Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g020887.t1.2
CDS Infomation

pacid=30788799 polypeptide=Cre01.g020887.t1.2 locus=Cre01.g020887 ID=Cre01.g020887.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGAGACACTTAACGATGTCGCGCTCTGCATGGCATCTCTGGTCGTGCCCGAGGACTCA
ATACCAGCCGGCACCTACTATGATTCAGATACCAACATGTATGTTCCAACCGACGAGCAG
CGACGGGACCTGGGCGCGGTGGTGAGGCGCCTGGCAGGCGCGACCTCGCCGAAGCACTGC
AAGAGGGTCATCATGCCCGGCTCGTTGCGGCGCGTCTACCGGCCGCCAGCCGTGTTCACC
GACACGGCTCTGGGCGAGGAGGTGTGCCTGCTGCTGGAGCGGGCGGCGCGCGGCCGCTTC
GTGGCGGGCTGGGCGTGGCTGGCGGTGCGGCCGCAGCCCGCACAGGAGCCGGAGCAGCTG
CAGGCGGGGTGGCAGAGGCGGCAGAGCCGGCAGGCGGTGGAGGAGGAGGAGGAGCAGGCG
GGGGAGCAGGCGGGGGAGCAGCAGCATGGGGGGGAGGGCCGGCAGGGCGGTCTGCAGGGG
GCCGGCGGGAGGGAGGCGGAGCAGGAGGCGGAGCAGGAGGCGGAGCAGGCTGCTGCTGCT
GCTGGGCCGCGTGAGGAAGGCGACCTCGAGCCAGGGACGCCGGCAGCATGGCCAGCAGCA
GCAGTGGCGGCAGCAGCAGGCGGGGCAGGAGGAGGAGCGGCGGGCGGAGTGGGCACGCCT
GGCCTGTCGCGTGCCGCAGCTGCGAGTGTGGCTGCGAGTGAGGCTACGAGTGAGGCTGCG
GGGCGCGCGGGCGGCCGCCGCCCGTCCGGCGCCGGGGCCTGGTGGGCCCTGCCGCGGCTG
CACCTGGGCGCGCCGCACCCCAACTTCGAGGGGCCGGTGGACCTGCAGGCCGTGGCGCTG
TTCCGGCTGCTGCCCCGCCTGGCTCGCTCCGTGGTGGTGTCTGGCAAGCACCGCCGTGCC
GCCACCGGCGACGACTCGCGCTGCCTACCCGGGCTGGGCTACCCCGCCAGCGACCCCTCA
CACAACGCCGACGACGCCTTCAACGTGGTCAGCATGGCGCTGCTGCGGCTGGAGGCGGAG
GAGGCGGAGGAGGAGGAGCAGGTCGGGGTGGAGGACGAGGCGGGGGAGGAGGAGGGGGAG
GAGGAGGGGCAGGGGGAGGGGGAGCTGCAGGCGGGGGCGGTGATGGAGCCGGCGGTGGAG
CCGCAGGAGGCGGCGGCGGCGGAGCGAGAGCTAACAGGGGTTGCAGGCGATACAGCCGGG
GCCATCCCGCGGCTCCGGCTCCAGCCGCGGCCGTCCGCTGCCGACCCCAGCCAGCCCCAT
GCCCGGCAGCCCCTGCAGCTGCTGCCGCCGCGTGTGGTGTTCCTGCAGCTGCACGGCAAG
GCCGACGCCAGCTGTCCGTACTCCACCGTGTTCGCCTCAGGCGGCTTCGGCCGCAACGCC
AGCGCCTTCTACGGCCGCAGCGACACCGCGGTGGCGGCGGTGGCGCGCGCGCTGGGCCGG
GCGGCGGCGGTGGCGGCGGCGGCAAAGGCGGCCGAGGCTGAGGCTGTGGGGTCGGTGGGG
GGGGATGAGGCGGAAGCGCAGGTGAAGGCCGAGGCGGTGGAGGCGGGGCTGCGTCAGCAG
CAGCAGGGGCTGGGCTGGGCTGTCCATCTGCCGCCTGACGACCCGGCCTGCCCCCTGGCA
GCCACGCGCAACGTGTTTGGGCGTGTGGTCAATGGGGTGCCGCGGTGCGAGTGCTGCGGC
CGACCCGCAGATGAGGGCGGCCCAGTCGCTGCCGCGGAGGAGGGGGCGGCGGAGGAGGGG
GCGGCGGTGGGTGTGCTGGCGGGAGGTGGCCGCTGTGATGTGGGTTCGACGGGGAGTTGG
AGCGGCGGCGGCAGAGGAAGAGGCAGGGGCGGCCGGTCGTGCTTTGGCGCGTTTGTGCAC
GTGGAGCAGGCGGCGGAGGCGCGCGATCCAGAGGCCTGGGGCGTGTGGGCGGAGGCGCTC
GCGGAGGCGGTGGCGGTAGACGGGCGAGGGCGTGGAGGATGA

Peptide Sequence

PEP ID

Cre01.g020887.t1.2
PEP Infomation

pacid=30788799 transcript=Cre01.g020887.t1.2 locus=Cre01.g020887 ID=Cre01.g020887.t1.2.v5.5 annot-version=v5.6
Sequence

METLNDVALCMASLVVPEDSIPAGTYYDSDTNMYVPTDEQRRDLGAVVRRLAGATSPKHC
KRVIMPGSLRRVYRPPAVFTDTALGEEVCLLLERAARGRFVAGWAWLAVRPQPAQEPEQL
QAGWQRRQSRQAVEEEEEQAGEQAGEQQHGGEGRQGGLQGAGGREAEQEAEQEAEQAAAA
AGPREEGDLEPGTPAAWPAAAVAAAAGGAGGGAAGGVGTPGLSRAAAASVAASEATSEAA
GRAGGRRPSGAGAWWALPRLHLGAPHPNFEGPVDLQAVALFRLLPRLARSVVVSGKHRRA
ATGDDSRCLPGLGYPASDPSHNADDAFNVVSMALLRLEAEEAEEEEQVGVEDEAGEEEGE
EEGQGEGELQAGAVMEPAVEPQEAAAAERELTGVAGDTAGAIPRLRLQPRPSAADPSQPH
ARQPLQLLPPRVVFLQLHGKADASCPYSTVFASGGFGRNASAFYGRSDTAVAAVARALGR
AAAVAAAAKAAEAEAVGSVGGDEAEAQVKAEAVEAGLRQQQQGLGWAVHLPPDDPACPLA
ATRNVFGRVVNGVPRCECCGRPADEGGPVAAAEEGAAEEGAAVGVLAGGGRCDVGSTGSW
SGGGRGRGRGGRSCFGAFVHVEQAAEARDPEAWGVWAEALAEAVAVDGRGRGG*

Transcript Sequence

Transcript ID

Cre01.g020887.t1.2
Transcript Infomation

pacid=30788799 locus=Cre01.g020887 annot-version=v5.6
Sequence

GCTGCAGCGTCACATACAAGAACAACAGCCAACAGACGCGCCGGCGCAGAGGCCTGGGGC
TGTAGGCCCAACGCAGGATGTCGCCAGGCAGGGCCTCTGTGGCAACACTACTGCTCCTTG
TAGCCGCGGGCGGCCTCGTCTCGCTACATATTCATTCCTTTACACCTTATTTGGACTTCT
TAGGACTTGATGACCCACTCCGAGTTTGTGCAACGAAAGGATTCGCGAGCATGGAGACAC
TTAACGATGTCGCGCTCTGCATGGCATCTCTGGTCGTGCCCGAGGACTCAATACCAGCCG
GCACCTACTATGATTCAGATACCAACATGTATGTTCCAACCGACGAGCAGCGACGGGACC
TGGGCGCGGTGGTGAGGCGCCTGGCAGGCGCGACCTCGCCGAAGCACTGCAAGAGGGTCA
TCATGCCCGGCTCGTTGCGGCGCGTCTACCGGCCGCCAGCCGTGTTCACCGACACGGCTC
TGGGCGAGGAGGTGTGCCTGCTGCTGGAGCGGGCGGCGCGCGGCCGCTTCGTGGCGGGCT
GGGCGTGGCTGGCGGTGCGGCCGCAGCCCGCACAGGAGCCGGAGCAGCTGCAGGCGGGGT
GGCAGAGGCGGCAGAGCCGGCAGGCGGTggaggaggaggaggagcaggcgggggagcagg
cgggggagCAGCAGCATGGGGGGGAGGGCCGGCAGGGCGGTCTGCAGGGGGCCGGCGGGA
GGGAGGCGGAGCAGGAGGCGGAGCAGGAGGCGGAGCAGGCTGCTGCTGCTGCTGGGCCGC
GTGAGGAAGGCGACCTCGAGCCAGGGACGCCGGCAGCATGGCcagcagcagcagtggcgg
cagcagcagGCGGGGCAGGAGGAGGAGCGGCGGGCGGAGTGGGCACGCCTGGCCTGTCGC
GTGCCGCAGCTGCGAGTGTGGCTGCGAGTGAGGCTACGAGTGAGGCTgcggggcgcgcgg
gcggccgccgcccgtccggcgccggggccTGGTGGGCCCTGCCGCGGCTGCACCTGGGCG
CGCCGCACCCCAACTTCGAGGGGCCGGTGGACCTGCAGgccgtggcgctgttccggctgc
tgccccGCCTGGCTCGCTCCGTGGTGGTGTCTGGCAAGCACCGCCGTGCCGCCACCGGCG
ACGACTCGCGCTGCCTACCCGGGCTGGGCTACCCCGCCAGCGACCCCTCACACAACGCCG
ACGACGCCTTCAACGTGGTCAGCATGGCGCTGCTGCGGCTggaggcggaggaggcggagg
aggaggagcaggtcggggtggaggacgaggcgggggaggaggagggggaggaggaggggc
agggggagggggagCTGCAggcgggggcggtgatggagccggcggtggagccgcaggagg
cggcggcggcggAGCGAGAGCTAACAGGGGTTGCAGGCGATACAGCCGGGGCCATCCCGC
GGCTCCGGCTCCAGCCGCGGCCGTCCGCTGCCGACCCCAGCCAGCCCCATGCCCGGCAGC
CCCTGCAGCTGCTGCCGCCGCGTGTGGTGTTCCTGCAGCTGCACGGCAAGGCCGACGCCA
GCTGTCCGTACTCCACCGTGTTCGCCTCAGGCGGCTTCGGCCGCAACGCCAGCGCCTTCT
ACGGCCGCAGCGACACCgcggtggcggcggtggcgcgcgcgctgggccgggcggcggcgg
tggcggcggcggcaaaggcggcCGAGGCTGAGGCTgtggggtcggtggggggggatgagg
cggaagcgcaggtgaaggccgaggcggtggaggcggggctgcgtcagcagcagcaggggc
tgggctgggCTGTCCATCTGCCGCCTGACGACCCGGCCTGCCCCCTGGCAGCCACGCGCA
ACGTGTTTGGGCGTGTGGTCAATGGGGTGCCGCGGTGCGAGTGCTGCGGCCGACCCGCAG
ATGAGGGCGGCCCAGTCGCTGCCgcggaggagggggcggcggaggagggggcggcggtgg
gtgtgctggcgggaggtggccgctgtgatgtgggttcgacggggagttggagcggcggcg
gcagaggaagaggcaggggcggCCGGTCGTGCTTTGGCGCGTTTGTGCACGTGGAGCAGG
CGGCGGAGGCGCGCGATCCAGAGGCCTGGGGCGTGTGGGCGGAGGCGCTCGCGGAGGCGG
TGGCGGTAGACGGGCGAGGGCGTGGAGGATGAGGAAAGGGCGGTGCGGCTGTGTGCGCAG
GTCCCCGAACACCGCTGGCAAGGTGTGACGAGCTTGCTTCGTCCACCGCTCGCCTGGGCC
GCACTACGCTCCGGCACCTCAATCTGCAGTAATGTATCACGCCCTGGCCGGGTCGTCGGT
CGTTTGGTTGAGGTCAATCGTCTGGCCGTCAACCGACGAGTCGGAGTTT