Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g016950.t1.2
CDS Infomation

pacid=30788753 polypeptide=Cre01.g016950.t1.2 locus=Cre01.g016950 ID=Cre01.g016950.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCGGGGGGAGGCGCAGCCGCCGCCGCCGCCGGCCCGCTGCCGTACTCCCGGCGGCCG
GAGTGGGCGGACGTGACGCCGGTGTCGCTGCCGGCTGCGGAGAAGGTGGTGGCCATCCAG
TACACGGCCGAGCACGCCGAGGCGCTGGGGTACTGGCGCGCGGTGCTGCAGTCCGGCGAG
CTGAGCGGCCGCGTGCTGGCGCTGACCGCCGACATGATCCGACTCAACCAGGCCGACTAC
ACCGCGTGGCGCGTCAGGTGGCTGTGTGTGCAGCAGCTGGGTGCTGATGCGTTAGGCCCG
GAGCTGGACTTCACGCACGGGGTGATGCTGGAGAACGCCAAGAACTACCAGCTGTGGAAC
CACAGGAGGCTGGTGGCGGGCGCGATCGGCCCCAGCTGCGCCGCGCGTGAGGACGCCTTC
ACGCGTGAGGCCATCATCTTTGACGAGAAGAACTACCACGCCTGGGCGCACAGGCAGGCC
GTCGTCAAGATCACGGGGCTGTGGGAGGCGGAGCTGGCCTTTGCGGACGAGTTCATCGGG
CGGGACGTGCGCAACAACACCGCCTGGAACCAGCGCATGTTCGTGTGGAAGGCCATGGGC
CAGGAGGCGCGGCTGAGGCTCCAGGGTGGAGGCGACGACGCAGGCTGGCTGCGCAGCGAG
CTGGAGTACATTGCGGCGGCCGTACAGAAGGCGCCGCGCAACGAGTCGCCCTGGCGCTAC
CTCACCGGCCTCTTCGCCTCGCTGGAGCCCTGGGCCAGCAGCCCCCGCTCGCTGTCGCGC
TGCGCCGAGGTCCACACGCTGTGCTGCGAGGCGCTGAACGACTGCCCCTCCTGCGGCCCC
GCCTACGACGTGTTGGCGCTGTTCTATGAGGGGCAGGCGGCGCTGTCGGCGGCGCAGGCG
GACACGGCGGCGGCGGCGGCGACGGTGGCGCCGGGGCCGGCGCAGGCGGGCGTGCAGGTG
GTGCTGGCGGGGCGCGTGGCGGCGACGATCATGGCATGCGAGTTGGCGCAGGCGGCGCTG
GACGAGGCGAGTGTGGCCGACCCCATGCGCACACCGTACTGGCTCCACCGCCAGCGCGGA
TTTAACGATGTGGTGGCCTTAGCCACAGGCGTGCTGCGTTCAGCATGA

Peptide Sequence

PEP ID

Cre01.g016950.t1.2
PEP Infomation

pacid=30788753 transcript=Cre01.g016950.t1.2 locus=Cre01.g016950 ID=Cre01.g016950.t1.2.v5.5 annot-version=v5.6
Sequence

MSGGGAAAAAAGPLPYSRRPEWADVTPVSLPAAEKVVAIQYTAEHAEALGYWRAVLQSGE
LSGRVLALTADMIRLNQADYTAWRVRWLCVQQLGADALGPELDFTHGVMLENAKNYQLWN
HRRLVAGAIGPSCAAREDAFTREAIIFDEKNYHAWAHRQAVVKITGLWEAELAFADEFIG
RDVRNNTAWNQRMFVWKAMGQEARLRLQGGGDDAGWLRSELEYIAAAVQKAPRNESPWRY
LTGLFASLEPWASSPRSLSRCAEVHTLCCEALNDCPSCGPAYDVLALFYEGQAALSAAQA
DTAAAAATVAPGPAQAGVQVVLAGRVAATIMACELAQAALDEASVADPMRTPYWLHRQRG
FNDVVALATGVLRSA*

Transcript Sequence

Transcript ID

Cre01.g016950.t1.2
Transcript Infomation

pacid=30788753 locus=Cre01.g016950 annot-version=v5.6
Sequence

TTAAGTGCTTTGAGGCCTGAATGTCGCAGCCGGGCGCCAGAGCGCCACAGTACGCAGCTT
ACTTTACGCCCACCGCAGTGGCTCCCGTTCCTGGCAAGAACCTGTTTGCCGGCACGCAGC
AGCCCTCTGCGCACCTGAAAGAGCTTGTGGCCGAGAACGTTAAGAAGCTCGCGGAGCTGC
GGGCGGAGATTAAGAAGGACGACTGGCTGTTTGAGGCGCCGCGCCACACACTGCGATAGG
GGCAGGCCCTCACCTTCAACGCAGCCGCCGCTCACGCAGCGCCGCACCTAGCAGCAGCGG
GTCAGCACACGCGGACGGCAAGCACGCCTTAGCCGCACAGCCAGCCAAACAGCTTGACAG
CACTTGCTCGCATGTCGGGGGGAGGCGCAgccgccgccgccgccggcccgcTGCCGTACT
CCCGGCGGCCGGAGTGGGCGGACGTGACGCCGGTGTCGCTGCCGGCTGCGGAGAAGGTGG
TGGCCATCCAGTACACGGCCGAGCACGCCGAGGCGCTGGGGTACTGGCGCGCGGTGCTGC
AGTCCGGCGAGCTGAGCGGCCGCGTGCTGGCGCTGACCGCCGACATGATCCGACTCAACC
AGGCCGACTACACCGCGTGGCGCGTCAGGTGGCTGTGTGTGCAGCAGCTGGGTGCTGATG
CGTTAGGCCCGGAGCTGGACTTCACGCACGGGGTGATGCTGGAGAACGCCAAGAACTACC
AGCTGTGGAACCACAGGAGGCTGGTGGCGGGCGCGATCGGCCCCAGCTGCGCCGCGCGTG
AGGACGCCTTCACGCGTGAGGCCATCATCTTTGACGAGAAGAACTACCACGCCTGGGCGC
ACAGGCAGGCCGTCGTCAAGATCACGGGGCTGTGGGAGGCGGAGCTGGCCTTTGCGGACG
AGTTCATCGGGCGGGACGTGCGCAACAACACCGCCTGGAACCAGCGCATGTTCGTGTGGA
AGGCCATGGGCCAGGAGGCGCGGCTGAGGCTCCAGGGTGGAGGCGACGACGCAGGCTGGC
TGCGCAGCGAGCTGGAGTACATTGCGGCGGCCGTACAGAAGGCGCCGCGCAACGAGTCGC
CCTGGCGCTACCTCACCGGCCTCTTCGCCTCGCTGGAGCCCTGGGCCAGCAGCCCCCGCT
CGCTGTCGCGCTGCGCCGAGGTCCACACGCTGTGCTGCGAGGCGCTGAACGACTGCCCCT
CCTGCGGCCCCGCCTACGACGTGTTGGCGCTGTTCTATGAGGGGCAggcggcgctgtcgg
cggcgcaggcggacacggcggcggcggcggcgacggtggcgccggggccggcgCAGGCGG
GCGTGCAGGTGGTGCTGGCGGGGCGCGTGGCGGCGACGATCATGGCATGCGAGTTGGCGC
AGGCGGCGCTGGACGAGGCGAGTGTGGCCGACCCCATGCGCACACCGTACTGGCTCCACC
GCCAGCGCGGATTTAACGATGTGGTGGCCTTAGCCACAGGCGTGCTGCGTTCAGCATGAT
GGTGCAAGGGCCAGGGGAGCTTGTGGCATGGGGCTCTTGGATGGTAATTGTTGGAGGCAG
GTGGTGGAAGTAGGATGGAGAGCGAGAGGGGCGGCGCGGCGCGAAGGAGGGGCAAGCGGG
CAGCCGCGGAGGACGTGTGGACCTCATGGGGGATGG