Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g023400.t1.1
CDS Infomation

pacid=30788790 polypeptide=Cre01.g023400.t1.1 locus=Cre01.g023400 ID=Cre01.g023400.t1.1.v5.5 annot-version=v5.6
Sequence

ATGGACTCGGCCTTTGCAGTGGTGGAGGCGATGCAGGTCGCAGCTGCCGGCATGGAGGGA
AGCCGGGACCTGGTGCACCAGGGCCGTGAGCTGCTATCGTCTGCCACGGGATTCAACTGG
TTCCTTATCCTTGTGGCCGCGGTTGTGTCGGCCCTGGTGCTGGCCGGCTGCATATACCTG
CTCGTGGAATACCAGCACCCTGAGGACCGGAACCAGGCATGGGTCCCCAAGATTGTGGTG
GTGATCTCCATGACGCTAGCCATCTGGACGGTGCTCTTATTTCCCCTAGACGTGGCGAAC
ACCCGAGCGTGCGCGCAAAGTATATCGCCCAGCGCGTGCACCTACACGCTGCCCATGCAC
CAGCTGTGGTACGCGTGCTTCATCTCCAACCTGGTGCTGGTGTTCCTCATCATCCCCTTC
ACGCTGTTCTTCTACGAGTCAGACAGCGACTACACGTTCTGCCAGAAGGTGAAGGGCTCG
CTGATGTGGACAATGGGCTTCCTCGTCTTCATCGTCCTCATCATCGTTATTATGTATCTG
CTCATCGGATACGTGGTGTACCCCACGCAACAGCTGACCAGCGGCGTGCGCAGCATGAAC
GTGCTCAAAAACTTGGCCAGCTTCAACAGCAGCGCCTGCATCAAGCCGCTCAAGAGCAAC
CAGACGGAGGCGTCGGTGCCGGACTACCAGTGCTCGGCGTTCTCCACCACCTTCCGCTCC
AGCAGCTGGAAGCTGCGCGTGTCGCTGCCCGTGTACATCATAGCCATCCAGTCGGTGCTG
GGCTGGCTGGTGTTCCTGGTGTTCGCGGGCGTGGGCCTGGTGGCGGGGCCCATAGACTGG
CTGCAGGAGTTCCTTGGCCGTCCAAAGGCGGTGATCACCAAGTCGGAGTACATGCGGAGA
GGGCAGATCATAGCGCAGCGAGCAAAACAAATCATGAACATGCTGACCATGATGCGGCGC
GGCGAGCGCGACCGTCGGTGGCGCAGTAACTTCCAAAAGGTGCAGCGCGAGGTAGCCCTG
TTGGAGGAGGACGAGTACCAGCTGGAGCGGGTGTTCCCACAGGGCGAGGACGGCCAGGTC
CGCTGGGTGCTGTTCATGCTGGGCTTCTACGTGCTGGCGGTCATGGCGGTGGTGGGCTTC
TGCCTCACCTGCATGTGGATCGCGCAGATCATCGCCTACATGCTGCCGCCCGTGCCGCTC
AGCCCGCTGCTCAACGAGATGTTCGTGGCGCTGGACGGCGTGTTCCCGCTGTTCGGCGTG
CTGGCCTTCGCCATCTTCTGCCTCTACCTCATGATCGCGGCAATGAAGGGCAACTTCATG
CTGGGCCTCAACTTCCTGGTGATCAAGCTGTACCCCATGCGGCCGGGCGCCACCATGATG
AGCTCCTTCCTGGTCAACACCGCGCTCATCCTGCTCATGGCGCCGGCCATCGTGCAGTTC
TGCGCGCAGGCGTTTGCTGTGTACGCGGACGGCACCTCCATCTTCGACGTGTTCGGCAAC
CAGGTCATGTACCTGATCGGCCTCAGGTACATCTACAACCTCAACATCTTCCTGTACGCG
ATGCTCGCCATCTGCCTACTCACCGCCATCTTCCTGGCCTTCCGCGGGAAGAAGGTGTGG
AAGCGGCGCAACCCCATGGACGCATACGCCATGATCGACTAA

Peptide Sequence

PEP ID

Cre01.g023400.t1.1
PEP Infomation

pacid=30788790 transcript=Cre01.g023400.t1.1 locus=Cre01.g023400 ID=Cre01.g023400.t1.1.v5.5 annot-version=v5.6
Sequence

MDSAFAVVEAMQVAAAGMEGSRDLVHQGRELLSSATGFNWFLILVAAVVSALVLAGCIYL
LVEYQHPEDRNQAWVPKIVVVISMTLAIWTVLLFPLDVANTRACAQSISPSACTYTLPMH
QLWYACFISNLVLVFLIIPFTLFFYESDSDYTFCQKVKGSLMWTMGFLVFIVLIIVIMYL
LIGYVVYPTQQLTSGVRSMNVLKNLASFNSSACIKPLKSNQTEASVPDYQCSAFSTTFRS
SSWKLRVSLPVYIIAIQSVLGWLVFLVFAGVGLVAGPIDWLQEFLGRPKAVITKSEYMRR
GQIIAQRAKQIMNMLTMMRRGERDRRWRSNFQKVQREVALLEEDEYQLERVFPQGEDGQV
RWVLFMLGFYVLAVMAVVGFCLTCMWIAQIIAYMLPPVPLSPLLNEMFVALDGVFPLFGV
LAFAIFCLYLMIAAMKGNFMLGLNFLVIKLYPMRPGATMMSSFLVNTALILLMAPAIVQF
CAQAFAVYADGTSIFDVFGNQVMYLIGLRYIYNLNIFLYAMLAICLLTAIFLAFRGKKVW
KRRNPMDAYAMID*

Transcript Sequence

Transcript ID

Cre01.g023400.t1.1
Transcript Infomation

pacid=30788790 locus=Cre01.g023400 annot-version=v5.6
Sequence

CATAACACGCATAGCCCTGAGACCGTGAGCACGAGCCCTTTCAAGGAAAAAACAGTTGAA
TCGTCAGACCTACTCTATTCTTACTGTCTGACCAGCTTCCCAGAACGCTAGCTTAATATA
GCTTGTCTCAACAGAGATCCAGCCGGTCGCAGAGGCCCTGTTGTAGAGCGCGGGGACAAC
TTCCACTAGCGCTCGCACGCTATGGACTTTCAGGGGCGCAAGGCCCCGGGGCAGACCTCC
TAGTGCCTTGAGAGTAGTTGCTACCACCACCTAAGCCAGGAGAATGGACTCGGCCTTTGC
AGTGGTGGAGGCGATGCAGGTCGCAGCTGCCGGCATGGAGGGAAGCCGGGACCTGGTGCA
CCAGGGCCGTGAGCTGCTATCGTCTGCCACGGGATTCAACTGGTTCCTTATCCTTGTGGC
CGCGGTTGTGTCGGCCCTGGTGCTGGCCGGCTGCATATACCTGCTCGTGGAATACCAGCA
CCCTGAGGACCGGAACCAGGCATGGGTCCCCAAGATTGTGGTGGTGATCTCCATGACGCT
AGCCATCTGGACGGTGCTCTTATTTCCCCTAGACGTGGCGAACACCCGAGCGTGCGCGCA
AAGTATATCGCCCAGCGCGTGCACCTACACGCTGCCCATGCACCAGCTGTGGTACGCGTG
CTTCATCTCCAACCTGGTGCTGGTGTTCCTCATCATCCCCTTCACGCTGTTCTTCTACGA
GTCAGACAGCGACTACACGTTCTGCCAGAAGGTGAAGGGCTCGCTGATGTGGACAATGGG
CTTCCTCGTCTTCATCGTCCTCATCATCGTTATTATGTATCTGCTCATCGGATACGTGGT
GTACCCCACGCAACAGCTGACCAGCGGCGTGCGCAGCATGAACGTGCTCAAAAACTTGGC
CAGCTTCAACAGCAGCGCCTGCATCAAGCCGCTCAAGAGCAACCAGACGGAGGCGTCGGT
GCCGGACTACCAGTGCTCGGCGTTCTCCACCACCTTCCGCTCCAGCAGCTGGAAGCTGCG
CGTGTCGCTGCCCGTGTACATCATAGCCATCCAGTCGGTGCTGGGCTGGCTGGTGTTCCT
GGTGTTCGCGGGCGTGGGCCTGGTGGCGGGGCCCATAGACTGGCTGCAGGAGTTCCTTGG
CCGTCCAAAGGCGGTGATCACCAAGTCGGAGTACATGCGGAGAGGGCAGATCATAGCGCA
GCGAGCAAAACAAATCATGAACATGCTGACCATGATGCGGCGCGGCGAGCGCGACCGTCG
GTGGCGCAGTAACTTCCAAAAGGTGCAGCGCGAGGTAGCCCTGTTGGAGGAGGACGAGTA
CCAGCTGGAGCGGGTGTTCCCACAGGGCGAGGACGGCCAGGTCCGCTGGGTGCTGTTCAT
GCTGGGCTTCTACGTGCTGGCGGTCATGGCGGTGGTGGGCTTCTGCCTCACCTGCATGTG
GATCGCGCAGATCATCGCCTACATGCTGCCGCCCGTGCCGCTCAGCCCGCTGCTCAACGA
GATGTTCGTGGCGCTGGACGGCGTGTTCCCGCTGTTCGGCGTGCTGGCCTTCGCCATCTT
CTGCCTCTACCTCATGATCGCGGCAATGAAGGGCAACTTCATGCTGGGCCTCAACTTCCT
GGTGATCAAGCTGTACCCCATGCGGCCGGGCGCCACCATGATGAGCTCCTTCCTGGTCAA
CACCGCGCTCATCCTGCTCATGGCGCCGGCCATCGTGCAGTTCTGCGCGCAGGCGTTTGC
TGTGTACGCGGACGGCACCTCCATCTTCGACGTGTTCGGCAACCAGGTCATGTACCTGAT
CGGCCTCAGGTACATCTACAACCTCAACATCTTCCTGTACGCGATGCTCGCCATCTGCCT
ACTCACCGCCATCTTCCTGGCCTTCCGCGGGAAGAAGGTGTGGAAGCGGCGCAACCCCAT
GGACGCATACGCCATGATCGACTAAGAGGCGCACGCGGTAATTAGCTAAGAGGCGGGCGG
GTTTACCAAAGCGGCCTGCGGAAGAGTGCTGGGGGAAGAGTCAGACAGAGTTAGCGAATG
CTTGAGAGGAGTAGAATGTGTTGGAGCGGGGAAGGTAGGGCGTGGGATGACGGGTGGGTC
ATTATGGTGCGGGTGCCGGGTGGGGAGGACATGCACCGACGTTGTTGCGGTTGCGGTTAC
CAAAAGCTGTGACGCTGAGGAGGGCTCGCCGCGCTGCCGTGAAGGACATCAGCGGGCCGG
TGTCGATGCATTCTGTCGTGTGGTATGCCTGCGTGGTGTGCGTGTGTGTGTTACTGGTCG
TGTGTGCGTGTTCACGTGTTTTCGCCCTAGCATAGGTGGTGAGCAACTCTCACTGACATT
ACGATAACCGTAGCATGTGACAAACGTTGCATGGTCTTCTGTGGAACACGTGAAGTATAG
AAATGTGAGCGCCCTGTGACGGGAAACGACGGTGGGCACTTTAACCACCGGATGTGAGCT
TTGGCAGTTGCGATGGCGAAGCGGCGAGCTGCATTGCGGCGCGGCTGGCTGGCTGGGAGT
CGTGGGACGTGATCAACCCTCATACCTTTTAAGATAACGTAGAAAGCCGAGTGTATCAGT
AGCCGGGGGCATGTACATACAATAGGGACACGAGCACGATGAGTATGTCACCCACGATTG
ACGTAACTGCTTAACGGCATGTGCCACACTGCCACGCGTCGCTTTGTAACCTTGGTCAAG
G