Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre02.g103000.t1.2
CDS Infomation

pacid=30785721 polypeptide=Cre02.g103000.t1.2 locus=Cre02.g103000 ID=Cre02.g103000.t1.2.v5.5 annot-version=v5.6
Sequence

ATGAAAAGTCGGTCAGCACTGCTGCTGCTTGGTCTGGGCCTCCTTGCTGGGCATGCCTGT
GCGCTCCGTTCGCTACAGCAAGTGTCAGATGCGGCAGCGGCCCAGGCATCACAGCCGCAG
CCGCAACTGCTGATGCCGGGCCTGCCAGTGCGGGAGATTTGCACAAACACCTGCAGCAAG
GCCAAGAACGGAGTGTGCGAGGAGGGCCGTGCGGGCAAGGTACACGTCATCGCGCCGTAC
CTAATGGCGTACTGTGACCTGGGGACGGACTGCGATGACTGCGGGCCGTGGAAGACCACT
GCCAGCAAGGTGCCGTGGGAGGACCCGGCCGTTGCGGGCCCAGTGCGCTTCCTCCAGAGC
AAGGATGTACAGATCCGTGTTAAGGCCGCGGCAGTGCCCTCTGCCATCAACTTCACGTTT
GCCTACACGGACCCCAAGGCCGACTACGACGTCTCCTACCACATGGACGTCTCCGGCGGC
GTTGAGGCGGGCATCACGGCGATTTCCTACAAGATCCTGAGCGGGCGCTGCAAGAAGGCG
GACGGCAGCCCGGCGCTGTTTGTTGACGTGGGCGCTAACTTTGGCTGGTTTGCCATCCTG
GCGGCGCGCCTCGGATGCAAGGTCATCGCATACGAGCCGGTCCCCATGTTCCGCGCGTTC
TTCGAGTACAGTGTCCACCTTAATGACCTCACCTCGCTCATTGACGTGCGCGCCGTCGTG
GTGAGCCACGAGACGGGGAAGAGTATGAAGATGGTGGTGCCCGCTCGCGGCATCTGGGGC
ACGGCTGGTATTGACGGCCTCAACATTGACCGCGCCATTGCAAGCTCCAAGGACGAGATC
GAGGTGCCCTCGGTGCGCCTGGAGGATGAGGTCAAGCAGGACGCACTGCTGCTAAAGATC
GATGTGGAGGGCTGGGAGTGGGCGGTTGTGAAGGGTGCCGAGCAGCTGCTCAAGAATTTT
TACGTGGAGAACATCGTCATGGAGTACTCGCCGGGTGTTCCCGAGCGCCACTTCCGCTGG
GACGACATGGCCGCCACGCCCGCCATGCTGGTGGACCTGATCCAAAAGTACGGCTACCGC
ATCGGCCACATTGGCGATGCCGGCAAGCACCACTCTGGCGGCTGGGACGCACCGTTGCCG
GCCCTGCGCGAGGTGGCCTTGGACAACCTCAAGTATGACGTCAACGACATCAAGCTCTGG
AGGGAGGGCAAGATGGCCTGCCCCTCGCCGCTCGAGTTGACTAAGTACCCGATGTGGGTG
CTGTGCGGTGGTGTGCCGGAGGGCCTCAACCCGCGTAGCCTCAGAGCCGAGATTGGCCAC
AACACCAACGTGTGGGCGGCCAAGGGCACCGCCCTGAGCGGTGGTGACCTGTTGAAGCTT
GAGGGCCTGTCGGGCATCCTAGACCCCAAGGACCCTGTCAACAAGTACTTCCAGACCAAC
AAGGACAACTTCGGTATGGGCAGCCGGCCCTGCTACCACTTGGATCCTGTTGTGCAGGTG
AAGCATCGTTGCAAGTGCAACAAGCAGGAGGCGTGTGGCGAGGAGGAGGCGGCGGTCATT
AAAGCGGCCGAGGAGGGCAAGATCGCCAATAATTACGTGCTGCCCTGA

Peptide Sequence

PEP ID

Cre02.g103000.t1.2
PEP Infomation

pacid=30785721 transcript=Cre02.g103000.t1.2 locus=Cre02.g103000 ID=Cre02.g103000.t1.2.v5.5 annot-version=v5.6
Sequence

MKSRSALLLLGLGLLAGHACALRSLQQVSDAAAAQASQPQPQLLMPGLPVREICTNTCSK
AKNGVCEEGRAGKVHVIAPYLMAYCDLGTDCDDCGPWKTTASKVPWEDPAVAGPVRFLQS
KDVQIRVKAAAVPSAINFTFAYTDPKADYDVSYHMDVSGGVEAGITAISYKILSGRCKKA
DGSPALFVDVGANFGWFAILAARLGCKVIAYEPVPMFRAFFEYSVHLNDLTSLIDVRAVV
VSHETGKSMKMVVPARGIWGTAGIDGLNIDRAIASSKDEIEVPSVRLEDEVKQDALLLKI
DVEGWEWAVVKGAEQLLKNFYVENIVMEYSPGVPERHFRWDDMAATPAMLVDLIQKYGYR
IGHIGDAGKHHSGGWDAPLPALREVALDNLKYDVNDIKLWREGKMACPSPLELTKYPMWV
LCGGVPEGLNPRSLRAEIGHNTNVWAAKGTALSGGDLLKLEGLSGILDPKDPVNKYFQTN
KDNFGMGSRPCYHLDPVVQVKHRCKCNKQEACGEEEAAVIKAAEEGKIANNYVLP*

Transcript Sequence

Transcript ID

Cre02.g103000.t1.2
Transcript Infomation

pacid=30785721 locus=Cre02.g103000 annot-version=v5.6
Sequence

TATAACCAGTTTCACATTCTTGGCACTAACTGACGCGCTTCCTGGGAGAAAAGCTGGGAC
TCGTCGTCGCGGGCTTGCTTGAGTCGCGCTGGCAGACATTACCTGCAAATTCTTTCGTGG
TGGAGCATACTGAAATTTATTGCATCGGTTCATACAGCTTTACAGTTCAGAGTTAGCCAC
ACTACAGCGGCACCCCAGCTCGTTGCTGGTCAACCAGGATGTGTAGTCATCAAAAACATG
CTATGAAAAGTCGGTCAGCACTGCTGCTGCTTGGTCTGGGCCTCCTTGCTGGGCATGCCT
GTGCGCTCCGTTCGCTACAGCAAGTGTCAGATGCGGCAGCGGCCCAGGCATCACAGCCGC
AGCCGCAACTGCTGATGCCGGGCCTGCCAGTGCGGGAGATTTGCACAAACACCTGCAGCA
AGGCCAAGAACGGAGTGTGCGAGGAGGGCCGTGCGGGCAAGGTACACGTCATCGCGCCGT
ACCTAATGGCGTACTGTGACCTGGGGACGGACTGCGATGACTGCGGGCCGTGGAAGACCA
CTGCCAGCAAGGTGCCGTGGGAGGACCCGGCCGTTGCGGGCCCAGTGCGCTTCCTCCAGA
GCAAGGATGTACAGATCCGTGTTAAGGCCGCGGCAGTGCCCTCTGCCATCAACTTCACGT
TTGCCTACACGGACCCCAAGGCCGACTACGACGTCTCCTACCACATGGACGTCTCCGGCG
GCGTTGAGGCGGGCATCACGGCGATTTCCTACAAGATCCTGAGCGGGCGCTGCAAGAAGG
CGGACGGCAGCCCGGCGCTGTTTGTTGACGTGGGCGCTAACTTTGGCTGGTTTGCCATCC
TGGCGGCGCGCCTCGGATGCAAGGTCATCGCATACGAGCCGGTCCCCATGTTCCGCGCGT
TCTTCGAGTACAGTGTCCACCTTAATGACCTCACCTCGCTCATTGACGTGCGCGCCGTCG
TGGTGAGCCACGAGACGGGGAAGAGTATGAAGATGGTGGTGCCCGCTCGCGGCATCTGGG
GCACGGCTGGTATTGACGGCCTCAACATTGACCGCGCCATTGCAAGCTCCAAGGACGAGA
TCGAGGTGCCCTCGGTGCGCCTGGAGGATGAGGTCAAGCAGGACGCACTGCtgctaaagA
TCGATGTGGAGGGCTGGGAGTGGGCGGTTGTGAAGGGTGCCGAGCAGCTGCTCAAGAATT
TTTACGTGGAGAACATCGTCATGGAGTACTCGCCGGGTGTTCCCGAGCGCCACTTCCGCT
GGGACGACATGGCCGCCACGCCCGCCATGCTGGTGGACCTGATCCAAAAGTACGGCTACC
GCATCGGCCACATTGGCGATGCCGGCAAGCACCACTCTGGCGGCTGGGACGCACCGTTGC
CGGCCCTGCGCGAGGTGGCCTTGGACAACCTCAAGTATGACGTCAACGACATCAAGCTCT
GGAGGGAGGGCAAGATGGCCTGCCCCTCGCCGCTCGAGTTGACTAAGTACCCGATGTGGG
TGCTGTGCGGTGGTGTGCCGGAGGGCCTCAACCCGCGTAGCCTCAGAGCCGAGATTGGCC
ACAACACCAACGTGTGGGCGGCCAAGGGCACCGCCCTGAGCGGTGGTGACCTGTTGAAGC
TTGAGGGCCTGTCGGGCATCCTAGACCCCAAGGACCCTGTCAACAAGTACTTCCAGACCA
ACAAGGACAACTTCGGTATGGGCAGCCGGCCCTGCTACCACTTGGATCCTGTTGTGCAGG
TGAAGCATCGTTGCAAGTGCAACAAGCAGGAGGCGTGTGGCGAGGAGGAGGCGGCGGTCA
TTAAAGCGGCCGAGGAGGGCAAGATCGCCAATAATTACGTGCTGCCCTGAACGGGGGTGG
TCGTGAAGGAGTGCAAAGCGAACAAGGTTTTGCGCCACTAAGGACCAACCGACTCGTGCT
ACTTCTTATGAAATGGCGCGGTCGCTGATAAGGGGGTTGGCGAGTGCTCCGGCTTGGGTG
CTACATTAGCCTGCATGCGCCAAGAAGTGGCAAAGGTCATGCAGCCGGCCGCCGTGCCGC
TAGGTCCACGGCATGATACAAAGGGTTGTAGTCATGGTGACGGTGGCAAGCTGTGGGTGA
CCGCACGGCCCTAGCCGTTAAAGATCAGGTGCAAGGCTGGTGCTTGTCGTGGTGGCGGTA
ATGGTGGCGAGCTGGCTTCAGAGTCACTAGTACAAGGTAGATAGGAGGATTCACGGCTTG
TGTTAGACCACCCCCATTCACCACGGGCTGCAAATGCCAAgaaatgtggtttcccctcgc
aaggcaaaagcggggccgcaaatgacaagatatatggttcccgccacgtctctagtctga
ggccgcactcgtctacctcatctcccggacaaagccggggtcggttcgtacaggcgcggc
ccgccacgGcatggattcgcgaggccgcttctcgctctggctgatttctccctgccgcct
atttttatacaatagggaattagcaCAGCGGGCTGCAAATGAACGTCTGTGTACGTTTGA
GAACGTTTGTGAACGTTTGTGTTTGAGGCCCGTTTGAGAATGTGTGTGTGGGGGGGTGCC
GGAGTGGTACGTGCAGATGGAGACCCGAGGTGCTATGCAGCGCCAAGTCCGGCGATAGGT
TTGGCCCGATTACATCAGACCCAATAGCTTCGATGCGGTCCCACCGTCTCAGATACTAGA
GATCTACGCATTTGGCCGGTTTGGGAACTTGGGAAATGCCCGTGGAGGCTGGGCAAACCG
GCAAACACTTGGGACTCCCCCCCCAGCATGGGACCCCCCACCCGCGCACACAATGCTATG
GCACACCTTTTTGCTGGACGTGAGAATGTGGGATGTGCCCAAAGTCGGCAGTCACAGTGT
TGTCATGATGGCTGATCATACAGAGAGCAGGGCTCGAGGGATCGGGCGTTGGATATTGGA
GTGGGCATGGCTGGGGAAAGGTCGGACATGAACC