Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g029850.t1.2
CDS Infomation

pacid=30789168 polypeptide=Cre01.g029850.t1.2 locus=Cre01.g029850 ID=Cre01.g029850.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCAGTCTCCGGGCGGGCCATCCACGCTCTTTGCGGGGCTGCAGAGACCCTTCAGCGCA
CGACGTAAGAAGACTGAGGATATGACGGCAGCGGATGCGGGTCAGCAAGGCGCAGAGCAG
CCCAGCGTGAGCGAGGCGACACGGGTTCGCGTTGAAGCGGCAAAACAGTACATTGAAAAC
ATGTACAACTCGCAGCGTCAGGCCATGGCGGAGCGCCATGCACGGCGGAGCGCTGTGGTT
CAGGAGCTGCAGCGTGAGGGGCTGCCGGAGGACCAGAAGCGGCAGATCCTGAGCGAGCTC
GAAAAGCGCGAAAGCGACTTCACGCGGCTGCAGCGGCAGCGCATGACGGCAGAGGACTTT
GAGGCGTTGAGCATTATTGGGCGTGGCGCATTTGGCGAGGTCCGCATTGTGCGGGAGAAG
ACAACAGGCAAGATCATGGCAATGAAGAAGTTGAAGAAGGCGGAGATGCTCAAGCGCGGG
CAGGTTGAGCACGTCAAGGCGGAGCGCAACGTGCTGGCGGAGGTTCAGAACCCCTACATT
GTCAAGCTGTACTACAGCTTCCAAGATGAGGACCACCTCTACCTGGCCATGGAGTACCTG
CCGGGCGGCGACACCATGACGCTGCTCATGCGCAAGGACATCCTCAGCGAGGAGGAGACG
CGCTTTTACATGGCGGAGACCATCCTCGCCATCGAGTCCATCCATAAAGCCGGCTACATC
CACCGCGACATCAAGCCGGACAACTTGCTGCTCACGCGCGACGGGCACGTCAAGCTGAGC
GACTTCGGGCTGTGCAAGCCGGTGGACGTGCAGGCACTGCCCACGCTAGCGGAGGGCGAG
GAGTTCAACGATCCCACGTTGATGCCGTCGACCTCGTTGCGGCCACAGGCGGAGCAGCTC
GCGCACTGGCAGAAGAATCGGCGGCAGCTGGCGTTCTCGACGGTGGGCACGCCCGACTAC
ATCGCGCCCGAGGTGCTGCTGAAGAAGGGCTACGGCATGGAGTGCGACTGGTGGTCGCTG
GGCGCAATCATGTTTGAGATGCTGGTGGGGTACCCGCCGTTCTACTCGGACGAGCCGCTG
ACCACATGCCGCAAGATTGTCAACTGGCGCATGTTCCTGCGCTTCCCGGACGAGGCCCGG
CTATCGCCGGCGGCGCGCGACCTCATCTGCCGGCTCATGTGCGACGTGGAGGAGCGGATA
GGGACGCGCGGCGGCGTGGAGGAGATTAAGAGCCATCCGTTCTTCGCGGGCGTGGACTGG
GTGCATCTGCACCAGACACAGGCACCGTTTGTGCCGCGCGTTGACCACGACCTGGACACC
CAGAACTTTGAGAACTTTGACGAGGAGATGCACCACCACCACGGCGGTCTCGACCGCAGT
GGCAGCGGGCGCAGCAACAAGTGGCTGGCCCAGGCTGACCCCAATTTCATCGGCTACACG
TACAAGAGCTGGGAGGCGGTCACGCCGGGAGAGCAAGGTCTGGCGGCTCTGGCGCTGAAG
AAGAAGTCGGCCAGTCGGCCCAGCCTTACGCAAGTGCAGACTAACCTGCAGTCCATGGCT
CTGGAAGGCGCGGCGGCGCAACACCACCATGCGCTGTGA

Peptide Sequence

PEP ID

Cre01.g029850.t1.2
PEP Infomation

pacid=30789168 transcript=Cre01.g029850.t1.2 locus=Cre01.g029850 ID=Cre01.g029850.t1.2.v5.5 annot-version=v5.6
Sequence

MQSPGGPSTLFAGLQRPFSARRKKTEDMTAADAGQQGAEQPSVSEATRVRVEAAKQYIEN
MYNSQRQAMAERHARRSAVVQELQREGLPEDQKRQILSELEKRESDFTRLQRQRMTAEDF
EALSIIGRGAFGEVRIVREKTTGKIMAMKKLKKAEMLKRGQVEHVKAERNVLAEVQNPYI
VKLYYSFQDEDHLYLAMEYLPGGDTMTLLMRKDILSEEETRFYMAETILAIESIHKAGYI
HRDIKPDNLLLTRDGHVKLSDFGLCKPVDVQALPTLAEGEEFNDPTLMPSTSLRPQAEQL
AHWQKNRRQLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMFEMLVGYPPFYSDEPL
TTCRKIVNWRMFLRFPDEARLSPAARDLICRLMCDVEERIGTRGGVEEIKSHPFFAGVDW
VHLHQTQAPFVPRVDHDLDTQNFENFDEEMHHHHGGLDRSGSGRSNKWLAQADPNFIGYT
YKSWEAVTPGEQGLAALALKKKSASRPSLTQVQTNLQSMALEGAAAQHHHAL*

Transcript Sequence

Transcript ID

Cre01.g029850.t1.2
Transcript Infomation

pacid=30789168 locus=Cre01.g029850 annot-version=v5.6
Sequence

CTGCCTCACGGAGCCGCAGCGCCTGCCTATTCCCCACCTGTAGCTCAAAGAAATCCGCTA
ACATTTAAGAAAGACTACATTTTGATAGAGCTGCTGCGCAGGCGACCTGTTGCAACATTC
CTACAGCTTTGACAGCTCCTGGTCTTCCCTTGTTCGGCCCATTTAGGCTTAACTCTAAGT
GCTCGGAGTCTTTTCTCTCGAACTGCGCATTAGATGCAGGCGCACAAGCGCGTGGCCTTC
TAGAAGTCTATGTTTTTGGTTGCGACCTTGTTACCGCTACCATCTGGATTAGCACTTGCT
ATCTGAAGCATTAGCTAGCTCAGCTGTACACTTGGGGCATTGAGAGGAGGTGCAGGAAAC
TACAAGCAAAATGCAGTCTCCGGGCGGGCCATCCACGCTCTTTGCGGGGCTGCAGAGACC
CTTCAGCGCACGACGTAAGAAGACTGAGGATATGACGGCAGCGGATGCGGGTCAGCAAGG
CGCAGAGCAGCCCAGCGTGAGCGAGGCGACACGGGTTCGCGTTGAAGCGGCAAAACAGTA
CATTGAAAACATGTACAACTCGCAGCGTCAGGCCATGGCGGAGCGCCATGCACGGCGGAG
CGCTGTGGTTCAGGAGCTGCAGCGTGAGGGGCTGCCGGAGGACCAGAAGCGGCAGATCCT
GAGCGAGCTCGAAAAGCGCGAAAGCGACTTCACGCGGCTGCAGCGGCAGCGCATGACGGC
AGAGGACTTTGAGGCGTTGAGCATTATTGGGCGTGGCGCATTTGGCGAGGTCCGCATTGT
GCGGGAGAAGACAACAGGCAAGATCATGGCAATGAAGAAGTTGAAGAAGGCGGAGATGCT
CAAGCGCGGGCAGGTTGAGCACGTCAAGGCGGAGCGCAACGTGCTGGCGGAGGTTCAGAA
CCCCTACATTGTCAAGCTGTACTACAGCTTCCAAGATGAGGACCACCTCTACCTGGCCAT
GGAGTACCTGCCGGGCGGCGACACCATGACGCTGCTCATGCGCAAGGACATCCTCAGCGA
GGAGGAGACGCGCTTTTACATGGCGGAGACCATCCTCGCCATCGAGTCCATCCATAAAGC
CGGCTACATCCACCGCGACATCAAGCCGGACAACTTGCTGCTCACGCGCGACGGGCACGT
CAAGCTGAGCGACTTCGGGCTGTGCAAGCCGGTGGACGTGCAGGCACTGCCCACGCTAGC
GGAGGGCGAGGAGTTCAACGATCCCACGTTGATGCCGTCGACCTCGTTGCGGCCACAGGC
GGAGCAGCTCGCGCACTGGCAGAAGAATCGGCGGCAGCTGGCGTTCTCGACGGTGGGCAC
GCCCGACTACATCGCGCCCGAGGTGCTGCTGAAGAAGGGCTACGGCATGGAGTGCGACTG
GTGGTCGCTGGGCGCAATCATGTTTGAGATGCTGGTGGGGTACCCGCCGTTCTACTCGGA
CGAGCCGCTGACCACATGCCGCAAGATTGTCAACTGGCGCATGTTCCTGCGCTTCCCGGA
CGAGGCCCGGCTATCGCCGGCGGCGCGCGACCTCATCTGCCGGCTCATGTGCGACGTGGA
GGAGCGGATAGGGACGCGCGGCGGCGTGGAGGAGATTAAGAGCCATCCGTTCTTCGCGGG
CGTGGACTGGGTGCATCTGCACCAGACACAGGCACCGTTTGTGCCGCGCGTTGACCACGA
CCTGGACACCCAGAACTTTGAGAACTTTGACGAGGAGATGCACCACCACCACGGCGGTCT
CGACCGCAGTGGCAGCGGGCGCAGCAACAAGTGGCTGGCCCAGGCTGACCCCAATTTCAT
CGGCTACACGTACAAGAGCTGGGAGGCGGTCACGCCGGGAGAGCAAGGTCTGGCGGCTCT
GGCGCTGAAGAAGAAGTCGGCCAGTCGGCCCAGCCTTACGCAAGTGCAGACTAACCTGCA
GTCCATGGCTCTGGAAGGCGCGGCGGCGCAACACCACCATGCGCTGTGATGGCCGCGGGC
TAGACCAGTGTCGCACGTTGCCTGTGCGGGTCAGGAATGGGCGTTGGTGCGGTTTGTGCT
GGCAGCAACCGCTGTCAGCTTCGTTGGAGGTCGAGACACAGGCGCAGACCGGAGGAGTTG
TGGGCGCTACGTGGGGCCTCGGGTTTAGTTTTAATGTTTCATGAGTGCAAGCTGTAATGT
TTGGGGGTCGGAGGAGAGAATGTGAGGTTACGGACATGCATTTCGATTTCTGTGGCGGCT
CCGGATCTCAAGTGCAGTGGAGTGATCTAATAAACGTGGGACACAAGGTACGGCTGGTAG
GCTGGACGAGAACGATGGTCCGATATGGTCGGGCTCAATAAATACTTGGGACAGCAGGAG
GGCTGATAGTGCTGCTGAGGGGGACGCATGGGGAAGTACTAGTGGGTACAAGCCAGGGGG
CCAGCGGCGTTGGGGGCTTAGGATCCATTGTACATTCATTTGACAGACAAGGCACGTAGT
TCTGTAGTAGTCCAATATAAGGCTCCATGCCTTGTCCGTGGGCCGTGTCCTTTGCAAAAT
CGTCGGAGTAAATGAAGGTGCTGGGTTCACCGTGGTGCACCAGGCCGCCCGTGAGGTGTG
CGCGCAACAATAGGCTGCGTCGTCAACAATAGGGTACGTCGGCCACAACTGTGGCCCACA
AAACATTATGTGAGGTGGACGCGAGGCGCGTTGCTGAACAATACGGTATTGCAGATGGCC
CTATTAACGTGGGGGCATGTCGCAACCGTGGAGGACACTGTAACCTGCTCAATGATTCCT
TCTTAGGCTTCAGT