=Cre03.g172950 ID=Cre03.g172950.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGGAAAGAAGGATAAGGGCGACAAGAAGGGCGAGGCGGCCGAGACCAAGTCGGCGGCC
GCTGGTGGGGAGATGTCGGTGGGCGAGGCGCAACAGCGGACAGACTTTCTTATCCAGCCA
GAGAAGACTGTACCCAAGCTGGACACCAGCAAGTGGCCCCTACTGCTGAAGAACTATGAC
AAGCTCAATGTCCGCACCGGCCACTACACGCCCATTCCTGCGGGCTCCACGCCGCTTAAG
CGCCCTCTGAAGGAGTACCTGTCTTACGGTTGCATTAACCTGGACAAGCCGGCGAACCCC
AGCTCTCACGAGGTGGTGGCATGGGTCAAGCGCATGCTGCGCGTCGAGAAGACGGGCCAC
AGCGGCACCCTGGATCCCAAGGTGACGGGCAACCTCATCGTCTGTATCGACCGCGCCACG
CGCCTGGTGAAGGCGCAGCAGGCGGCGGGTAAGGAGTACGTGTGCATCGCGCGCTTCCAC
GGCAAGGTGGAGGGCGGCACCGCCGCAGTCAACAAGGCGCTGGAGACGCTGACCGGCGCG
CTCTTCCAGCGCCCTCCGCTCATCTCGGCCGTGAAGCGCCAGCTGCGCGTGCGCACCATC
TACCAGGCCAAGCTGTACGAGTACGACGAGGAGCGCCACCTGGCCGTGTTCTGGATCAGC
TGCGAGGCGGGCACCTACGTGCGCACGCTGTGCGTGCACCTGGGCCTGCTGCTGGGCGTG
GGCGGCCACATGCAGGAGCTGCGCCGCGTGCGCTCCGGCATCATGGGCGAGGCGCCCTCC
AACAACATGGTCACCATGCACGACGTGCTGGACGCGCAGTGGCTGTACGACAACTTCAAG
GACGAGTCCTACCTGCGCCGCGCCGTGATGCCGCTGGAGGTGCTGCTCACCAGCTTTAAG
CGCCTGGTGGTCAAGGACTCGGCGGTCAACGCCATCTGCTACGGCGCCAAGCTCATGATC
CCGGGCCTGCTGCGCTTCGAGAGCGGCGTGGAGGTGGACGACGAGGTGGTGCTCATGACC
ACCAAGGGCGAGGCGGTGGCGGTGGGCATTGCGCAGATGACCACGGGCGTCATGGCCACG
GTGGACCACGGCTGCGTGGCCAAGATCAAGCGTGTCATCATGGAGCGCGACACCTACCCG
CGCCGCTGGGGGCTGGGGCCGTACGCGCAGATCAAGAAGAAGCTCATCACCGAGGGCAAG
CTGGACAAGCACGGGCGGCCCAACGAGAACACGCCCAAGGAGTACCTGCGCTCGCTGCCC
GACTTCGTCGCCAACGGCGGCGCGTCGGCGGCCGCCGCCGCCCCGGCTGCGGCCACGCCG
GTGGAGATTAAGGAGGAGGGGAAAAAGGAGAAGAAGGAGAAGAAGGACAAGAGCGGGGAC
GTGGACATGGCTGAGGCGGACGTGAAGAAGGAGGAGAAGGAGAAGAAGAAGAAGGAGAAG
AAGGAGAAGAAGCGCGCCGCCTCGGAGTCTCCGGAGGTTAGCGAGGAGACGAAGCCGGAG
AAGAAGAAGGACAAGAAGGAGAAGAAGGACAAGAAGGAGAAGAAGAAGAAGGAGAAGAAG
GATTCGGACTCGGACTAA

Peptide Sequence

PEP ID

Cre03.g172950.t1.2
PEP Infomation

pacid=30787716 transcript=Cre03.g172950.t1.2 locus=Cre03.g172950 ID=Cre03.g172950.t1.2.v5.5 annot-version=v5.6
Sequence

MGKKDKGDKKGEAAETKSAAAGGEMSVGEAQQRTDFLIQPEKTVPKLDTSKWPLLLKNYD
KLNVRTGHYTPIPAGSTPLKRPLKEYLSYGCINLDKPANPSSHEVVAWVKRMLRVEKTGH
SGTLDPKVTGNLIVCIDRATRLVKAQQAAGKEYVCIARFHGKVEGGTAAVNKALETLTGA
LFQRPPLISAVKRQLRVRTIYQAKLYEYDEERHLAVFWISCEAGTYVRTLCVHLGLLLGV
GGHMQELRRVRSGIMGEAPSNNMVTMHDVLDAQWLYDNFKDESYLRRAVMPLEVLLTSFK
RLVVKDSAVNAICYGAKLMIPGLLRFESGVEVDDEVVLMTTKGEAVAVGIAQMTTGVMAT
VDHGCVAKIKRVIMERDTYPRRWGLGPYAQIKKKLITEGKLDKHGRPNENTPKEYLRSLP
DFVANGGASAAAAAPAAATPVEIKEEGKKEKKEKKDKSGDVDMAEADVKKEEKEKKKKEK
KEKKRAASESPEVSEETKPEKKKDKKEKKDKKEKKKKEKKDSDSD*

Transcript Sequence

Transcript ID

Cre03.g172950.t1.2
Transcript Infomation

pacid=30787716 locus=Cre03.g172950 annot-version=v5.6
Sequence

GCAACGTCATTAGCATTACTTACGCGGCCAATACCAAACGGAGACAGCCACTGCACAAAC
CAAAGTTTCGTCAACTCAGCCGCCCGAGCAAGCCGCCGCTTTCCTTCCAATAATATATAC
TACTCTTTTTCACACGTTCACTAGTTGCTGAATCATGGGAAAGAAGGATAAGGGCGACAA
GAAGGGCGAGGCGGCCGAGACCAAGTCGGCGGCCGCTGGTGGGGAGATGTCGGTGGGCGA
GGCGCAACAGCGGACAGACTTTCTTATCCAGCCAGAGAAGACTGTACCCAAGCTGGACAC
CAGCAAGTGGCCCCTACTGCTGAAGAACTATGACAAGCTCAATGTCCGCACCGGCCACTA
CACGCCCATTCCTGCGGGCTCCACGCCGCTTAAGCGCCCTCTGAAGGAGTACCTGTCTTA
CGGTTGCATTAACCTGGACAAGCCGGCGAACCCCAGCTCTCACGAGGTGGTGGCATGGGT
CAAGCGCATGCTGCGCGTCGAGAAGACGGGCCACAGCGGCACCCTGGATCCCAAGGTGAC
GGGCAACCTCATCGTCTGTATCGACCGCGCCACGCGCCTGGTGAAGGCGCAGCAGGCGGC
GGGTAAGGAGTACGTGTGCATCGCGCGCTTCCACGGCAAGGTGGAGGGCGGCACCGCCGC
AGTCAACAAGGCGCTGGAGACGCTGACCGGCGCGCTCTTCCAGCGCCCTCCGCTCATCTC
GGCCGTGAAGCGCCAGCTGCGCGTGCGCACCATCTACCAGGCCAAGCTGTACGAGTACGA
CGAGGAGCGCCACCTGGCCGTGTTCTGGATCAGCTGCGAGGCGGGCACCTACGTGCGCAC
GCTGTGCGTGCACCTGGGCCTGCTGCTGGGCGTGGGCGGCCACATGCAGGAGCTGCGCCG
CGTGCGCTCCGGCATCATGGGCGAGGCGCCCTCCAACAACATGGTCACCATGCACGACGT
GCTGGACGCGCAGTGGCTGTACGACAACTTCAAGGACGAGTCCTACCTGCGCCGCGCCGT
GATGCCGCTGGAGGTGCTGCTCACCAGCTTTAAGCGCCTGGTGGTCAAGGACTCGGCGGT
CAACGCCATCTGCTACGGCGCCAAGCTCATGATCCCGGGCCTGCTGCGCTTCGAGAGCGG
CGTGGAGGTGGACGACGAGGTGGTGCTCATGACCACCAAGGGCGAGGCGGTGGCGGTGGG
CATTGCGCAGATGACCACGGGCGTCATGGCCACGGTGGACCACGGCTGCGTGGCCAAGAT
CAAGCGTGTCATCATGGAGCGCGACACCTACCCGCGCCGCTGGGGGCTGGGGCCGTACGC
GCAGATCAAGAAGAAGCTCATCACCGAGGGCAAGCTGGACAAGCACGGGCGGCCCAACGA
GAACACGCCCAAGGAGTACCTGCGCTCGCTGCCCGACTTCGTCGCCAAcggcggcgcgtc
ggcggccgccgccgccccggcTGCGGCCACGCCGGTGGAGATTAAGGAGGAGGGGAAAAA
GGAGAAGAAGGAGAAGAAGGACAAGAGCGGGGACGTGGACATGGCTGAGGCGGACGTgaa
gaaggaggagaaggagaagaagaagaaggagaagaagGAGAAGAAGCGCGCCGCCTCGGA
GTCTCCGGAGGTTAGCGAGGAGACGAAGCCGGAGAAGAAGAAGGACAAGaaggagaagaa
ggacaagaaggagaagaagaagAAGGAGAAGAAGGATTCGGACTCGGACTAAGCAGCTGG
CGTCAGCAGCAACGGGCGCGGCGGCGGATAGGCTAGCAGCGGCACATGCATCACCATATC
ATGGCGAGCCGCAGCTGCAGGCGGCTATGTCTTGCAGCGCGTTCTTGGCCCGCGGGCTGC
ATGTGTGCAGCTTGCTGCCGTAGACACTGGCCGAGGCCGTGCCGAGCTTCTTCGCCCAGT
TTGCATGTGTTTGGGGCGAGTTGGAGCCGGCCGGTTGCGGTTGGTGCTGTATAGTAGACG
GCCTTCAGGCGAAGGCTCTAGGACCCGGATCAAACTGTGCTCTGCTTCTCTAATGTGGGA
AGGCGGCGCGCGATACGCAGGTGGCCACGCGGCCTTCTAGGTCAGGCGGGCCGGGGCGAG
TGGTGCAGCGGTGTCGCTGGCAAGGGGTTATTAGATTGGGTAGCTGGACGCTCTCTGACA
CAGACAGGCTCACAATCGGACATCATCCTCGTGACGTGACGACTCCTTGACGAAAGTAGG
CATGTGAGGTACTTCACCGGGACTCCTAGACGAAAGCAGGTTGACAGGCACCACCAGCTG
ACGCAGATGTGGCAAGTGCTGTCCACGTGCGCAGTACTGAGTGTGTTGTTTGGACATGGG
TGGTGGGGGCTAGCGCAGACAGTGCATGAGTGCACGTTGCTCGGGCGACGCTGATGACAT
CGACAGTTGATGCCGGTTGCTAAGTAGGCATTATGGCAAGGTAGGCGGTCGGGGAGCAGG
AGGTGCTGCGGCGTGCGCATAGCGCGTCGTGAGCACTGCGGCAGCGGCCGGATATAGAGG
CGCTTGAGCACAAGTGCGGTGGAGTTGAATGTGCTTCCGGGATTGGGCCTTACGCGGGTC
CGGCTCGGGGTTTCCGAACCACCTAGCAAGGCCAGATCGCTCATGCGCTAACAGGCTATG
CTGCTGTAACATGTGCAGTGC