Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g028550.t1.2
CDS Infomation

pacid=30788959 polypeptide=Cre01.g028550.t1.2 locus=Cre01.g028550 ID=Cre01.g028550.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGGGCGCTTGCCAAAAGGGTTTAAGAAGAGTGCTGGTAAGCCGCACGAGGTGGAGGAC
GAGGCGGCGCCCGCCGCGGCGCCGGAGCACGAGCATGCGAAGGAGGAGGCCGCCAAGCCC
GCCCACGCTCCGGCACCTGCGGCCCCAGCCCCCAGCAAGCCAGCGGCGAAGGCGGAGGAG
CACGCCGCGCACTCTGACAGCGATGATGACAGTGACGACGGCGGCGAGAAGGGCCCGGAG
ACGCGCGGAAAGATGCTGCAGCGGCACAAGAAGGAGATGGCGGCTCACAAGAAGGTGGTG
CAGAAGCTAGGCAGCAAGAAGAAGGACGAGGCAGCGAAGCTGACGGCAGAGATGGAGGCG
CGTCACGCTCGTGAGCTCAAGGAGCTCGACGCGCGGGAGAAGGCGGCGGCGGCGGCCCCA
GCGGCGGCGACCCCGGCGGCGGTGGCAGCAGGTGCTGGCGCTGCGGCCGAGGCGGACGGA
GCGGCGGAGGCGCTGGATGGGCTGGCGCTGGGAGGCGGGCATAAGAAGCCCACCAAGGCT
CAGAAGCGGAGGGAGAAGCACGCGCAGCAGGAGGCTGAGCGGCAGGCGCGCATTGCCGAG
GAGCTGGCGGCTCTGGGCCCCAGCGACAAGGCGCTGGAGGAGGAGCGGCTGGCCGACCTG
CTGGCGCCGCTGGGGCTGGCCATCCGGGAGATACGGGCGGACGGGCACTGCATGTACCGC
GCGGTGGAGGACCAGCTGGGTCAGGCCGGCGGCGCCGCCTCCGCACCCGACCACCTGGCC
CTGCGCAAGCTGGCAGCGGCGCACATCCGGGCGCACGCGGACGACTTCCTGCCCTTCATC
TTTGACGAGGACGAGAAGGGCGAGCCCGCGGAGCAGCTGGAGGCATACTGCGAGGAGCTG
GAGAGCACGGCGGTGTGGGGCGGCCAGCTGGAGCTGGGGGCGCTGGCGGCGGCGCTGAGG
CGGCAGATCAAGGTGCACGCGCTGGGCATGCCCACCGTCACACTGGGGGACGAGCACGCC
GCCTCCGGGGGCCCGCCGCTGCAGCTGTGCTACCTGCGCCACGCCTTCGGGCTGGGCGAG
CACTACAACAGCGTCAGCCCGCTGGCCAAGGCCCCCGCCGACTCGGAGGATGCGACGTAG

Peptide Sequence

PEP ID

Cre01.g028550.t1.2
PEP Infomation

pacid=30788959 transcript=Cre01.g028550.t1.2 locus=Cre01.g028550 ID=Cre01.g028550.t1.2.v5.5 annot-version=v5.6
Sequence

MGRLPKGFKKSAGKPHEVEDEAAPAAAPEHEHAKEEAAKPAHAPAPAAPAPSKPAAKAEE
HAAHSDSDDDSDDGGEKGPETRGKMLQRHKKEMAAHKKVVQKLGSKKKDEAAKLTAEMEA
RHARELKELDAREKAAAAAPAAATPAAVAAGAGAAAEADGAAEALDGLALGGGHKKPTKA
QKRREKHAQQEAERQARIAEELAALGPSDKALEEERLADLLAPLGLAIREIRADGHCMYR
AVEDQLGQAGGAASAPDHLALRKLAAAHIRAHADDFLPFIFDEDEKGEPAEQLEAYCEEL
ESTAVWGGQLELGALAAALRRQIKVHALGMPTVTLGDEHAASGGPPLQLCYLRHAFGLGE
HYNSVSPLAKAPADSEDAT*

Transcript Sequence

Transcript ID

Cre01.g028550.t1.2
Transcript Infomation

pacid=30788959 locus=Cre01.g028550 annot-version=v5.6
Sequence

CCAATTGCCGATCTTCAAATTAGGTACAGACATACAGGCAGACGACGTACGCTGCGGCAC
GAGTGCACGCGCAACTCCAGTTCTGTGACCTTCCAAACGATACCTGCGTTGCCCCTAGCC
CGGAACCATGGGGCGCTTGCCAAAAGGGTTTAAGAAGAGTGCTGGTAAGCCGCACGAGGT
GGAGGACGAggcggcgcccgccgcggcgccggAGCACGAGCATGCGAAGGAGGAGGCCGC
CAAGCCCGCCCACGCTCCGGCACCTGCGGCCCCAGCCCCCAGCAAGCCAGCGGCGAAGGC
GGAGGAGCACGCCGCGCACTCTGACAGCGATGATGACAGTGACGACGGCGGCGAGAAGGG
CCCGGAGACGCGCGGAAAGATGCTGCAGCGGCACAAGAAGGAGATGGCGGCTCACAAGAA
GGTGGTGCAGAAGCTAGGCAGCAAGAAGAAGGACGAGGCAGCGAAGCTGACGGCAGAGAT
GGAGGCGCGTCACGCTCGTGAGCTCAAGGAGCTCGACGCGCGGGAGAAggcggcggcggc
ggccccagcggcggcgaccccggcggcggtggcagcAGGTGCTGGCGCTGCGGCCGAGGC
GGACGGAGCGGCGGAGGCGCTGGATGGGCTGGCGCTGGGAGGCGGGCATAAGAAGCCCAC
CAAGGCTCAGAAGCGGAGGGAGAAGCACGCGCAGCAGGAGGCTGAGCGGCAGGCGCGCAT
TGCCGAGGAGCTGGCGGCTCTGGGCCCCAGCGACAAGGCGCTGGAGGAGGAGCGGCTGGC
CGACCTGCTGGCGCCGCTGGGGCTGGCCATCCGGGAGATACGGgcggacgggcactgcat
gtaccgcgcggtggaggacCAGCTGGGTCAGGCCGGCGGCGCCGCCTCCGCACCCGACCA
CCTGGCCCTGCGCAAGCTGGCAGCGGCGCACATCCGGGCGCACGCGGACGACTTCCTGCC
CTTCATCTTTGACGAGGACGAGAAGGGCGAGCCCGCGGAGCAGCTGGAGGCATACTGCGA
GGAGCTGGAGAGCACGGCGGTGTGGGGCGGCCAGCTGGAGCTGGGGGCGCTGGCGGCGGC
GCTGAGGCGGCAGATCAAGGTGCACGCGCTGGGCATGCCCACCGTCACACTGGGGGACGA
GCACGCCGCCTCCGGGGGCCCGCCGCTGCAGCTGTGCTACCTGCGCCACGCCTTCGGGCT
GGGCGAGCACTACAACAGCGTCAGCCCGCTGGCCAAGGCCCCCGCCGACTCGGAGGATGC
GACGTAGGATGCGTTGGGGCTGTCCTGTACAGGGGAGGCACCCGACTTGTAGGCTGTCGT
AGGCTGCGGAATGGATGGGTGTGTGTGGGGGTTGTAGATACCAGCCCAGACTAAAGCGAG
CCAAAGAGCGAGGAGGAGAGCGTGGGCGATGCTTTGATCACGGAGGGTGGGTGTTGAGGT
GGTGGGGCCGTGGCGGAGGTGGTGGGGGGGCGGCCTGCGGGGCCATGGGGTTGTGCACGA
ACGTCATGTGCGGCGCATGGTTGCACAGGGTGGCGAGACAAACGCGGTGGCCACTGGAGG
CGCCCAGTTTCCCGCCCAAGGAGGGCTCCGGATGTTACAAAGTCCTGCGACTGGCAGGGT
GTGCGCGCCAAGGCAATGAGGGAGGCTACAGCATGGGCACGCCCCATGCGTATGGATGGC
GGCGTTGAGACGG