Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g029100.t1.2
CDS Infomation

pacid=30788679 polypeptide=Cre01.g029100.t1.2 locus=Cre01.g029100 ID=Cre01.g029100.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCGCCCACGGCATCGCTTTTTGAGTATGTATCCTCCAAGCTGGATGAGCCACCGCTC
ACGCCAGAAGAGCTGGAGTTCATGGCGGAGCACGAGAAAGTGACGATTGTGCCCAACTTC
ACGCTTAACCTGCCCAACAGCATGCTTACATGCATCGAGGGCACGTACGGCCCGTTCCGA
CCAAACATCCCAGTGGAGGTCCCCCTCTACCTGGCGCTGGCACTCAACCGCCGGAACAAG
TGCCGCATCCAGCCACCCGGTTGGATGGCGCGGGAAAAGCTCAAAGCCGTGCTGGATGAG
GAGCGCACCATCCCGCAGTACTTCCAGCCGGTGCCGCAGTACTATGTGGAGACGGCCAAG
ATGTTGTTCGCGGAGGCGCGGGCCATCTTTGGCACCAACGCCGAGGTCAACGAGATCATG
GACCTAGTGGAGGAGCTGAAGAAGGTGCGCAACAGCAAGATTTTGGACGGCCTGCGCAAG
GTGAGCGGCCCCATCACCGTCAAGCTCAACAACCTCAGCGCCTCGGAGAGCAACAAGATC
CGCCTTCTGTTTGAGAACAGCCTCAACATGTGGCACCAGCTGTCCAAGAACGACAAGGAG
TGGCAGGAGGTCCGGATGACGGGCACCACCGACACGCCCGCGACACTGTAG

Peptide Sequence

PEP ID

Cre01.g029100.t1.2
PEP Infomation

pacid=30788679 transcript=Cre01.g029100.t1.2 locus=Cre01.g029100 ID=Cre01.g029100.t1.2.v5.5 annot-version=v5.6
Sequence

MAPTASLFEYVSSKLDEPPLTPEELEFMAEHEKVTIVPNFTLNLPNSMLTCIEGTYGPFR
PNIPVEVPLYLALALNRRNKCRIQPPGWMAREKLKAVLDEERTIPQYFQPVPQYYVETAK
MLFAEARAIFGTNAEVNEIMDLVEELKKVRNSKILDGLRKVSGPITVKLNNLSASESNKI
RLLFENSLNMWHQLSKNDKEWQEVRMTGTTDTPATL*

Transcript Sequence

Transcript ID

Cre01.g029100.t1.2
Transcript Infomation

pacid=30788679 locus=Cre01.g029100 annot-version=v5.6
Sequence

ACAACCAATTGTTCGTGAACCAGGTCTTGCACAATTACACTCGTCAGCTGCGTCTGTCGG
TTTCCCTACTGCGCGCCTCCCGACCGCATTTCAAGCGCAAGCGCTCAACATAAGGACATC
ATAATCGTAGCTTACACGACACTTAGGCGGACGGCGAGCGCGGGAGACTGTGACGAAGGG
GAGACTCCACAAAGCAAATTGGGCGCGGACACAGCGCACAGCGAGCGCCTTCTTCTTGTG
AGCCGGGGCCATGGCGCCCACGGCATCGCTTTTTGAGTATGTATCCTCCAAGCTGGATGA
GCCACCGCTCACGCCAGAAGAGCTGGAGTTCATGGCGGAGCACGAGAAAGTGACGATTGT
GCCCAACTTCACGCTTAACCTGCCCAACAGCATGCTTACATGCATCGAGGGCACGTACGG
CCCGTTCCGACCAAACATCCCAGTGGAGGTCCCCCTCTACCTGGCGCTGGCACTCAACCG
CCGGAACAAGTGCCGCATCCAGCCACCCGGTTGGATGGCGCGGGAAAAGCTCAAAGCCGT
GCTGGATGAGGAGCGCACCATCCCGCAGTACTTCCAGCCGGTGCCGCAGTACTATGTGGA
GACGGCCAAGATGTTGTTCGCGGAGGCGCGGGCCATCTTTGGCACCAACGCCGAGGTCAA
CGAGATCATGGACCTAGTGGAGGAGCTGAAGAAGGTGCGCAACAGCAAGATTTTGGACGG
CCTGCGCAAGGTGAGCGGCCCCATCACCGTCAAGCTCAACAACCTCAGCGCCTCGGAGAG
CAACAAGATCCGCCTTCTGTTTGAGAACAGCCTCAACATGTGGCACCAGCTGTCCAAGAA
CGACAAGGAGTGGCAGGAGGTCCGGATGACGGGCACCACCGACACGCCCGCGACACTGTA
GAGAGGATACCGTGCACGGCAGCCGAGAGCAGGATGGGAAGCGGGCTGGGATCCATGGCG
ACTTGGCGGGATCGTGCGTACAACTGTGTGTACCGTACGGTATGGGGGCAGGGCTGGGAC
CGACATGACCTTGTGGATGCATTCATTCCTGGTTATTGTTGGATTTTGAAGTTTGGTCTT
CCACGTTGGATGGGATAGAGGGCGTTGTGCCGTGCGGCTCGGGTGTGACCTGGCACTGCC
AGACACATGCGATACAT