Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t05197.3
CDS Infomation

gene=orange1.1t05197
Sequence

ATGGTTATAAATAGAGATAGTGAAAATCAGTTCTTGTTCATTGCAGGAACTCAGCTTAAC
ATTGAAACTAGTGGTTTCGGTAGTGTGATCATTTTGTTGCTCATAATGAGTTACAGTAGC
ACCACTATGGGTTCTGGTAGTCAAAGTAGAAGACCGTTTGAGTTTGGAAGAACTCATGTG
GTTAGGCCCAAGGGGAAGCACCAGGCTACCATAGTTTGGCTGCATGGACTTAGTGATAAA
GGATCAAGTTGGTCCCAGCTCTTGGAAACCCTCCCTCTTCCAAATATCAAGTGGATTTGC
CCTACTGCTCCCACTAGGCCGGTTGCAATATTTGGTGGATATCCTTGTACTGCTTGGTTT
GACGTGGGAGATCTTTCAGAAGATGGTCCTGATGATTTGGAGGGGTTAGATGCTTCAGCA
GCACATGTGGCCAATCTTTTGTCGACAGAACCTGCTGACATCAAACTTGGTATTGGTGGC
TTCAGTATGGGTGCTGCAATAGCACTCTACTCTGCCACATGCCGCATATTAGGACAATAT
GGGAATGGAAACCCATATTCAGTCAACCTTAGTGCAATTGTGGGTTTGAGTGGCTGGCTT
CCATGTTCAAGGACCCTAAAAAGCCGAATGGAAGGATCGCGTGAGGCAACAAGGCGTGCG
GCATCTTTGCCCATCTTGCTCTGCCATGGTTCAGGTGACGATGTGGTTGCATATAAACAC
GGAGAGAGATCAGCACAGACGTTAAATTCTGTTGGATTTCGAGATCTTACATTTAGATGC
TATAATGGGGTAGGTCACTACACAGTCCCTGAAGAGATGGATGAAGTTCGTAACTGGCTC
ACTGCCAGGCTGGAACTAGAGGGTTTACGGGCATGA

Peptide Sequence

PEP ID

orange1.1t05197.3
PEP Infomation
Sequence

MVINRDSENQFLFIAGTQLNIETSGFGSVIILLLIMSYSSTTMGSGSQSRRPFEFGRTHV
VRPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWF
DVGDLSEDGPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQY
GNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYKH
GERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARLELEGLRA*

Transcript Sequence

Transcript ID

orange1.1t05197.3
Transcript Infomation

gene=orange1.1t05197 CDS=654-1529
Sequence

CAAACAAAAAACAAAGTTGTGGGTAAACAAGCAAAGCCAATACAGCTAGCTGAAAGGAAA
GAATAAAAAGCTCATATGCTTTTTCAGTTTTTATTTGAAGGCTGTACCATAACTCTCAAA
CTCCACTTAAGTATTCAATATTATTTATCCCCATTTTTATCAGATCTTCTCCATACTTGT
AAGTTAATTCGTGCTACTTTTATTACCACATTCAACTTGTAAATATTTTAAGTTGTTGTT
TCTTGTGTAATGGGTATCCGTCAATAATGAATATATTATTTAAAAATTGGATTTTTTTTT
GGGTTCTTTTTAGACTTGTGGTTATATTCCTGGGTTGTTGTAGTTGAAGTGCTTTACTTT
CTCTCCACTGTCCACAAGCATAGATTCTTTTCCACTCTCTGCATTGCAAGCTCAAGTTTG
TGTTAACTCATATTGTGCATTGATGATGGCTTGTGGATTCTTTGTTCGTAAAGAGTGACT
GCTTTTCTTTTCTTTTCTTTTCTTTTTGTCCTTTTCTTTATCCCTCTCCTTTCCTTTGTT
GCCTTTCACTTTCTTGATAGTTTCTTTTGAAGGTTTTCAGGCAGTGTAGAACTGGGGTAA
GCAAGAATAGTTGATGTAGATTGATAGGTTACATTCCTTTTTCACCCTTCTATATGGTTA
TAAATAGAGATAGTGAAAATCAGTTCTTGTTCATTGCAGGAACTCAGCTTAACATTGAAA
CTAGTGGTTTCGGTAGTGTGATCATTTTGTTGCTCATAATGAGTTACAGTAGCACCACTA
TGGGTTCTGGTAGTCAAAGTAGAAGACCGTTTGAGTTTGGAAGAACTCATGTGGTTAGGC
CCAAGGGGAAGCACCAGGCTACCATAGTTTGGCTGCATGGACTTAGTGATAAAGGATCAA
GTTGGTCCCAGCTCTTGGAAACCCTCCCTCTTCCAAATATCAAGTGGATTTGCCCTACTG
CTCCCACTAGGCCGGTTGCAATATTTGGTGGATATCCTTGTACTGCTTGGTTTGACGTGG
GAGATCTTTCAGAAGATGGTCCTGATGATTTGGAGGGGTTAGATGCTTCAGCAGCACATG
TGGCCAATCTTTTGTCGACAGAACCTGCTGACATCAAACTTGGTATTGGTGGCTTCAGTA
TGGGTGCTGCAATAGCACTCTACTCTGCCACATGCCGCATATTAGGACAATATGGGAATG
GAAACCCATATTCAGTCAACCTTAGTGCAATTGTGGGTTTGAGTGGCTGGCTTCCATGTT
CAAGGACCCTAAAAAGCCGAATGGAAGGATCGCGTGAGGCAACAAGGCGTGCGGCATCTT
TGCCCATCTTGCTCTGCCATGGTTCAGGTGACGATGTGGTTGCATATAAACACGGAGAGA
GATCAGCACAGACGTTAAATTCTGTTGGATTTCGAGATCTTACATTTAGATGCTATAATG
GGGTAGGTCACTACACAGTCCCTGAAGAGATGGATGAAGTTCGTAACTGGCTCACTGCCA
GGCTGGAACTAGAGGGTTTACGGGCATGA