Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g049600.t1.2
CDS Infomation

pacid=30788863 polypeptide=Cre01.g049600.t1.2 locus=Cre01.g049600 ID=Cre01.g049600.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCAGACTATGCTGAATCCCCAGTCAACACTGAAATTGTCATCATACAGGCTTGGACGG
CCAGCCGGCCGGCCTGTGCCTTGCCATGCGACCGCCCGCACTCGGACACGCACACATGCT
GGGAATTCGGACTCCGACAACGTATCTGGGACCTATGAATCAGGCAGTGCAAGCGATAGC
GAGGCTAGCACCAGCGGCGCGCCGAATCCCAACCTGAAGTTGCCGAAAATCGGATACTTC
TCTATTGCGGACACGAAGGCGGAGGTATACTCGCGCGCGGGTGAGAAGTTTGACCCTGCC
AAGAAGGGGGGGCGCTACAAGCCCGAGTTCATCTGGAACACGGACTGGCAGACGGCGTTG
GAGCGCGAGGAGTCGCTACGGCGCAAGCAGGAGGAGGCCAAGAACCGGCCTAAGGAGCCC
ACCACGGGCTTCCTCAGCTTCAGCCGACTGGCTGAGCTCGACCGCATGGATGTGGACCTG
AGCGACGTGCTGGCTCGCAAGCGGCAGGAGGAGGCTGAGCTTAAGGAGGCACTGGCACGC
CAGGTCCAGCTGGGTGCAGGGAACGGCGGCAAGGCCGGCGGTAGCTCCGCCGCCGCCCGC
AAACCGCCCCCCGCCGCCGCACCCTCCGGCAAGGTGGCCACAGCCGCAATGTTCACGCGC
AAGGAGTCGGCCAAGCTCAGCCGCACCAGCCGCTCCTCTGCGCGCACGGCGGTGATTGTG
GAGGTGCCGGCGCTGGACGCCGAGAAGGCCCGGCTGGCGGAAGAGGAGCGCATTCGCTAC
GACGCGCTCAAAGTCGAGCAGCAGCTCTGGACGCTGGCCTTCACGGCCGCAGGCTTCGCC
ATGACTTACACGACCTACACTAAGGATGTGGCGTTCTCGTACCTGGTGGGGGCGCTGGGC
GGCTTCGCCTACCTGCGCCTGCTGAGCAAGTCGGTGGACTCGGTGGGCGGCGAGGGCGGG
CTGGCCAGCGGCGTCAACAGCGTCGCCTCGCAGCCGCGCCTGCTCATCCCCATCATCCTG
GGCCTGGGCTACAACCGATGGAACCAGCTGTACGCGGAGCAGCTGGGCGTGACGCTGGAG
CTGCTGCCCATCCTGGTTGGCTTCTTCACCTACAAGCTGGCGGTCATTACACGGCAGTAC
AAGGATGTGTTTGATGGCAACCTGTAG

Peptide Sequence

PEP ID

Cre01.g049600.t1.2
PEP Infomation

pacid=30788863 transcript=Cre01.g049600.t1.2 locus=Cre01.g049600 ID=Cre01.g049600.t1.2.v5.5 annot-version=v5.6
Sequence

MQTMLNPQSTLKLSSYRLGRPAGRPVPCHATARTRTRTHAGNSDSDNVSGTYESGSASDS
EASTSGAPNPNLKLPKIGYFSIADTKAEVYSRAGEKFDPAKKGGRYKPEFIWNTDWQTAL
EREESLRRKQEEAKNRPKEPTTGFLSFSRLAELDRMDVDLSDVLARKRQEEAELKEALAR
QVQLGAGNGGKAGGSSAAARKPPPAAAPSGKVATAAMFTRKESAKLSRTSRSSARTAVIV
EVPALDAEKARLAEEERIRYDALKVEQQLWTLAFTAAGFAMTYTTYTKDVAFSYLVGALG
GFAYLRLLSKSVDSVGGEGGLASGVNSVASQPRLLIPIILGLGYNRWNQLYAEQLGVTLE
LLPILVGFFTYKLAVITRQYKDVFDGNL*

Transcript Sequence

Transcript ID

Cre01.g049600.t1.2
Transcript Infomation

pacid=30788863 locus=Cre01.g049600 annot-version=v5.6
Sequence

CCTAAACCAGTTGAGCATTGGCCCAGCCCAGACTGTCAGCCTCGAACACGCAAACCAGCT
CCGCAACACACCTCACTTCGCCACGGTTGCTGCTTGCCACGACAACCCAAAATGCAGACT
ATGCTGAATCCCCAGTCAACACTGAAATTGTCATCATACAGGCTTGGACGGCCAGCCGGC
CGGCCTGTGCCTTGCCATGCGACCGCCCGCACTCGGACACGCACACATGCTGGGAATTCG
GACTCCGACAACGTATCTGGGACCTATGAATCAGGCAGTGCAAGCGATAGCGAGGCTAGC
ACCAGCGGCGCGCCGAATCCCAACCTGAAGTTGCCGAAAATCGGATACTTCTCTATTGCG
GACACGAAGGCGGAGGTATACTCGCGCGCGGGTGAGAAGTTTGACCCTGCCAAGAAGGGG
GGGCGCTACAAGCCCGAGTTCATCTGGAACACGGACTGGCAGACGGCGTTGGAGCGCGAG
GAGTCGCTACGGCGCAAGCAGGAGGAGGCCAAGAACCGGCCTAAGGAGCCCACCACGGGC
TTCCTCAGCTTCAGCCGACTGGCTGAGCTCGACCGCATGGATGTGGACCTGAGCGACGTG
CTGGCTCGCAAGCGGCAGGAGGAGGCTGAGCTTAAGGAGGCACTGGCACGCCAGGTCCAG
CTGGGTGCAGGGAACGGCGGCAAGGCCGGCGGTAGCTCCGCCGCCGCCCGCAAACCGCCC
CCCGCCGCCGCACCCTCCGGCAAGGTGGCCACAGCCGCAATGTTCACGCGCAAGGAGTCG
GCCAAGCTCAGCCGCACCAGCCGCTCCTCTGCGCGCACGGCGGTGATTGTGGAGGTGCCG
GCGCTGGACGCCGAGAAGGCCCGGCTGGCGGAAGAGGAGCGCATTCGCTACGACGCGCTC
AAAGTCGAGCAGCAGCTCTGGACGCTGGCCTTCACGGCCGCAGGCTTCGCCATGACTTAC
ACGACCTACACTAAGGATGTGGCGTTCTCGTACCTGGTGGGGGCGCTGGGCGGCTTCGCC
TACCTGCGCCTGCTGAGCAAGTCGGTGGACTCGGTGGGCGGCGAGGGCGGGCTGGCCAGC
GGCGTCAACAGCGTCGCCTCGCAGCCGCGCCTGCTCATCCCCATCATCCTGGGCCTGGGC
TACAACCGATGGAACCAGCTGTACGCGGAGCAGCTGGGCGTGACGCTGGAGCTGCTGCCC
ATCCTGGTTGGCTTCTTCACCTACAAGCTGGCGGTCATTACACGGCAGTACAAGGATGTG
TTTGATGGCAACCTGTAGGGCGCGCAGTGGCGGCGGTGGCGTGGTGGGTGGCGTGGCGTG
GCAGAGGCCCAGCCATGTAGCCGGCCGTTGTTTAGAGGGGATAGGTTTGCGAGCACGGAT
GTGGGCGATTCTGACGATCGGTATACcgtttttgggctgagctcctaagcgcagcgattc
agggggggcgaaggtggtggtggagggcctggcctcactaggagcagcagcagcggtagc
ggccctgggtccggcggcagcggccctgggcccagcagttgcggcgtgcatgtgcgtagc
ggagggggcgagctaggccacgtggaggaagacagcgcggcgtcgcccaacaagcggcgc
cggcgcgcaggttgaggccggccggtgtcttgttagcggtctttgctggcaagcattgca
cagcacagtatgtggtaggccgcagcagggaggagtgttgtggctagaggatttcctgct
gtttgggctgtgcttgtgctgggcggcgggacgtgtgtgactggacgcatggcgcccgtg
cctgtacgaaccgaccccggctatgtccgggagatgaggtagacgcttgcggcctcagac
CTTCGTGTCATCTTCGCTGTGAGCTCTCGGACTGTGGGAGGAAGCCTGACATCACAGGCG
CGTTAAGGGCGTGGTGGTCGGTTCGCAAGTGTGTGTGTTGGTGTGTTGGTGTGGTATGTG
GCTAGTAATTCTGCGTATGATCCAATTACCTATTGGCTGAAGAACCTCACCTGACTGGGG
CCAATTGTGTATTGGCTCGAGGGTCTACAGGGCGCGTACGGTATGCCGGCGTTTGTGAGC
ACCATGTACTTGATGCTCCAACTTGGACTATTACCAGAATTCCTTTTGAGTTCGCGCGGA
TGTCACGTGGGATGCATGATCGACACAGCGACTGTTGCGGCGGGTGCGTGCAGGTGCAAG
CCGGCGCGGGCGCACTTGCGCGTGGTGGAGCCGTGGAGGGGCCAAGGCGGGAATGAGCCT
GACACGGCCGTCCAATGGCATTCGCCGCTCTGGCATTCTGGCAACACATCGTTATCAACC
ATAAATT