Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g025200.t1.2
CDS Infomation

pacid=30789355 polypeptide=Cre01.g025200.t1.2 locus=Cre01.g025200 ID=Cre01.g025200.t1.2.v5.5 annot-version=v5.6
Sequence

ATGAGGCTGGTACTCCTCGCGGTGGTGCTGCTGGTTGGGAGCGGTGTCGCTGCCGCGCAG
CAGGCTTCACCCGCTGCCGACGCACCTGGAATTTTGCGCAAGACGCTTCGCGGTACCTTA
GCGCAAGTGACCCTGGACGACGACGGTGGTGAGCAGTGGGCGATTGTCAGCGAGAGCGAT
GGCACCATCCAGCCCTTTGCCCGCGGCGTGCGCCCCCCGAAGAAGGACAAGAACGGCAAT
GACATCACCGCCGGCGCCGTGGTGGGACTGAGTTGCCCCACCGACTCGACCGGCTCGTGC
ACCTACGTGTCGTCGTCTGACACGACGCTACTGGCGGGCGGCGCCACGCCCGGCGCCGCC
ACCAGCAAGGTGGTGCAGCGCAACCTCATCATCAACATTGACTACGCCTCCTGCAACTAC
TCCGCCAGCCACAACGAGAGCAGCCTGCGCACGCTGTACCTGGGCGCCGCGGGCGATGGC
ACGGGCGGCCACGCGCTCAAGTTCGAGCAGTGCTCGTACGGCGGCCTGACCATGAACGCC
ACAGCATTCACCGTTGTTACCGTACAGCCCAACTGCACCGCGGCGATCCTCGTCAACTGC
TCTTACTCTGGGATCTCTAACGGCGCGGACGCGGCCGCCAAGGCCATTCTGGGCACCACC
GCCTTTTCCTCCTTCACGCACTACACCTACATCCTGCCGCCTGGTTTCGAGAGCATCTGC
GGCTGGTCCGGCCTGGCGCTGCTGCCCGGCAAGCAGACGTGGCTGCAGACCTCCTCGTAC
GGCGTAAGCCGCTGGGCCACCGCCATGCAAGAGGGCATCCACAACTACGGCCTGTGGCAC
TCGTGGCTGGGCACCGCCGAGTACAATGACTATAGCACCTCCATGGGCCGCGGCAACTCC
TGCCCCAACGCGCCCGAGCTGAGCTACATGAAGTGGGCCACGCCCGTGACCGGCGGCTCC
GCGCTCAACGCCTCGCTGCTGCCTGTGGGCCAGGCCGTCACGTTTAACCTGCCCGCCACC
TACCTCACCGGCACTGGCAACTTCCTTCGGGTTGTGCCTGACTGGATCCCCAACTACTTG
TACAACGTGTACATTGCCGTACGCGCGAACAAGATCGGCGACAGCGCCCTCGGCAACGGC
TACGCCAACCGTATCAACGTGCATTACCTCAACGCGTCGCTGGACAATCAACGGTGGAAC
GGCAACTACACCTACCAGTACAAGGACCGCAAGATCACAGTGCTGAACACCACCCAAGTC
AATGTAACCACGGACCTGCCCGACTACAATTTGGTCGTGTACGGCGGCTCCTGGGTCGGC
ACCGACATCATGCGGATGTACATCTGCCGGTACAGCCTCTCGCGTGCCGAGTGCCCGGCC
AGTGCGGCCGTGCTGCAGGCAACGGCGTCGCCCCCGCCCTCGCCGTCTCTGCCCCCGTCC
CCTTCGCCACCCTCCCCTAGCCCTCCGTCTCCCTCGCCGCCTCCTCCGAAGCCCCCGTCC
CCCTCGCCTCCCTCGCCTAGCCCTCCGTCTCCCTCGCCTCCTCCTCCGAAGCCCCCGTCC
CCCTCGCCTCCTTCTCCACCGCCTCCGCCGCCCCCGTCCCCTCCCAAGGTTACCGGCGGC
GGTAACAACAAGAACAAGGGTCGCCGCATGCTGCGGCGGGCTGGACAGCAGTAG

Peptide Sequence

PEP ID

Cre01.g025200.t1.2
PEP Infomation

pacid=30789355 transcript=Cre01.g025200.t1.2 locus=Cre01.g025200 ID=Cre01.g025200.t1.2.v5.5 annot-version=v5.6
Sequence

MRLVLLAVVLLVGSGVAAAQQASPAADAPGILRKTLRGTLAQVTLDDDGGEQWAIVSESD
GTIQPFARGVRPPKKDKNGNDITAGAVVGLSCPTDSTGSCTYVSSSDTTLLAGGATPGAA
TSKVVQRNLIINIDYASCNYSASHNESSLRTLYLGAAGDGTGGHALKFEQCSYGGLTMNA
TAFTVVTVQPNCTAAILVNCSYSGISNGADAAAKAILGTTAFSSFTHYTYILPPGFESIC
GWSGLALLPGKQTWLQTSSYGVSRWATAMQEGIHNYGLWHSWLGTAEYNDYSTSMGRGNS
CPNAPELSYMKWATPVTGGSALNASLLPVGQAVTFNLPATYLTGTGNFLRVVPDWIPNYL
YNVYIAVRANKIGDSALGNGYANRINVHYLNASLDNQRWNGNYTYQYKDRKITVLNTTQV
NVTTDLPDYNLVVYGGSWVGTDIMRMYICRYSLSRAECPASAAVLQATASPPPSPSLPPS
PSPPSPSPPSPSPPPPKPPSPSPPSPSPPSPSPPPPKPPSPSPPSPPPPPPPSPPKVTGG
GNNKNKGRRMLRRAGQQ*

Transcript Sequence

Transcript ID

Cre01.g025200.t1.2
Transcript Infomation

pacid=30789355 locus=Cre01.g025200 annot-version=v5.6
Sequence

CGACTAAAAAACTGCAAAGGCGACGCAGCGACGGCCCAGAGTCCGCATAACTTTCGTCGC
TAAGGAACAGGGCCTCTACTGCAAGGAAGCCCTATCCTCACAATCGTCTGTAGAATGAGG
CTGGTACTCCTCGCGGTGGTGCTGCTGGTTGGGAGCGGTGTCGCTGCCGCGCAGCAGGCT
TCACCCGCTGCCGACGCACCTGGAATTTTGCGCAAGACGCTTCGCGGTACCTTAGCGCAA
GTGACCCTGGACGACGACGGTGGTGAGCAGTGGGCGATTGTCAGCGAGAGCGATGGCACC
ATCCAGCCCTTTGCCCGCGGCGTGCGCCCCCCGAAGAAGGACAAGAACGGCAATGACATC
ACCGCCGGCGCCGTGGTGGGACTGAGTTGCCCCACCGACTCGACCGGCTCGTGCACCTAC
GTGTCGTCGTCTGACACGACGCTACTggcgggcggcgccacgcccggcgccgccACCAGC
AAGGTGGTGCAGCGCAACCTCATCATCAACATTGACTACGCCTCCTGCAACTACTCCGCC
AGCCACAACGAGAGCAGCCTGCGCACGCTGTACCTGGGCGCCGCGGGCGATGGCACGGGC
GGCCACGCGCTCAAGTTCGAGCAGTGCTCGTACGGCGGCCTGACCATGAACGCCACAGCA
TTCACCGTTGTTACCGTACAGCCCAACTGCACCGCGGCGATCCTCGTCAACTGCTCTTAC
TCTGGGATCTCTAACGGCGCGGACGCGGCCGCCAAGGCCATTCTGGGCACCACCGCCTTT
TCCTCCTTCACGCACTACACCTACATCCTGCCGCCTGGTTTCGAGAGCATCTGCGGCTGG
TCCGGCCTGGCGCTGCTGCCCGGCAAGCAGACGTGGCTGCAGACCTCCTCGTACGGCGTA
AGCCGCTGGGCCACCGCCATGCAAGAGGGCATCCACAACTACGGCCTGTGGCACTCGTGG
CTGGGCACCGCCGAGTACAATGACTATAGCACCTCCATGGGCCGCGGCAACTCCTGCCCC
AACGCGCCCGAGCTGAGCTACATGAAGTGGGCCACGCCCGTGACCGGCGGCTCCGCGCTC
AACGCCTCGCTGCTGCCTGTGGGCCAGGCCGTCACGTTTAACCTGCCCGCCACCTACCTC
ACCGGCACTGGCAACTTCCTTCGGGTTGTGCCTGACTGGATCCCCAACTACTTGTACAAC
GTGTACATTGCCGTACGCGCGAACAAGATCGGCGACAGCGCCCTCGGCAACGGCTACGCC
AACCGTATCAACGTGCATTACCTCAACGCGTCGCTGGACAATCAACGGTGGAACGGCAAC
TACACCTACCAGTACAAGGACCGCAAGATCACAGTGCTGAACACCACCCAAGTCAATGTA
ACCACGGACCTGCCCGACTACAATTTGGTCGTGTACGGCGGCTCCTGGGTCGGCACCGAC
ATCATGCGGATGTACATCTGCCGGTACAGCCTCTCGCGTGCCGAGTGCCCGGCCAGTGCG
GCCGTGCTGCAGGCAACGGCGTCGcccccgccctcgccgtctctgcccccgtccccttcg
ccaccctcccctagccctccgtctccctcgccgcctcctccgaagcccccgtccccctcg
cctccctcgcctagccctccgtctccctcgcctcctcctccgaagcccccgtccccctcg
cctccttctccaccgcctccgccgcccccgtccccTCCCAAGGTTACCGGCGGCGGTAAC
AACAAGAACAAGGGTCGCCGCATGCTGCGGCGGGCTGGACAGCAGTAGACAGCGGGCACC
GCCGCATTGGGCGGCCCGTGCAGCTCAACAAACAAACACGTGGTGATTCAGGTCCTGTGA
TTTTGGAGCATCAGGCATTCTTTTCAGGCGCTGAAACGTGCCACACATTGTGCTGATTAT
TAGTCGTATCATATTCATGTAGGTTGCCTGGTTACCGTATGTGGGTTCCCAGGGAGACAC
AAGGGGACACTTTGTTGCGTGCCGACGCGGCGTGTGTGTATCGAAAGTCGGAAATCATTA
GTCGGGAAGCTTATTTCATATACATAATGCAGTGGCCTTCACCAGCTACATGATGAAGAG
ATGGTCTTGCACAAATACATACATAACGCGCCAACGGGTGACGATAGGACACTCATGCAC
AACTCGGCTGCCGCAAGGCAGTGATGGCGCAGGCCGTACGGATGGGACTCGTTTGTTGTG
GAGGTCGCAGTAGTGTGTGCTGGCTACTCAGGCTGACTCGGCGGGCTCGGGTCGTGAAAG
GTCCTCAGGTCGACATGGACAGGGTTGGTGATTCAGCCAGCGGTGATGGTACATGCGGTG
ATGCGGTCACGGTCCAGCTGCACATAGTCACCGGAGTGTTGGACTGGACGATATTGAGAA
ATCCAGAGAGTGAGTGCATACTTGGATgatgcgaccgcaaaggctcccacccctcccctt
cgggggaagggcaactgggcaagccaacCAGTGAGTGCATATTTGGACGGAGGCTTCGCC
GCGGGTGAGACCAGGTGAGACCGAGTTGATTGGGTGTGGGTAGGTCACCTGCGAGCGCTG
GAGAGTCAGGAATCGCAGAGCTCAGAGCTTCGCCCAGGTCGTGGCCTTCGTCATACTAAT
ACGGGATGGCGCATCCGTAGCTACCAGTTGAATGGGGCTGGGGCAGTCTAGGGTAGCTTG
GGCTTGGTGTCGCCACAGGGCGGGACTGGGAATCCCGCAGAAGTGCGTGAGGAGCAGTGG
AAGGGGAGCACTTGAACACTGCAACAGTACTCCCGTCACACCGTTCATTTGTCGGGCTTT
CTGCTTTCGAAACTTTGCGCTCTCGTGCAGTACTATGGCCTCACATGGGGGGACAAGGGG
ATGGGCAGGGGGTTGACCGTGTCACATTGACACCCACCATATCGAGCT