Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g018800.t1.2
CDS Infomation

pacid=30788470 polypeptide=Cre01.g018800.t1.2 locus=Cre01.g018800 ID=Cre01.g018800.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCGCTGCAGCAGGCTGCGCCGAGGGTGTTTGGCCTCTTGGGGCGTGCCCCTGTCGCT
CTGGGCCAGAGCGGCATTCTGACTGGTAGCAGCGGCTTCAAGAACCAGGGATTCAATGGC
TCCCTGCAGTCTGTGGAGAACCATGTGTATGCCCAGGCCTTCAGCACCTCTTCTCAGGAG
GAGCAGGCTGCTCCCAGCATCCAGGGTGCTTCGGGCATGAAGCTGCCTGGTATGGCTGGT
AGCATGCTGCTGGGCAAGTCGCGCAGCGGCCTGCGCACCGGCTCGATGGTGCCATTCGCT
GCCCAGCAGGCGATGAACATGTCGACGGCCGCCCAGGTGCAGTCGGGCGCCACCGTGAAC
TCCCTGCTGCTCGGCATCTACCGCTTCTGGCGCAGCCAGGCGCCCATGGATAAGCCGCAC
GCGCCCGTGGATGACCGCATGCTCCCCGCCATTGTGGATGCTAGCGACAACCGCGCGGCC
CTCGGCACCTGGGCCACCGCCCTGTTCTGCACCATCCTGGCCTCCAACTTGCTGGGTCTG
GTGCCCACCAACGAGGCGCCCACCTCCGGCCTGGGCTTCGCCACCGGCCTGGGTGTGAGC
GTGTGGGCCACCGCCACCACCCTGGGTCTGTACAAGCTGGGCTTCTCCTTCCCCGGGCAC
TTCATCCCTGGCGGCACCCCCTGGCCCATGGCCTTCATCTTCGTGCCCCTGGAGACCATT
TCGTACACCTTCCGTGCTGTTTCCCTGGGTGTCCGTCTGTGGGTCAACATGCTTGCCGGA
CACACGCTGCTGCACATCCTGACGGGCATGGCGCTGGCGCTGCCCTTCTCGCTGTCGTTC
TTCGCCATGGTGCCCGCCACCTTCGCCGTCGCCTGCCTGCTGTCGGCGCTGGTGGGCCTG
GAGTACCTGGTGGCGGTGCTGCAGTCGGGTGTGTTCTCCATCCTGTCCACCGTCTACGTT
GGCGAGTTCAACAGCGTCAAGCTGGCGGGCCCGCTGGCTAAGGTGGTCAAGAAGGCGCTG
TAA

Peptide Sequence

PEP ID

Cre01.g018800.t1.2
PEP Infomation

pacid=30788470 transcript=Cre01.g018800.t1.2 locus=Cre01.g018800 ID=Cre01.g018800.t1.2.v5.5 annot-version=v5.6
Sequence

MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE
EQAAPSIQGASGMKLPGMAGSMLLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN
SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNRAALGTWATALFCTILASNLLGL
VPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIPGGTPWPMAFIFVPLETI
SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL
EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL*

Transcript Sequence

Transcript ID

Cre01.g018800.t1.2
Transcript Infomation

pacid=30788470 locus=Cre01.g018800 annot-version=v5.6
Sequence

GTGCATTGCGAGACCGGGGCTCGTGTCGCTGAACAAGGCGAAAGCTCGAAAGCGCCCATG
CATCGGGGGCCCGGCAGACACACCCGCTTCACTACTCCAGCATTCTAGACGAAGAATATA
GATTGGATTAACCATGGCGCTGCAGCAGGCTGCGCCGAGGGTGTTTGGCCTCTTGGGGCG
TGCCCCTGTCGCTCTGGGCCAGAGCGGCATTCTGACTGGTAGCAGCGGCTTCAAGAACCA
GGGATTCAATGGCTCCCTGCAGTCTGTGGAGAACCATGTGTATGCCCAGGCCTTCAGCAC
CTCTTCTCAGGAGGAGCAGGCTGCTCCCAGCATCCAGGGTGCTTCGGGCATGAAGCTGCC
TGGTATGGCTGGTAGCATGCTGCTGGGCAAGTCGCGCAGCGGCCTGCGCACCGGCTCGAT
GGTGCCATTCGCTGCCCAGCAGGCGATGAACATGTCGACGGCCGCCCAGGTGCAGTCGGG
CGCCACCGTGAACTCCCTGCTGCTCGGCATCTACCGCTTCTGGCGCAGCCAGGCGCCCAT
GGATAAGCCGCACGCGCCCGTGGATGACCGCATGCTCCCCGCCATTGTGGATGCTAGCGA
CAACCGCGCGGCCCTCGGCACCTGGGCCACCGCCCTGTTCTGCACCATCCTGGCCTCCAA
CTTGCTGGGTCTGGTGCCCACCAACGAGGCGCCCACCTCCGGCCTGGGCTTCGCCACCGG
CCTGGGTGTGAGCGTGTGGGCCACCGCCACCACCCTGGGTCTGTACAAGCTGGGCTTCTC
CTTCCCCGGGCACTTCATCCCTGGCGGCACCCCCTGGCCCATGGCCTTCATCTTCGTGCC
CCTGGAGACCATTTCGTACACCTTCCGTGCTGTTTCCCTGGGTGTCCGTCTGTGGGTCAA
CATGCTTGCCGGACACACGCTGCTGCACATCCTGACGGGCATGGCGCTGGCGCTGCCCTT
CTCGCTGTCGTTCTTCGCCATGGTGCCCGCCACCTTCGCCGTCGCCTGCCTGCTGTCGGC
GCTGGTGGGCCTGGAGTACCTGGTGGCGGTGCTGCAGTCGGGTGTGTTCTCCATCCTGTC
CACCGTCTACGTTGGCGAGTTCAACAGCGTCAAGCTGGCGGGCCCGCTGGCTAAGGTGGT
CAAGAAGGCGCTGTAAGCAGCCTCGGAATGGGACGGCGTGACGCCGTGCGGAGCCTGTGC
AGCTGGCGCAGCCGGGCGGCGAGCAGCGGCTGATGGCGGCCGCGGCTGGCCCACGGAGGG
CGCAGTTGCGGCAGGAGGAGCTGTGGCGGCGGCGTTGCGCGGGGTAGCGTGCAGCAGCGG
GAACAGGGCGCGGCCCGGCGGTGCTGGTCGGCAGATAAACCGGCGCAGTGCTTTCCGGGC
CTGCCTGGCTAGAAGTGCGGGTTGGTGTAGCCAGTAAAAGCATGGGGGTGCGGCTTGCGC
CGGCCGTGGGGTTTCCCGCGGCACTGGTGGCAGCCGGTCGGCTGAGTCGCTTAGATGTTG
CTGTGTCTCGTGTCGGGGCGTCCGTTGCGTGGAGGGGCGGGGCCTGCGCCTGCGCGGGAT
GGCGTCAGTCGAGGAGCTGCGCGGATTAGAGGTACGCGGCGGCAGCGGCGACGTCGATAG
CAGTAGCAGAGGAGCGGAGCTGTGGAGTTGGAGAGCGGCTGCCAGCGGCGCAGGGCGTCG
TCATGTCGCCCGCCTGCGTAATCCCCGGGTGCTTCAACTCCCGGGGAGGGGCGGACGTGG
CGACCGGCGCCCTGCCCGGCTGCGGAGTGCCGCGACTGCTAGAGGCGGTGTGCAGCGGGA
GCGCAGCGAAGTGATggggccccggcgggcggcggcggcgtgcggcgcgcAGAGTACCGG
CGCGGCGGCAAGGGGACCGGCAGCTCCCGGGTCCCCAGCCGCCAGCGTGTGGCGCGTGGC
GCGTGCGCCGCCCGTGTGGGCGGCCGAGAGGAGGGAGCGGCGCGGCAGTGAAACACACTG
CGGCGTACCGACCGAGGCACACGTCGAGAAGTAGACAGCGCAACAGCAACGGCAGCGAAA
ACCTAGCGGTGGGAGGTCCGGAGTTGTGGGGGTTGTGCTGTGGCAGACCGGCCGACGCGC
GCAGGCTGGGGGCGACCACGGGGGGCGGGCATCGCTACCTGTGGCGCGCACCCGGCCAGC
GTGCACCCTTGCCATGCTGGCTTGTGGAGGCGGGGGGAAGAGGTGGAGGCTTATACCTGG
TAGCTTGGCAACCTAGCATCAGCAGGTGACATGAAAGTAGTGGAACTGTAGGTTTTCGTG
TGTGCGGGAAGGGTTGTTTGTGTGTGCGTGCTCCCGGGAGTATCGAGCACACGGGTGGCC
CGAAAGTAGGTTTCAATAGCTTTGCGTGAGGGTTTTGTGGGGGAGGCCTGAAGAGGCTGG
ACACCGAGAGGCCCAGTGATGGCCTGAGGCGAGGAGACTGTAAGCTTCGTCTCAC