Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g000600.t1.2
CDS Infomation

pacid=30789603 polypeptide=Cre01.g000600.t1.2 locus=Cre01.g000600 ID=Cre01.g000600.t1.2.v5.5 annot-version=v5.6
Sequence

ATGACTGAGCCGCCACAAAAAATAGCTCGGCGCGAGCAGGCGGGCAAGGCGAAAGAGGAG
GAAACGCCTACTGATGCAAGTATCATTGTACAGTTCCAATCAGCAACGGGTGAAACAACA
GGCCCGCAGCTGGACATCCCGCACACGGTGACGCCTCAGCAGCTGGAGACGCTGCTCAAC
GGGCTGCTGTCAAATGAGGACAAGCTGCCCTACTCCTTCTACATAGAGGAACAGGAGCTG
CTGGGCGAGCTGGGCTCCCACCTGCGGTCCGGCGGCATCAGTGTGGAGAAGGCGCTGCTC
ATCACCTACCAGCCCCAGGCGGTGTTCCGGGTGCGGCCGGTGGCGCGGTGCACCGCCTCC
ATGCCGGGCCACTCCGAGTCCGTGCTGACGGTGCAGTTCAGCCCCTGCGGCACCATGCTG
GCCAGCGGCAGCGGCGACACCACCGTGCGGCTGTGGGACCTCAACACGCAGCTGCCCAAG
ACCGAGTGCAAGGGCCACAAGAACTGGGTGCTGGTGGTGGCCTGGTCGCCGGACGCCAAG
TATGTGGCCAGCGGCGACATGAACGGCTCCATCCTGCTGTGGGAGCCCGGCAGCGGGCGG
CAGCTGGGCGCCTGCAGCGGCCACTCCAAGTGGATCACCTCGCTGTCCTGGCAGCCCGCG
CACAGGCCGGGAGCGCTGCCCAGCAGCCGCTTCGTCAGCGGCAGTAAGGACAACACAGTC
AAGGTGTGGGACGCCGCCACCCGGCGCTGCGTGCTGAGCATGAGCAACCACAGCGCCATG
GTGACGGCTGTGCTGTGGGGCGGCGAGGGCCTCATCTACAGCGCCAGCCGCGACTGCTCC
ATCAGCGCCTGGGACGAGGCGGACGGCAAGCTGGTGCGCGTGTTCAAGGGCCACGGCCAC
TGGGTCAACACGCTGGCGCTCAGCAGCGGCTTCGCGCTGCGCACCGGCGCATTCGACCAC
AACGGCAAGGCGCCCGCAGACGTAGAGGCGGCTCGGGCCAAGGCGGCTGAGCGGTACGCG
GAGGCGACACAGGGCAAGCCCGAGCGGCTGGTGAGCGGCTCCGACGACTTCACGCTGTGC
CTGTACGAGCCCAGTGTGGGCAAGACGCCCATCGCGCGCATGACCGGCCACGTGCAGCTC
ATCAACCAGGTGGTGTTCTCGCCTGACGGCCGCTTCATCCTGTCCGCCTCCTTCGACAAG
TCCGTCAAGCTGTGGGACGGCGCCAAGGGCACCTTCCTGGCCACCCTGCGCGGCCACGTG
GGCCCCGTGTACCAGGTGGCGTGGAGCGCCGACAGCCGCATGTTCGCAAGCGGCAGCAAG
GACTCCACACTCAAGGTGTGGGACGCGCGCACCCGCAAGCTCAAGGTGGACCTGCCCGGC
CACGCCGACGAGGTGTTCACGGTGGACTGGAGCCCCGACGGCGGCAGCGTGGCCAGCGGC
GGCAAGGACCGCGTGCTTAAGCTGTGGAGGCACTGA

Peptide Sequence

PEP ID

Cre01.g000600.t1.2
PEP Infomation

pacid=30789603 transcript=Cre01.g000600.t1.2 locus=Cre01.g000600 ID=Cre01.g000600.t1.2.v5.5 annot-version=v5.6
Sequence

MTEPPQKIARREQAGKAKEEETPTDASIIVQFQSATGETTGPQLDIPHTVTPQQLETLLN
GLLSNEDKLPYSFYIEEQELLGELGSHLRSGGISVEKALLITYQPQAVFRVRPVARCTAS
MPGHSESVLTVQFSPCGTMLASGSGDTTVRLWDLNTQLPKTECKGHKNWVLVVAWSPDAK
YVASGDMNGSILLWEPGSGRQLGACSGHSKWITSLSWQPAHRPGALPSSRFVSGSKDNTV
KVWDAATRRCVLSMSNHSAMVTAVLWGGEGLIYSASRDCSISAWDEADGKLVRVFKGHGH
WVNTLALSSGFALRTGAFDHNGKAPADVEAARAKAAERYAEATQGKPERLVSGSDDFTLC
LYEPSVGKTPIARMTGHVQLINQVVFSPDGRFILSASFDKSVKLWDGAKGTFLATLRGHV
GPVYQVAWSADSRMFASGSKDSTLKVWDARTRKLKVDLPGHADEVFTVDWSPDGGSVASG
GKDRVLKLWRH*

Transcript Sequence

Transcript ID

Cre01.g000600.t1.2
Transcript Infomation

pacid=30789603 locus=Cre01.g000600 annot-version=v5.6
Sequence

GATCGCCGACGATTCCGCTTCCAGCTAGACTTTCGCGCGAAGACACTATGCAATCGGAGC
TGCTGGTTCGAAAGTCACTTATCAGAGAGTTCGTTGTGACAATTCAATCGCAACACTGAG
CAGACTGAAACCTCGTCGTCGCTATCTTTGCACGTCTCTGTTGTTTGTTATTACAGCTTG
TGGTATTTGCGCGTGCATATTTACATCGCTATTAGAGCAGCAGCAGTGAAATGACTGAGC
CGCCACAAAAAATAGCTCGGCGCGAGCAGGCGGGCAAGGCGAAAGAGGAGGAAACGCCTA
CTGATGCAAGTATCATTGTACAGTTCCAATCAGCAACGGGTGAAACAACAGGCCCGCAGC
TGGACATCCCGCACACGGTGACGCCTCAGCAGCTGGAGACGCTGCTCAACGGGCTGCTGT
CAAATGAGGACAAGCTGCCCTACTCCTTCTACATAGAGGAACAGGAGCTGCTGGGCGAGC
TGGGCTCCCACCTGCGGTCCGGCGGCATCAGTGTGGAGAAGGCGCTGCTCATCACCTACC
AGCCCCAGGCGGTGTTCCGGGTGCGGCCGGTGGCGCGGTGCACCGCCTCCATGCCGGGCC
ACTCCGAGTCCGTGCTGACGGTGCAGTTCAGCCCCTGCGGCACCATGCTGGCCAGCGGCA
GCGGCGACACCACCGTGCGGCTGTGGGACCTCAACACGCAGCTGCCCAAGACCGAGTGCA
AgGGCCACAAGAACTGGGTGCTGGTGGTGGCCTGGTCGCCGGACGCCAAGTATGTGGCCA
GCGGCGACATGAACGGCTCCATCCTGCTGTGGGAGCCCGGCAGCGGGCGGCAGCTGGGCG
CCTGCAGCGGCCACTCCAAGTGGATCACCTCGCTGTCCTGGCAGCCCGCGCACAGGCCGG
GAGCGCTGCCCAGCAGCCGCTTCGTCAGCGGCAGTAAGGACAACACAGTCAAGGTGTGGG
ACGCCGCCACCCGGCGCTGCGTGCTGAGCATGAGCAACCACAGCGCCATGGTGACGGCTG
TGCTGTGGGGCGGCGAGGGCCTCATCTACAGCGCCAGCCGCGACTGCTCCATCAGCGCCT
GGGACGAGGCGGACGGCAAGCTGGTGCGCGTGTTCAAGGGCCACGGCCACTGGGTCAACA
CGCTGGCGCTCAGCAGCGGCTTCGCGCTGCGCACCGGCGCATTCGACCACAACGGCAAGG
CGCCCGCAGACGTAGAGGCGGCTCGGGCCAAGGCGGCTGAGCGGTACGCGGAGGCGACAC
AGGGCAAGCCCGAGCGGCTGGTGAGCGGCTCCGACGACTTCACGCTGTGCCTGTACGAGC
CCAGTGTGGGCAAGACGCCCATCGCGCGCATGACCGGCCACGTGCAGCTCATCAACCAGG
TGGTGTTCTCGCCTGACGGCCGCTTCATCCTGTCCGCCTCCTTCGACAAGTCCGTCAAGC
TGTGGGACGGCGCCAAGGGCACCTTCCTGGCCACCCTGCGCGGCCACGTGGGCCCCGTGT
ACCAGGTGGCGTGGAGCGCCGACAGCCGCATGTTCGCAAGCGGCAGCAAGGACTCCACAC
TCAAGGTGTGGGACGCGCGCACCCGCAAGCTCAAGGTGGACCTGCCCGGCCACGCCGACG
AGGTGTTCACGGTGGACTGGAGCCCCGACGGCGGCAGCGTGGCCAGCGGCGGCAAGGACC
GCGTGCTTAAGCTGTGGAGGCACTGAGGCTGAGGCACTGAGATGCGGGTTGAGGGTGATA
GCGCTGTGCCGCGTGTGTACATGTTGGTCATCACAGAGCGCGCGTATGCTTGACATTGTG
CCGAGTCTCTTGCTGTGTGTATGACAGGGCGCCTCGTGTGTTACCAACAGCGGCGGTAGG
GAGGGCAATAGGCAGTGCTAGGAGGCACGTGGGATGGACGGCGGGCGGGTAGGCAGCTGT
ACAAGACATTTTCACGCATGTTGTGTTGCACTTGTAGCTGTAGAGGATGGGAGAAATTGG
CGGGATGGCTAACGAGAGGCGGCTGGGTGTGTGCTGTCCAATACTTATCACTTGCGGCAG
GGGTGCGGCACCAGTGCCTTGCGGCAAAAGTGCGCACATGCAGATGTTAGCGATACGGAT
GGTCGGGAGGCGGATGGGGCGGGGCTTGTCACCGAGGAGGCACGAGGAGGCCTGCCAGAG
CAGGAATCGCTGTTACAGGAAGCGGCCGAGCCGGCGCTCATGTGCTCCGAGCCGGGAGCC
CTGTTTAGTGAGGTGGGGCCCCAGGCCCTCATCAGGGAGCGGGCGGCCGCTTGGCCCGTC
ACACGGTCACACGGCGAGGCGCTGCTTTGTCGTGGCAGCGCCTGTGTGGTGCCGTGGTGG
ACTGGGGGCGCCTCTGTCTGCTTGGTCTCCGGCGCAGTGGCCGTGTGTCGCCGAGGGACG
AGTCTGCCGCTGAAGCAAATGAACGGGTTGGCTGTGCTGCGGCCCGAACGTAAGCCTACA
TGACTGTGAGATGCAAGACTGTAAGGAGCGCTCTCC