Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g042800.t1.2
CDS Infomation

pacid=30789170 polypeptide=Cre01.g042800.t1.2 locus=Cre01.g042800 ID=Cre01.g042800.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCTGGCTAACAAGACTTCCGTTCGGCAGACTGCCGGCAAGGCCAGCTCGCGCGCACAG
GCCGCTATTCCTCACCTGATCAGCAGCCGTGTGGAGGTTCGCGCCAGCGGTGTGGTTCCC
TTCAGCGGCGTGAATGTGAAGGCAGCCTCCGCCTCCGCGGCGCCCCGCGCCCGCGCCATG
GCCGCCTCCCGCCAGGCGGTGCGCGTGGCCGCGGCTGTGGACGCTGACTACCGCAAGCGC
GAGCCCAAGGACGTGCGCGTGCTGGTGGTGGGCCCCACCGGCTACATCGGCAAGTTCGTG
GTGAAGGAGCTCGTGAGCCGCGGCTACAACGTGGTGGCGTTCGCGCGCGAGAATGCGGGC
ATCAAGGGCAAGATGGGCCGCGAGGATATCGTCAAGGAGTTCCCTGGTGCGGAGGTGCGG
TTCGGCTCTGTGCTGGACCCCGCCTCGCTGCGGGACGTGGCATTCAAGGACCCGGTTGAC
GTGGTGGTCAGCTGCCTGGCCAGCCGCACAGGCGGCAAGAAGGACTCGTGGCTGATCGAC
TACACCGCCACCAAGAACAGCCTGGACGTGGCCCGCGCCTCGGGCGCCAAGCACTTTGTG
CTGCTGTCCGCCATCTGCGTGCAGAAGCCGCTGCTGGAGTTCCAGAAGGCCAAGCTCCAG
TTCGAGTCGGACCTGCAGGCTGCCGGTGACATCACCTATTCCATCGTGCGCCCCACCGCC
TTCTTCAAGTCCATTGCCGGCCAGATCGACATCGTGAAGAAGGGCAACCCCTACGTCATG
TTCGGCGACGGCAACCTGGCAGCCTGCAAGCCCATCAGCGAGGCCGACCTGGCGTCCTTC
ATTGCCGACTGCGTCACCGAGCAGAACAAGGTCAACAAGGTGCTGCCCATCGGCGGCCCC
AGCAAGGCCTTCACGGCCAAGCAGCAGGCCGACCTGCTGTTCAACATCACCGGCCTGCCG
CCCAAGTACTTCCCGGTGCCTGTGGCGCTCATGGACGGCATGATTGGCCTGTTCGACTCC
CTGGCCAAGCTGTTCCCGCAGCTGGAGGACAGCGCCGAATTCGCGCGCATTGGCAAGTAC
TATGCCACCGAGTCCATGCTGGTGTACGACGAGGCGCGGGGCGTGTACCTGGAGGACGAG
ACGCCCGGGTACGGCAAGGACACGCTGGAGGACTTCTTCAGCCGCGCCGTGAAGGAGGGC
CTCCAGGGACAGGAGCTGGGCGACCAGGCCGTGTTCGGACAGCAGTAA

Peptide Sequence

PEP ID

Cre01.g042800.t1.2
PEP Infomation

pacid=30789170 transcript=Cre01.g042800.t1.2 locus=Cre01.g042800 ID=Cre01.g042800.t1.2.v5.5 annot-version=v5.6
Sequence

MLANKTSVRQTAGKASSRAQAAIPHLISSRVEVRASGVVPFSGVNVKAASASAAPRARAM
AASRQAVRVAAAVDADYRKREPKDVRVLVVGPTGYIGKFVVKELVSRGYNVVAFARENAG
IKGKMGREDIVKEFPGAEVRFGSVLDPASLRDVAFKDPVDVVVSCLASRTGGKKDSWLID
YTATKNSLDVARASGAKHFVLLSAICVQKPLLEFQKAKLQFESDLQAAGDITYSIVRPTA
FFKSIAGQIDIVKKGNPYVMFGDGNLAACKPISEADLASFIADCVTEQNKVNKVLPIGGP
SKAFTAKQQADLLFNITGLPPKYFPVPVALMDGMIGLFDSLAKLFPQLEDSAEFARIGKY
YATESMLVYDEARGVYLEDETPGYGKDTLEDFFSRAVKEGLQGQELGDQAVFGQQ*

Transcript Sequence

Transcript ID

Cre01.g042800.t1.2
Transcript Infomation

pacid=30789170 locus=Cre01.g042800 annot-version=v5.6
Sequence

GCCAACATTTTGTTTGCTCTAGGATAGCCACAAAAATGCTGGCTAACAAGACTTCCGTTC
GGCAGACTGCCGGCAAGGCCAGCTCGCGCGCACAGGCCGCTATTCCTCACCTGATCAGCA
GCCGTGTGGAGGTTCGCGCCAGCGGTGTGGTTCCCTTCAGCGGCGTGAATGTGAAGGCAG
CCTCCGCCTccgcggcgccccgcgcccgcgccATGGCCGCCTCCCGCCAGGCGGTGCGCG
TGGCCGCGGCTGTGGACGCTGACTACCGCAAGCGCGAGCCCAAGGACGTGCGCGTGCTGG
TGGTGGGCCCCACCGGCTACATCGGCAAGTTCGTGGTGAAGGAGCTCGTGAGCCGCGGCT
ACAACGTGGTGGCGTTCGCGCGCGAGAATGCGGGCATCAAGGGCAAGATGGGCCGCGAGG
ATATCGTCAAGGAGTTCCCTGGTGCGGAGGTGCGGTTCGGCTCTGTGCTGGACCCCGCCT
CGCTGCGGGACGTGGCATTCAAGGACCCGGTTGACGTGGTGGTCAGCTGCCTGGCCAGCC
GCACAGGCGGCAAGAAGGACTCGTGGCTGATCGACTACACCGCCACCAAGAACAGCCTGG
ACGTGGCCCGCGCCTCGGGCGCCAAGCACTTTGTGCTGCTGTCCGCCATCTGCGTGCAGA
AGCCGCTGCTGGAGTTCCAGAAGGCCAAGCTCCAGTTCGAGTCGGACCTGCAGGCTGCCG
GTGACATCACCTATTCCATCGTGCGCCCCACCGCCTTCTTCAAGTCCATTGCCGGCCAGA
TCGACATCGTGAAGAAGGGCAACCCCTACGTCATGTTCGGCGACGGCAACCTGGCAGCCT
GCAAGCCCATCAGCGAGGCCGACCTGGCGTCCTTCATTGCCGACTGCGTCACCGAGCAGA
ACAAGGTCAACAAGGTGCTGCCCATCGGCGGCCCCAGCAAGGCCTTCACGGCCAAGCAGC
AGGCCGACCTGCTGTTCAACATCACCGGCCTGCCGCCCAAGTACTTCCCGGTGCCTGTGG
CGCTCATGGACGGCATGATTGGCCTGTTCGACTCCCTGGCCAAGCTGTTCCCGCAGCTGG
AGGACAGCGCCGAATTCGCGCGCATTGGCAAGTACTATGCCACCGAGTCCATGCTGGTGT
ACGACGAGGCGCGGGGCGTGTACCTGGAGGACGAGACGCCCGGGTACGGCAAGGACACGC
TGGAGGACTTCTTCAGCCGCGCCGTGAAGGAGGGCCTCCAGGGACAGGAGCTGGGCGACC
AGGCCGTGTTCGGACAGCAGTAAGGAGTATGGCGACTGAACTGCTGCAGCAGCGTGTCGC
TTGCGCGGGCTGGTAGCTAGTACCGTTTGGTCGTCCGCTCGGATACGGACGGTTCTTGGG
GGGTGGCACTCCAGTTCGGAAGACGCGGGGACGTGGAGAAGAGCAGCTTCGCGTTGTTGC
CCGGAAGCGGAGTCTGTTGGCTGAAGTAAAAAGCGTGCGGCCTGGGTCGGCACCTGGGGC
GGAGCGAGGGAGTGCAGGCGGGCCCATGGCGGCGTGGGCCGCGAGTTCAATCGAACAGCG
GAGTTGACTATTTCATTTCGGGGCGCAGATCGTGGGCGCAGATGCTAATGTTGCATGGAG
GGCGCGCACTATTGAGTGCATGAGCTTTGAGTGGAGCGTGCGCGGGCGGATGGCTATGGA
AGGGGGAATGAGCTATGAGTCGGCTGCTGTGCGCCGGTGCTCAGCCGAGACGGCACTCCC
TGAGGCACTCCAAGCGCCTGCAGTACAATTTTGCAGTGGATGTCGAATCGTGTGCCGTAT
AGCAGGTGGAACAATGGAGTTGTGAGTATTGAGCATGCAGTTCTGCAGCCGCAAGAGCTG
AGACGCATGAACTGCATGAACAGAGCCTGACATATGGCCCCATCCGTGTGGGGGCACCGT
GTGTCTCCGTTGCCGCAGCAAAGCACGCAGGGGGCTGACTGTCCGTCGCGTCGAAGCAAT
TTCTTTTGAACGCCGACTGCAATCGTGAGATACCGTTTTCGTTGCTTCGTGCGGGAACGC
GATGAGTGCGAGGGAACGTCAGATGGCACCCGCTGGACAGTGTCAGTCTGCTGGCGCGGA
GGCTGTAAGAACGCAGGGGG