Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre03.g153900.t1.2
CDS Infomation

pacid=30788111 polypeptide=Cre03.g153900.t1.2 locus=Cre03.g153900 ID=Cre03.g153900.t1.2.v5.5 annot-version=v5.6
Sequence

ATGATCGCGCCGGCCGTCTCGCACGAGGACGCTCCAACGTCGACCTGCGCACCCAGCACC
TCCTCGACCGCAAACTGGGCACCCCTCAACGGGCGCACGGCTGTGGTGGTCGGCGCGGGC
CCTGCGGGATGCACGCTAGCCATGTACCTAGCTCGTTCAGGCTGGAAGGTGCAGGTGTAT
GAACGGCGGCCGGAGCCCGGCCCCGCCAACACCTCCCGGCAGCGCAGCTGGGTGCTGGCC
ATGTACCCCCGAGGCATCCGGCCAGTGAACGAGGTGGCCCAGGTGCCACTGCTTGCTGAG
CGGGCGTACAAGGGCCTGGTGCTCAAGCCAGCCAAGCCAAACAGCAAGCCCATCGTGCTG
GAGCGCACTGGAGTGCTCATGGACCGCACGCTGCTGGCCACCTCGCTGCTGGACGCCGCA
CGTGCGCAGTACAGCAGCCGTGTCAGCTTCACATTTAACGCCGCCCTCAGCGATGTCGAC
CTAACCGCAAAGGCCGCCACCTTCGCCTCCGCCGCCGCCACAGCAAACGTGGAGGCCGGT
AAGGAGCTGGTGGCCGCAGTGGCCGGCAGTAGCAGCAACAGTGCCGGTTCAACGATGGCT
GTAGCAGGGGAGCAGCAGCAGCAGTACCGGGCCCAGTACGACCTGCTGGTGGGCGCAGAC
GGCAGTAGCAGCACGCTGAGGTCGCTGCTGACGGAGGCGCTGCCAGGGCAGTTCGAAACA
GAGGTTCTGAGCCCCGGAACTGGCTGCTACAAGTCCGTGTACGGCTTGCCACCCGTCCCT
GAGGTGGAGGCTTGGGCCCCCGACAGCAACACGCCGCGCGACCAGCGTGTGCAGGGCGAG
TTCTTCTTCTTCCTGTCGGGCGGCACCAAGGGCATGATGTCCATGTGCCGCGACATTGAC
GGCAACTACTGCGGCTACCTGGCGGGCAATGCGCAGCTCTTTGCGGAGCTCAAGACGCGC
GAGGACTACCTGGCGGTGCTGCCTCAGGCCGGCCCGCAGCTGCCCGCCGCCTGGCTGCCG
CTCATTGCCGACCGCATGATGGAGGCGCCGCTCAGCACCTTCCCCACCATGCGCTCCCTG
TCCCGCTTCTGGGCCCCGGGCGGAGTGGTGCTCGTGGGCGACGCAGCTCACACCGTGACG
CCGGCACTGGGCCAGGGTCTCAACTCAGCGCTGCAGGACTGCGAGCTGCTGGCGGCGGAG
CTGGCGGCGGCGCCGTCGCTGGATGCTGGCGGCATTGACGCCGCCATTCGCCGGTTCAGT
GAGTCGCGGGCGCCCGAGGTGCGCGCGCTGCAGGAACTGGAGCTGCTGCAGGGTTCCTCG
TTGTCACCGCTGGGCCGGACCTCGGACCCGGCCAAGATGCTGGCGCTGCTTGTGCGCAAG
TGGATTGTGATCCATTACTCGGGCCTGGCGCTGTTGGGGACCGTCGTGGCCACCGCACAG
GCGGCCAACGCGGCGAAGAGGCGGCGCGAGGGCAAGGAGACGCCGGCCGTGAGCCGCACC
GACCGGCTCGCGGAGCAGGTGGAGGGCTCATACGTCAGGGACCCGCCCATGTACGAGCTG
CTGAAGGCGCACATGAACTACAGCGACATGCTGAGGCGCGTGTGGGGCATGGCGGCGCTG
GGCAGCGCCGGCACCTTCGCCATCCTGTACGGCCTAGTGAGCGGCGCGGCGTTGCTGGCG
TCGCGGGTGCTGGGCGCTTGA

Peptide Sequence

PEP ID

Cre03.g153900.t1.2
PEP Infomation

pacid=30788111 transcript=Cre03.g153900.t1.2 locus=Cre03.g153900 ID=Cre03.g153900.t1.2.v5.5 annot-version=v5.6
Sequence

MIAPAVSHEDAPTSTCAPSTSSTANWAPLNGRTAVVVGAGPAGCTLAMYLARSGWKVQVY
ERRPEPGPANTSRQRSWVLAMYPRGIRPVNEVAQVPLLAERAYKGLVLKPAKPNSKPIVL
ERTGVLMDRTLLATSLLDAARAQYSSRVSFTFNAALSDVDLTAKAATFASAAATANVEAG
KELVAAVAGSSSNSAGSTMAVAGEQQQQYRAQYDLLVGADGSSSTLRSLLTEALPGQFET
EVLSPGTGCYKSVYGLPPVPEVEAWAPDSNTPRDQRVQGEFFFFLSGGTKGMMSMCRDID
GNYCGYLAGNAQLFAELKTREDYLAVLPQAGPQLPAAWLPLIADRMMEAPLSTFPTMRSL
SRFWAPGGVVLVGDAAHTVTPALGQGLNSALQDCELLAAELAAAPSLDAGGIDAAIRRFS
ESRAPEVRALQELELLQGSSLSPLGRTSDPAKMLALLVRKWIVIHYSGLALLGTVVATAQ
AANAAKRRREGKETPAVSRTDRLAEQVEGSYVRDPPMYELLKAHMNYSDMLRRVWGMAAL
GSAGTFAILYGLVSGAALLASRVLGA*

Transcript Sequence

Transcript ID

Cre03.g153900.t1.2
Transcript Infomation

pacid=30788111 locus=Cre03.g153900 annot-version=v5.6
Sequence

CCAACACCGTTGAAAATGTTAAAGCCTGCGCAGCCAACGTGGCTTCGCCGATCTAGCAAC
TTCAATGAAGCCAGCACGTGCCGAGCTTCGGCCCCAAGCGTTGTGGCGCGCACCAATCCG
TCGTTCAACGCCAATGGCGCCGTGCCCTTGGCAGCGCTGGGGCCTCGCCCCAGCCAAGCA
TGGCAGTCCAGCAGGAATAATATGATCGCGCCGGCCGTCTCGCACGAGGACGCTCCAACG
TCGACCTGCGCACCCAGCACCTCCTCGACCGCAAACTGGGCACCCCTCAACGGGCGCACG
GCTGTGGTGGTCGGCGCGGGCCCTGCGGGATGCACGCTAGCCATGTACCTAGCTCGTTCA
GGCTGGAAGGTGCAGGTGTATGAACGGCGGCCGGAGCCCGGCCCCGCCAACACCTCCCGG
CAGCGCAGCTGGGTGCTGGCCATGTACCCCCGAGGCATCCGGCCAGTGAACGAGGTGGCC
CAGGTGCCACTGCTTGCTGAGCGGGCGTACAAGGGCCTGGTGCTCAAGCCAGCCAAGCCA
AACAGCAAGCCCATCGTGCTGGAGCGCACTGGAGTGCTCATGGACCGCACGCTGCTGGCC
ACCTCGCTGCTGGACGCCGCACGTGCGCAGTACAGCAGCCGTGTCAGCTTCACATTTAAC
GCCGCCCTCAGCGATGTCGACCTAACCGCAAAGGCCGCCACCTTCGCCTCCGCCGCCGCC
ACAGCAAACGTGGAGGCCGGTAAGGAGCTGGTGGCCGCAGTGGCCGGCAGTAGCAGCAAC
AGTGCCGGTTCAACGATGGCTGTAGCAGGGGAGCAGCAGCAGCAGTACCGGGCCCAGTAC
GACCTGCTGGTGGGCGCAGACGGCAGTAGCAGCACGCTGAGGTCGCTGCTGACGGAGGCG
CTGCCAGGGCAGTTCGAAACAGAGGTTCTGAGCCCCGGAACTGGCTGCTACAAGTCCGTG
TACGGCTTGCCACCCGTCCCTGAGGTGGAGGCTTGGGCCCCCGACAGCAACACGCCGCGC
GACCAGCGTGTGCAGGGCGAGTTCTTCTTCTTCCTGTCGGGCGGCACCAAGGGCATGATG
TCCATGTGCCGCGACATTGACGGCAACTACTGCGGCTACCTGGCGGGCAATGCGCAGCTC
TTTGCGGAGCTCAAGACGCGCGAGGACTACCTGGCGGTGCTGCCTCAGGCCGGCCCGCAG
CTGCCCGCCGCCTGGCTGCCGCTCATTGCCGACCGCATGATGGAGGCGCCGCTCAGCAcC
TTCCCCACCATGCGCTCCCTGTCCCGCTTCTGGGCCCCGGGCGGAGTGGTGCTCGTGGGC
GACGCAGCTCACACCGTGACGCCGGCACTGGGCCAGGGTCTCAACTCAGCGCTGCAGGAC
TGCGAGCTGCTGGCGGCGGAGCTGGCGGCGGCGCCGTCGCTGGATGCTGGCGGCATTGAC
GCCGCCATTCGCCGGTTCAGTGAGTCGCGGGCGCCCGAGGTGCGCGCGCTGCAGGAACTG
GAGCTGCTGCAGGGTTCCTCGTTGTCACCGCTGGGCCGGACCTCGGACCCGGCCAAGATG
CTGGCGCTGCTTGTGCGCAAGTGGATTGTGATCCATTACTCGGGCCTGGCGCTGTTGGGG
ACCGTCGTGGCCACCGCACAGGCGGCCAACGCGGCGAAGAGGCGGCGCGAGGGCAAGGAG
ACGCCGGCCGTGAGCCGCACCGACCGGCTCGCGGAGCAGGTGGAGGGCTCATACGTCAGG
GACCCGCCCATGTACGAGCTGCTGAAGGCGCACATGAACTACAGCGACATGCTGAGGCGC
GTGTGGGGCATGGCGGCGCTGGGCAGCGCCGGCACCTTCGCCATCCTGTACGGCCTAGTG
AGCGGCGCGGCGTTGCTGGCGTCGCGGGTGCTGGGCGCTTGATGAGTGAGCAAGTACGGC
AGTGCAGCATGGATAGGG