Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre02.g088200.t1.2
CDS Infomation

pacid=30786096 polypeptide=Cre02.g088200.t1.2 locus=Cre02.g088200 ID=Cre02.g088200.t1.2.v5.5 annot-version=v5.6
Sequence

ATGAACCGTTGGAACCTTCTTGCCCTTACCCTGGGGCTGCTGCTGGTGGCAGCGCCCTTC
ACCAAGCACCAGTTTGCTCATGCTTCCGATGAGTATGAGGACGACGAGGAGGACGATGCC
CCCGCCGCCCCTAAGGACGACGACGTCGACGTTACTGTGGTGACCGTCAAGAACTGGGAT
GAGACCGTCAAGAAGTCCAAGTTCGCGCTTGTGGAGTTCTACGCTCCTTGGTGCGGCCAC
TGCAAGACCCTCAAGCCTGAGTACGCTAAGGCTGCCACCGCCCTGAAGGCTGCTGCTCCC
GATGCCCTTATCGCCAAGGTCGACGCCACCCAGGAGGAGTCCCTGGCCCAGAAGTTCGGC
GTGCAGGGCTACCCCACCCTCAAGTGGTTCGTTGATGGCGAGCTGGCTTCTGACTACAAC
GGCCCCCGCGACGCTGATGGCATTGTTGGCTGGGTGAAGAAGAAGACTGGCCCCCCCGCC
GTGACCGTTGAGGACGCCGACAAGCTGAAGTCCCTGGAGGCGGACGCTGAGGTCGTTGTC
GTCGGCTACTTCAAGGCCCTGGAGGGCGAGATCTACGACACCTTCAAGTCCTACGCCGCC
AAGACCGAGGACGTGGTGTTCGTGCAGACCACCAGCGCCGACGTCGCCAAGGCCGCCGGC
CTGGACGCCGTGGACACCGTGTCCGTGGTCAAGAACTTCGCCGGTGAGGACCGCGCCACC
GCCGTCCTGGCCACGGACATCGACACTGACTCCCTGACCGCGTTCGTCAAGTCGGAGAAG
ATGCCCCCCACCATTGAGTTCAACCAGAAGAACTCTGACAAGATCTTCAACAGCGGCATC
AACAAGCAGCTGATTCTGTGGACCACCGCCGACGACCTGAAGGCCGACGCCGAGATCATG
ACTGTGTTCCGCGAGGCCAGCAAGAAGTTCAAGGGCCAGCTGGTGTTCGTGACCGTCAAC
AACGAGGGCGACGGCGCCGACCCCGTCACCAACTTCTTCGGCCTCAAGGGCGCCACCTCG
CCTGTGCTGCTGGGCTTCTTCATGGAGAAGAACAAGAAGTTCCGCATGGAGGGCGAGTTC
ACGGCTGACAACGTGGCTAAGTTCGCCGAGAGCGTGGTGGACGGCACCGCGCAGGCCGTG
CTCAAGTCGGAGGCCATCCCCGAGGACCCCTATGAGGATGGCGTCTACAAGATTGTGGGC
AAGACCGTGGAGTCTGTGGTTCTGGACGAGACCAAGGACGTGCTGCTGGAGGTGTACGCC
CCCTGGTGCGGCCACTGCAAGAAGCTGGAGCCCATCTACAAGAAGCTGGCCAAGCGCTTT
AAGAAGGTGGATTCCGTCATCATCGCCAAGATGGATGGCACTGAGAACGAGCACCCCGAG
ATCGAGGTCAAGGGCTTCCCTACCATCCTGTTCTATCCCGCCGGCAGCGACCGCACCCCC
ATCGTGTTCGAGGGCGGCGACCGCTCGCTCAAGTCCCTGACCAAGTTCATCAAGACCAAC
GCCAAGATCCCGTACGAGCTGCCCAAGAAGGGCTCCGACGGCGACGAGGGCACCTCGGAC
GACAAGGACAAGCCCGCGTCCGACAAGGACGAGCTGTAA

Peptide Sequence

PEP ID

Cre02.g088200.t1.2
PEP Infomation

pacid=30786096 transcript=Cre02.g088200.t1.2 locus=Cre02.g088200 ID=Cre02.g088200.t1.2.v5.5 annot-version=v5.6
Sequence

MNRWNLLALTLGLLLVAAPFTKHQFAHASDEYEDDEEDDAPAAPKDDDVDVTVVTVKNWD
ETVKKSKFALVEFYAPWCGHCKTLKPEYAKAATALKAAAPDALIAKVDATQEESLAQKFG
VQGYPTLKWFVDGELASDYNGPRDADGIVGWVKKKTGPPAVTVEDADKLKSLEADAEVVV
VGYFKALEGEIYDTFKSYAAKTEDVVFVQTTSADVAKAAGLDAVDTVSVVKNFAGEDRAT
AVLATDIDTDSLTAFVKSEKMPPTIEFNQKNSDKIFNSGINKQLILWTTADDLKADAEIM
TVFREASKKFKGQLVFVTVNNEGDGADPVTNFFGLKGATSPVLLGFFMEKNKKFRMEGEF
TADNVAKFAESVVDGTAQAVLKSEAIPEDPYEDGVYKIVGKTVESVVLDETKDVLLEVYA
PWCGHCKKLEPIYKKLAKRFKKVDSVIIAKMDGTENEHPEIEVKGFPTILFYPAGSDRTP
IVFEGGDRSLKSLTKFIKTNAKIPYELPKKGSDGDEGTSDDKDKPASDKDEL*

Transcript Sequence

Transcript ID

Cre02.g088200.t1.2
Transcript Infomation

pacid=30786096 locus=Cre02.g088200 annot-version=v5.6
Sequence

GTAAGTAAGTTCTCCTGAATTCTAGGAGTACGTTTACGCCATGAACCGTTGGAACCTTCT
TGCCCTTACCCTGGGGCTGCTGCTGGTGGCAGCGCCCTTCACCAAGCACCAGTTTGCTCA
TGCTTCCGATGAGTATGAGGACGACGAGGAGGACGATGCCCCCGCCGCCCCTAAGGACGA
CGACGTCGACGTTACTGTGGTGACCGTCAAGAACTGGGATGAGACCGTCAAGAAGTCCAA
GTTCGCGCTTGTGGAGTTCTACGCTCCTTGGTGCGGCCACTGCAAGACCCTCAAGCCTGA
GTACGCTAAGGCTGCCACCGCCCTGAAGGCTGCTGCTCCCGATGCCCTTATCGCCAAGGT
CGACGCCACCCAGGAGGAGTCCCTGGCCCAGAAGTTCGGCGTGCAGGGCTACCCCACCCT
CAAGTGGTTCGTTGATGGCGAGCTGGCTTCTGACTACAACGGCCCCCGCGACGCTGATGG
CATTGTTGGCTGGGTGAAGAAGAAGACTGGCCCCCCCGCCGTGACCGTTGAGGACGCCGA
CAAGCTGAAGTCCCTGGAGGCGGACGCTGAGGTCGTTGTCGTCGGCTACTTCAAGGCCCT
GGAGGGCGAGATCTACGACACCTTCAAGTCCTACGCCGCCAAGACCGAGGACGTGGTGTT
CGTGCAGACCACCAGCGCCGACGTCGCCAAGGCCGCCGGCCTGGACGCCGTGGACACCGT
GTCCGTGGTCAAGAACTTCGCCGGTGAGGACCGCGCCACCGCCGTCCTGGCCACGGACAT
CGACACTGACTCCCTGACCGCGTTCGTCAAGTCGGAGAAGATGCCCCCCACCATTGAGTT
CAACCAGAAGAACTCTGACAAGATCTTCAACAGCGGCATCAACAAGCAGCTGATTCTGTG
GACCACCGCCGACGACCTGAAGGCCGACGCCGAGATCATGACTGTGTTCCGCGAGGCCAG
CAAGAAGTTCAAGGGCCAGCTGGTGTTCGTGACCGTCAACAACGAGGGCGACGGCGCCGA
CCCCGTCACCAACTTCTTCGGCCTCAAGGGCGCCACCTCGCCTGTGCTGCTGGGCTTCTT
CATGGAGAAGAACAAGAAGTTCCGCATGGAGGGCGAGTTCACGGCTGACAACGTGGCTAA
GTTCGCCGAGAGCGTGGTGGACGGCACCGCGCAGGCCGTGCTCAAGTCGGAGGCCATCCC
CGAGGACCCCTATGAGGATGGCGTCTACAAGATTGTGGGCAAGACCGTGGAGTCTGTGGT
TCTGGACGAGACCAAGGACGTGCTGCTGGAGGTGTACGCCCCCTGGTGCGGCCACTGCAA
GAAGCTGGAGCCCATCTACAAGAAGCTGGCCAAGCGCTTTAAGAAGGTGGATTCCGTCAT
CATCGCCAAGATGGATGGCACTGAGAACGAGCACCCCGAGATCGAGGTCAAGGGCTTCCC
TACCATCCTGTTCTATCCCGCCGGCAGCGACCGCACCCCCATCGTGTTCGAGGGCGGCGA
CCGCTCGCTCAAGTCCCTGACCAAGTTCATCAAGACCAACGCCAAGATCCCGTACGAGCT
GCCCAAGAAGGGCTCCGACGGCGACGAGGGCACCTCGGACGACAAGGACAAGCCCGCGTC
CGACAAGGACGAGCTGTAAGCGGCTATCTGAACTACCCCAGGTTTGGAGCGTCTGCTTGC
GCGCTTGCGCTTGCACACTGTGCATGGATGGGAGTTAAGGAGGAGACGGAGCACGGAGGC
TGCGCTCGGTTGGTGGCTTGGAGCACCGGCAGCGCGTGATCCGTCCTGGCAGCAGCAACG
GCGGAGCGGGCGCATACTGGCGCGAGCTGGCGAGCGGCTGTTGCTGGAGAGGATATGCTG
CCGGGCGGGAGGAAGGGCTAGGGGCAGAGATGAGAGCGTTACGGGCTGGCATGCGGGCGC
CCGTGCCTCTCCCTGCGGTGCAGTCCTTGCTAGGAGACGCACGGTTTTGCCAAAGAGGGA
CGCTGTCCACAGCCCTGCGACTGGAAGTCTTCTAGGCCCTGCGGTGGTAGTGGTGTTGGT
ACGGTTGTGTGCATAAGATGAACAACGTTTCTCTCAAGACGAGACTACTAGTATGCTGAC
GGTGTGTGTATGTGGTGGATGGATTGTGCCCCGACCATGAAGAGTGCTGTGTTGCCTCGG
CGCTTCTGTCGCCCTGGATGTGCGTGGTTCCGAACGCTGGAGTCATCTGTTGAGGAGCGA
GGGTGTTGTCGGGTCCGCCCGGCACGGCCGCGTGATGTCCGGATGGGGATTGCGAGCGAG
GGCAACCGCAGCGCAGATAGCGCCGCAGCGGATCGAGCTAGCGCAGGATGATGAGAGCCG
GGCCTTCGCGGCGTGGGATCAGGGAGGAGCCAAGGCGGAGTGCATGCGAGGAAAACAGTG
TGCGGCAAAGAACGGGCTGCAAGAACGCCTTGCGCTTGCAGTGCGTGTCGCAGAGTTCAA
GGGGCATTAAAGGGGTTAGGGGGCTTTCCATGTTATCAGCCCTGCATAGGCTTCGGGGTT
GATAGGCCCGCCTCAGGCCTTGATACAAGCCAGCGCCCTAGGAacaagaagaggtggctc
tcccttgcaagggaaaagtgggctgtgccgccacgccacgtcctccgtctgaggccgaag
gttccgatactagcctcatctcccggacatagccggggtcggtttgtacaggcaccgccc
gccatgctgcacgccgttgcatttcgctagtgctcgtctacacagctcatccgtggacgc
cggtcgactgcctgcaggtgcgcatcggctatgctatccgcgcggtgtggcgtcgcattg
agtctgtgtggtgctatcgccttggccgggcgcccggagcgtgaggaatgcgcgtcagca
aaacatcga