Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre03.g166050.t1.2
CDS Infomation

pacid=30788180 polypeptide=Cre03.g166050.t1.2 locus=Cre03.g166050 ID=Cre03.g166050.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCACCCGAGGCGAACTCTTGCTGCGCGAAGGGCCCTGGATATGCCACGCCGCTGGAT
GCCTACAAGAACGGTGCGCGCGAGAAGCTGCTGTACGTGCCGTGCGTGGTTCCCGACCAC
TCGCGGCCCGACTACATCGCCACCATCGACGTGGACCCCGAGTCGGCCACCTACCAGCAG
GTCATCCACCGCCTGCCAATGCCGCACCTGGGAGACGAGCTGCACCACAGTGGCTGGAAC
TCGTGCTCCTCCTGCCACGCCGACCCCTCCGCCCCCAAGCGCAAGTTGCTGGTGCTGCCC
GCGCTCGGCTCCGGCCGCGTGTACGGTGTGGACACGCTGACGGACCCCCGCGCGCCGCGC
ATCGGGGCGGTCGCCGAGCCCGAGGACATCCAGGCAGCCACCGGCCTCAGCTACCTGCAC
ACCAGCCACTGCGCCCCGGACGGCAGCATCATGGTGAGCGCCATGGGCGACAAGGAGGGT
TCGGCGCGCGGCTCCTTCCTGCTGCTCACCCAGGACCTCAAGGTCAAGGGCGTGTGGAGC
CCCGAGGAGACGCCCTACGGCTACGACTTCTGGTACCAGCCCCGCCTCAACGTGATGGTC
AGCTCGGGCTGGGGCGCGCCCAAGGCCTTCAGCAAGGGCTTCAACCCCGCCGAGGTGGCG
GAGCAGTACGGCCAGTCGCTGTGGGTGTGGGACTGGGCCGGCCGCAAGATCAAGCAGCGC
ATTGACCTGGGCGACAAGGGACTGCTGCCGCTGGAGGTTCGCTTCCTGCACGAGCCCACC
GCGCCGCACGGCTTCGTGGGCGCCGCGCTGAGCTCGTCCGTGTTCCACTTCACGCCCTCG
GGCCCGGGCGAGGACGCGCCGTGGGCCGCCAACCTGGTGGTGGAGCAGCCCTGGACCAAG
GTGGAGGGCTGGGTGCTGCCGGAGCTGCCGCCCTGCATCACCGACATCCTCATCTCCCTC
AACGACAAGTTCCTGTACGTGAGCAACTGGCTGCGAGGCGACATCGTGCAGTTCGACATC
AGTGACCCCGCCCACCCCAAGGTGGCGGGCCGCGTGTGGGTGGGCGGCCTGGTGCACAAG
GACAGCCCGCTCAAGGTGGTGTCGGGTCTGCCCGAGGACACGCCCGAGCAGCCCGTGCTG
CCCACCGTGGCGGGCGTCACGCTGCGCGGCGGCCCCCAGATGCTGCAGCTGTCGCTGGAC
GGCCGCCGCCTGTACGTCACCAACAGCCTGTACAGCCCCTGGGACAAGCAGTTCTACCCC
TCGCTGGTGGAGGGCGGCAGCCACCTGCTCAAGATCGACGTGGACCCTGAGAACGGCGGC
ATGACGCTGGACACGGACTGGATCATTGACTTCGGCAAGGAGCCCGAGGGGCCGGTGCTC
GCACACGAGGTGCGCTACCCCGGCGGCGACTGCTCCAGTGACATTTGGATTTGA

Peptide Sequence

PEP ID

Cre03.g166050.t1.2
PEP Infomation

pacid=30788180 transcript=Cre03.g166050.t1.2 locus=Cre03.g166050 ID=Cre03.g166050.t1.2.v5.5 annot-version=v5.6
Sequence

MAPEANSCCAKGPGYATPLDAYKNGAREKLLYVPCVVPDHSRPDYIATIDVDPESATYQQ
VIHRLPMPHLGDELHHSGWNSCSSCHADPSAPKRKLLVLPALGSGRVYGVDTLTDPRAPR
IGAVAEPEDIQAATGLSYLHTSHCAPDGSIMVSAMGDKEGSARGSFLLLTQDLKVKGVWS
PEETPYGYDFWYQPRLNVMVSSGWGAPKAFSKGFNPAEVAEQYGQSLWVWDWAGRKIKQR
IDLGDKGLLPLEVRFLHEPTAPHGFVGAALSSSVFHFTPSGPGEDAPWAANLVVEQPWTK
VEGWVLPELPPCITDILISLNDKFLYVSNWLRGDIVQFDISDPAHPKVAGRVWVGGLVHK
DSPLKVVSGLPEDTPEQPVLPTVAGVTLRGGPQMLQLSLDGRRLYVTNSLYSPWDKQFYP
SLVEGGSHLLKIDVDPENGGMTLDTDWIIDFGKEPEGPVLAHEVRYPGGDCSSDIWI*

Transcript Sequence

Transcript ID

Cre03.g166050.t1.2
Transcript Infomation

pacid=30788180 locus=Cre03.g166050 annot-version=v5.6
Sequence

GAGGTCTGCAGGCCATCGCAATCGCGTTGGCGCCAAACAGCCTGCATGTGATACCTTGCA
GCTATGACAATAAACGATTAGACATACCTGTTCTCAGCATTTGCATATTTACCGCCTCGA
CTGCAATCCCGAAAGACCAACCGTCAGGCGGGACTCGCGTACTCTGTCAAGGCCTCCTGA
ACCTCTTCAGATATAATCGATTATAAAGTCCGCTTGGCACCGCTACATACCTTTGATTCA
ACTGCTGAAAATGGCACCCGAGGCGAACTCTTGCTGCGCGAAGGGCCCTGGATATGCCAC
GCCGCTGGATGCCTACAAGAACGGTGCGCGCGAGAAGCTGCTGTACGTGCCGTGCGTGGT
TCCCGACCACTCGCGGCCCGACTACATCGCCACCATCGACGTGGACCCCGAGTCGGCCAC
CTACCAGCAGGTCATCCACCGCCTGCCAATGCCGCACCTGGGAGACGAGCTGCACCACAG
TGGCTGGAACTCGTGCTCCTCCTGCCACGCCGACCCCTCCGCCCCCAAGCGCAAGTTGCT
GGTGCTGCCCGCGCTCGGCTCCGGCCGCGTGTACGGTGTGGACACGCTGACGGACCCCCG
CGCGCCGCGCATCGGGGCGGTCGCCGAGCCCGAGGACATCCAGGCAGCCACCGGCCTCAG
CTACCTGCACACCAGCCACTGCGCCCCGGACGGCAGCATCATGGTGAGCGCCATGGGCGA
CAAGGAGGGTTCGGCGCGCGGCTCCTTCCTGCTGCTCACCCAGGACCTCAAGGTCAAGGG
CGTGTGGAGCCCCGAGGAGACGCCCTACGGCTACGACTTCTGGTACCAGCCCCGCCTCAA
CGTGATGGTCAGCTCGGGCTGGGGCGCGCCCAAGGCCTTCAGCAAGGGCTTCAACCCCGC
CGAGGTGGCGGAGCAGTACGGCCAGTCGCTGTGGGTGTGGGACTGGGCCGGCCGCAAGAT
CAAGCAGCGCATTGACCTGGGCGACAAGGGACTGCTGCCGCTggagGTTCGCTTCCTGCA
CGAGCCCACCGCGCCGCACGGCTTCGTGGGCGCCGCGCTGAGCTCGTCCGTGTTCCACTT
CACGCCCTCGGGCCCGGGCGAGGACGCGCCGTGGGCCGCCAACCTGGTGGTGGAGCAGCC
CTGGACCAAGGTGGAGGGCTGGGTGCTGCCGGAGCTGCCGCCCTGCATCACCGACATCCT
CATCTCCCTCAACGACAAGTTCCTGTACGTGAGCAACTGGCTGCGAGGCGACATCGTGCA
GTTCGACATCAGTGACCCCGCCCACCCCAAGGTGGCGGGCCGCGTGTGGGTGGGCGGCCT
GGTGCACAAGGACAGCCCGCTCAAGGTGGTGTCGGGTCTGCCCGAGGACACGCCCGAGCA
GCCCGTGCTGCCCACCGTGGCGGGCGTCACGCTGCGCGGCGGCCCCCAGATGCTGCAGCT
GTCGCTGGACGGCCGCCGCCTGTACGTCACCAACAGCCTGTACAgCCCCTGGGACAAGCA
GTTCTACCCCTCGCTGGTGGAGGGCGGCAGCCACCTGCTCAAGATCGACGTGGACCCTGA
GAACGGCGGCATGACGCTGGACACGGACTGGATCATTGACTTCGGCAAGGAGCCCGAGGG
GCCGGTGCTCGCACACGAGGTGCGCTACCCCGGCGGCGACTGCTCCAGTGACATTTGGAT
TTGAAGGAGGAGCTGGAGGAAGGAGCAACATCGAGATCTGGTGGAGAGGATTGGATGCTG
AGGATTGGGTCCGAGCATATGAAAACCGGCAGGCTGCCGGGTTGTGCTAGGTTTGTTTTG
CGCTGGTGCACTGTGCTGGTCAAAGTTTTTGAGGTGGCGTGCTGACGTGGCTGGTGCGCG
GTGTGGGATTGGCGAGGCGTGGGCGAGGGGTGTCAGGGAGGCGGCGGACGTCCTGTATGA
ATGATTTGTCATCCCTTCTCACGGGTGACCCTGGTGCTTCGAATGAATGTACGGTATGAA
TGTTGGCTTTACATGGCGGCGGCGCCGTGAGCTTACTTGAGATTGGGTGACAGGATGCTG
CGAGTCATTGGTGTACCCTAAGCTTCGTGTTATCATACACACGCATCCTGCACATGCAAC
CCTTCACACGTTTAAGAACACCATAGCGCATTTCCACACGACATGAGCTACAAAGCTGTG
ATGGCGATTGGCGATTGAGCCACAAAGACTAGAGAGAGTCGAGGGAGTGAAGGCTGGCGC
GGTACTGAGCAAGCATTGGCCGTTTTGATGCCAACGATGGAATGCCGCTGAATGTTGTGG
GTTGTTCCTTTTTCTTATAGGCGCACCAGCTTCTTGGAAAAGCCGTGAGGCGCATGAGGC
ATGGGAAGCAGCAGGAAGCAGGAGGTTGTTGGCAGCGGGTCCGGGGGATGGGGGCTGCCG
TGTGTGTCGTTGAAGGCCACCCGCCAGCAATGTAACGTATCTTTTATACAGCTCGCGAAT
GCCATTGTTGCTTACCTTATAGACAAACTTTTGGTATTAGCGCTCAGCTTGCATCACCGC
AGGCATCGAGGCCGAAGCTCGCTGGCGACTCGGCGTCAGGCCTGGCGGTACAACACAGAT
GTAACGATATGGATGA