Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre03.g172850.t1.2
CDS Infomation

pacid=30787470 polypeptide=Cre03.g172850.t1.2 locus=Cre03.g172850 ID=Cre03.g172850.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCAGTCGCTTGCCAAGCAACTTTCTGCGACACCGCGCAAGGCGGGTCGCCCGCAGCTG
TGCGCGCGGGAGCGGTGCGCGCGGGTCGTGCGTGCACAGGCGGCAGGCGCCCCGGCCCCT
GCCGCGCCGGCAGCTGCCGCCGCTGCTGCCGCCAACAGCGATGAGCCCAAGTACGTCAAA
AACGACAAGATCTGCAAGGACGTTACCGAGGTTATCGGCAACACGCCCATGGTCTACCTG
AACCGCGTCACCCGGGGCTGTGTGGCCAAGGTGGCGGCCAAGCTGGAGATCATGCAGCCC
TGCAGCAGCGTCAAGGACCGCATCGGCCGCAACATGATCGAGGACGCGGAGAAGCGCGGC
ATGATCAAGCCCGGCGTCACCACCCTGGTGGAGCCCACCAGCGGCAACACCGGCATCGGC
CTGGCCTTCACCGCCGCCGCGCGCGGCTACAAGCTCATCCTCACCATGCCCGCCTCCATG
TCTCTGGAGCGCCGCGTGCTGCTGCGCGCCTTCGGGGCGGAGCTGGTGCTCACGGACCCC
GCCAAGGGCATGCGCGGCGCCGTGGAGAAGTGCAACGAGATTGCGGCCAAGACGCCCAAC
TCCTACATCCTGCAGCAGTTCGAGAACCCCGCCAACCCCGAGATCCACCGCCTGACCACG
GGCCCCGAGATCTGGCGCGACACGGCCGGCACCGTAGACATCTTGGTGGCGGGCGTGGGC
ACCGGCGGCACCGTGACCGGCACCGGCGAGTTCCTCAAGTCCAAGAAGCCGAGCCTGCAG
GTGATCGCCGTGGAGCCGTCCGAGAGCCCCGTGCTCAGCGGCGGCAAGCCCGGCCCCCAC
AAGATCCAGGGCATTGGCGCCGGCTTTGTGCCCGCCATCCTCAACACCACCGTGTATGAC
GAGGTCATCAAGATCCCCAGCGACGACGCGGTGCGCATGGCCAGCCGCCTGGCGGTGGAG
GAGGGCCTGTTCTGCGGCATCAGCTCCGGAGCCGCGGTGTTGGCGGCGGTGCAGGTGGCG
GCGCGCCCCGAGAACGCCGGCAAGCTGGTGGCGGTGGTGCTGCCGTCCTTCGGCGAGCGC
TACCTGTCCTCGGTGCTGTTCAACGACCTGCGGTTGGAGTGCGAGCAGCTCAAGCAGGAC
GAGCGGGTCAAGGTGGTGGACGCTGCGGGCCGCGAGCGCTACGTGCCGTGA

Peptide Sequence

PEP ID

Cre03.g172850.t1.2
PEP Infomation

pacid=30787470 transcript=Cre03.g172850.t1.2 locus=Cre03.g172850 ID=Cre03.g172850.t1.2.v5.5 annot-version=v5.6
Sequence

MQSLAKQLSATPRKAGRPQLCARERCARVVRAQAAGAPAPAAPAAAAAAAANSDEPKYVK
NDKICKDVTEVIGNTPMVYLNRVTRGCVAKVAAKLEIMQPCSSVKDRIGRNMIEDAEKRG
MIKPGVTTLVEPTSGNTGIGLAFTAAARGYKLILTMPASMSLERRVLLRAFGAELVLTDP
AKGMRGAVEKCNEIAAKTPNSYILQQFENPANPEIHRLTTGPEIWRDTAGTVDILVAGVG
TGGTVTGTGEFLKSKKPSLQVIAVEPSESPVLSGGKPGPHKIQGIGAGFVPAILNTTVYD
EVIKIPSDDAVRMASRLAVEEGLFCGISSGAAVLAAVQVAARPENAGKLVAVVLPSFGER
YLSSVLFNDLRLECEQLKQDERVKVVDAAGRERYVP*

Transcript Sequence

Transcript ID

Cre03.g172850.t1.2
Transcript Infomation

pacid=30787470 locus=Cre03.g172850 annot-version=v5.6
Sequence

CCTCCGTTCAAAAGGGTTGTTCTGTCATACACATATCCCTTACAGTCTAAAAATGCAGTC
GCTTGCCAAGCAACTTTCTGCGACACCGCGCAAGGCGGGTCGCCCGCAGCTGTGCGCGCG
GGAGCGGTGCGCGCGGGTCGTGCGTGCACAGGCGGCAGGCGCCCCGGCCCCTGCCGCGCC
GGCAGCTGCCGCCGCTGCTGCCGCCAACAGCGATGAGCCCAAGTACGTCAAAAACGACAA
GATCTGCAAGGACGTTACCGAGGTTATCGGCAACACGCCCATGGTCTACCTGAACCGCGT
CACCCGGGGCTGTGTGGCCAAGGTGGCGGCCAAGCTGGAGATCATGCAGCCCTGCAGCAG
CGTCAAgGACCGCATCGGCCGCAACATGATCGAGGACGCGGAGAAGCGCGGCATGATCAA
GCCCGGCGTCACCACCCTGGTGGAGCCCACCAGCGGCAACACCGGCATCGGCCTGGCCTT
CACCGCCGCCGCGCGCGGCTACAAGCTCATCCTCACCATGCCCGCCTCCATGTCTCTGGA
GCGCCGCGTGCTGCTGCGCGCCTTCGGGGCGGAGCTGGTGCTCACGGACCCCGCCAAGGG
CATGCGCGGCGCCGTGGAGAAGTGCAACGAGATTGCGGCCAAGACGCCCAACTCCTACAT
CCTGCAGCAGTTCGAGAACCCCGCCAACCCCGAGATCCACCGCCTGACCACGGGCCCCGA
GATCTGGCGCGACACGGCCGGCACCGTAGACATCTTGGTGGCGGGCGTGGGCACCGGCGG
CACCGTGACCGGCACCGGCGAGTTCCTCAAGTCCAAGAAGCCGAGCCTGCAGGTGATCGC
CGTGGAGCCGTCCGAGAGCCCCGTGCTCAGCGGCGGCAAGCCCGGCCCCCACAAGATCCA
GGGCATTGGCGCCGGCTTTGTGCCCGCCATCCTCAACACCACCGTGTATGACGAGGTCAT
CAAGATCCCCAGCGACGACGCGGTGCGCATGGCCAGCCGCCTGGCGGTGGAGGAGGGCCT
GTTCTGCGGCATCAGCTCCGGAGCCGCGGTGTTGGCGGCGGTGCAGGTGGCGGCGCGCCC
CGAGAACGCCGGCAAGCTGGTGGCGGTGGTGCTGCCGTCCTTCGGCGAGCGCTACCTGTC
CTCGGTGCTGTTCAACGACCTGCGGTTGGAGTGCGAGCAGCTCAAGCAGGACGAGCGGGT
CAAGGTGGTGGACGCTGCGGGCCGCGAGCGCTACGTGCCGTGAGCAGGAGGAAAGGATAG
CAGGAGCAGGAGCAGCGGCAGCGggaggagcagcgggaggaggagcaggaggaggaggGG
TCCGGGTTGTGGACAAAAGCGGCTTGGGGCGGGAGTTCTTGTGTATTGTGCGGGCTGCCG
CGTGCGAGATGCAGCGGCGTGCCTTGCACGTTGCATCCTGGCGGGATGGGTCCCGAGACC
CGAGGCTTCTGGCTGCTGCGCTAGCGCTTGCACGTTGGACTGCGTAGGGTGTAGCTCCTT
GGACAAAGCTTTGCCGGAAATGGCAGTGGCTGTGACTTTGGCAGTGAGCACGGTAGATTG
CGTGCGGGCTTGGCCGTCGTGCGTTTCAACGTGCGTGTTGGGCGACGTGGGTGCGAGTGA
GGGTGTGTGCGATTACTATGGAAGGGACTGTGACTTGGGTGGGAGCTGCGTGGGTGCTCG
AATGCCCTGTGCCtgtgtgtgtatgtgtgtgtgtgtgCCGATTACTGATGTTCGGGTCAG
CAGGATGGGACTGGCCGTCTCTGTGATGGAGGTATGCGGGTGTGCAGCTGGTGGGGGTGT
AGGCGGTGGGGCTGCTGGTGCTGGCTGCTGCGGGTGAAGCGGTGGCCGGATGCCAGCAGT
GGACAGTGGAAGTGGACAGGAAGGCCCTGCTGCAGGCCGCCACCTGTAAACTCCCGGCGC
T