Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g047800.t1.1
CDS Infomation

pacid=30788895 polypeptide=Cre01.g047800.t1.1 locus=Cre01.g047800 ID=Cre01.g047800.t1.1.v5.5 annot-version=v5.6
Sequence

ATGCAGACGCTTAGCAAGAACGCTATTAAGGCCTCGCCGCGCCCTGCGGCGCGCATGCCC
GCAAGCGTGCGTCCGTTCACTTCCTCGGTCAAGCCGGTTGTCTCTCGTGTCTCGGTTATT
TCCCATGCGACTCTTGCGGAGACCAAGGCGGTCCCTGTGATGGAGAAGGGCGAGCTAAGC
CAGTTCCCCGGCTCGGCTGGTGTCTACGCCGTTTACGATAAGAACGGCACGCTGCAATAC
ATTGGCCTGTCGCGCAAGGTATCCGCCAGCGTTGCGACTCACATGCAGGAGCTGCCCGAC
CTGACCGGCTCCATCAAGTACAACATCGTCGACGACGCCAGCCGGGAGGGCCTGACGGCC
GCCTGGAAGTCCTGGGTGGAGGAGACCGTGGCTGAGGCCGGCATCATCCCTCCCGGCAAC
GCCCCCGGCGAGACCAAGTGGCAGTCGCGCAGTGTGGCGCGCGCCACCAAGCCCGAGATC
CGCCTCACGGCCGGCAAGCCCATCCAGGGCGTCACCCTCGAGGAGCTCATTGACCGGATA
GTCAAGGAGAACCCGATTGTGGTGTTTGTGAAGGGCACTCGTCAGCAGCCCCAGTGCGGC
TTCAGCTTCCGCATGATCAACATGCTCAACACGCTCAAGGCTGACTTCGAGGTGGTCAAC
GTGCTGGACGAGTTCCACAACCCCGGCCTGAGGGACGCCATCAAGAACTACAGCCAGTGG
CCCACCATCCCCCAGCTTTACATCAGCGGCGAGTTCGTGGGCGGCGCCGACATTGCGGAG
CAGATGGTGGGCACCGGCGAGCTGCAGACGCTGGTGCGCAGCGCCGCGGCCAAGGACCCC
AACTAA

Peptide Sequence

PEP ID

Cre01.g047800.t1.1
PEP Infomation

pacid=30788895 transcript=Cre01.g047800.t1.1 locus=Cre01.g047800 ID=Cre01.g047800.t1.1.v5.5 annot-version=v5.6
Sequence

MQTLSKNAIKASPRPAARMPASVRPFTSSVKPVVSRVSVISHATLAETKAVPVMEKGELS
QFPGSAGVYAVYDKNGTLQYIGLSRKVSASVATHMQELPDLTGSIKYNIVDDASREGLTA
AWKSWVEETVAEAGIIPPGNAPGETKWQSRSVARATKPEIRLTAGKPIQGVTLEELIDRI
VKENPIVVFVKGTRQQPQCGFSFRMINMLNTLKADFEVVNVLDEFHNPGLRDAIKNYSQW
PTIPQLYISGEFVGGADIAEQMVGTGELQTLVRSAAAKDPN*

Transcript Sequence

Transcript ID

Cre01.g047800.t1.1
Transcript Infomation

pacid=30788895 locus=Cre01.g047800 annot-version=v5.6
Sequence

CGTAGCGCACAAAGAATTAATGCAGCGGCAGAGGTCAGCGGTAGCTAGCACAGGGGCGGC
CCGGCACCCATGGTCGCAGGCAGTGACTGAAGCCCGCTCCGCAGCGCGCGGCGTCGCGGA
AGCAGCAGCAGGGACCGACGAAGTGTCCAGCTTGACAGTTCGCATGATTTGCTGAGGCGG
GTGAAGGGCTTCAGCACGTTCAGCTGCCAGCCGTTGGCAGCGGCAAGGGGGGTAGTGAAT
TACGACCGCTCTCCCTGAGGCTCTTCCGGCGCATGCGCCAAGTTCGCGTTCGGCAACTGG
ATGGACTAAGCTTCGGAGCGTTGCCCTCTTGCAACGGGTACTGGACGAGAATGACCTGCC
GCTAGAGCTTGTGACTGTCTGTCCTAATATGCGTGTCAGCCAGCAAACGGCCGCTGATGC
GATTACAGGTCATCCGGCATGGCAGCCTTTGACGTGGCTCGAGAGCAGGCGCGGCTGGGT
CGGGGGCGGGGGGCGCGTGCGGGGCGTGTGCATGTGGGGTACCGTCGCGATCCCTCGGCA
GACTCACCCACAACTCCAAACCCAGCGCAATTACTCCAGAATAGTTAAACTTTGCCTGGA
ACGATGCAGACGCTTAGCAAGAACGCTATTAAGGCCTCGCCGCGCCCTGCGGCGCGCATG
CCCGCAAGCGTGCGTCCGTTCACTTCCTCGGTCAAGCCGGTTGTCTCTCGTGTCTCGGTT
ATTTCCCATGCGACTCTTGCGGAGACCAAGGCGGTCCCTGTGATGGAGAAGGGCGAGCTA
AGCCAGTTCCCCGGCTCGGCTGGTGTCTACGCCGTTTACGATAAGAACGGCACGCTGCAA
TACATTGGCCTGTCGCGCAAGGTATCCGCCAGCGTTGCGACTCACATGCAGGAGCTGCCC
GACCTGACCGGCTCCATCAAGTACAACATCGTCGACGACGCCAGCCGGGAGGGCCTGACG
GCCGCCTGGAAGTCCTGGGTGGAGGAGACCGTGGCTGAGGCCGGCATCATCCCTCCCGGC
AACGCCCCCGGCGAGACCAAGTGGCAGTCGCGCAGTGTGGCGCGCGCCACCAAGCCCGAG
ATCCGCCTCACGGCCGGCAAGCCCATCCAGGGCGTCACCCTCGAGGAGCTCATTGACCGG
ATAGTCAAGGAGAACCCGATTGTGGTGTTTGTGAAGGGCACTCGTCAGCAGCCCCAGTGC
GGCTTCAGCTTCCGCATGATCAACATGCTCAACACGCTCAAGGCTGACTTCGAGGTGGTC
AACGTGCTGGACGAGTTCCACAACCCCGGCCTGAGGGACGCCATCAAGAACTACAGCCAG
TGGCCCACCATCCCCCAGCTTTACATCAGCGGCGAGTTCGTGGGCGGCGCCGACATTGCG
GAGCAGATGGTGGGCACCGGCGAGCTGCAGACGCTGGTGCGCAGCGCCGCGGCCAAGGAC
CCCAACTAAATGGACTGAAACATGTGTGGGGGCTAGCGTGGACCGAGCAGTGTGAGGGGG
CTTAGGGGGAGGAAAGCGCAGTCCGTGGCCACGACGCCCACGAGTGGCTGGTGCGTTGCG
TGGCTGCGGTGGCGAGGCCGCGGTGCCGGCGGCTGTGCTGGAGAAAGATGTGGAGGCGGG
GGCGATGAATTTATATGATTGCTGGCGGAAGCGAGTGGGGGCCCGGGTCTGAGCGGCGCG
GGGCAGCCTGGGCTGGAGCTGCATGACTGGCTGGTGGAGCCGTGGAGGGCAGCAGGACGG
GGGAGAGCGGCTGAGACGAAGTGACAGGACAGGGCTACCGGAGCAGAACGATCACGATGC
ATGGACCATGATAGTGACGCGAGTGTAGCAAGGGTTATCCCAATTTTGTGTGGCGTGGGA
ACTTGTCACTTGTGGTGCCTGTTAGTTGTGAACATCTCCTCCCTGCTCCGAGTCCGCGCA
CTTTGCTGGTCCTGGCCCTGGGACAGTGGAGCCCTGGGCCCTGGGCGTGCATTGCGTGCG
GTCCTACGGAACCAGCCACAACAACTGTCACTGTATTCTTGCCAAGCTTTC