Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t05022.8
CDS Infomation

gene=orange1.1t05022
Sequence

ATGGCGAAAAAACAAAAACGTGAGAGATTTCAAAACCCGCAGCCATTCCTGCCTTCGAAC
GACGATGACAAATCTGTGGCTTCCTCAAAGAAACGATCCAAGGCTGCCAAGCACCACCAG
AAACAAGATAAAGAGGAGATTGATGAGGATGATGAGAGATTACTGGAGGCATTTCTATCA
AAGGATGCTGGTCCGCAAGTTACACTTGCCGACCTCATCATCAAAAAAATAAAAGAAAAC
GATGCAAACATTGCTTCAGGAGAAACACGGCCTTTGCCCAAGTTGGATGAGTCATTCATA
AATTTGTATAAAGGAGTTGGCGAGTTTCTCAGTAAATACACAGCAGGAAAAATGCCCAAA
GCCTTTAAGCACATCCCTTCAACACAAATGTGGGAGCAGGTCTTGTACCTTACTGAACCC
GAGAAATGGACACCTAATGCAATGTTTCAAGCGACACGAATTTTCTCTTCCAATCTGAAT
GCCAAGAAGGCAGAACGCTTTTACAAGCTTGTTTTGCTCCCTCGAATCAGAGATGATATT
CGAAAGAACAAGAAGCTGCATTTTGCTCTATATCAAGCTTTAAAGAAATCTCTGTACAAA
CCTGCTGCATTTAACAAGGGAATATTGTTCCCGTTGTGTAAGTCAGGGACATGCAACCTT
AGGGAAGCTGTCATCATTGGGAGCGTTATTGAAAAGATCTCCATTCCTATGCTCCATTCA
AGTGTTGCACTACTCAAGCTTGCAGAAATGGAATATTGTGGTACAACAAGTTACTTTATA
AAGCTACTCCTGGAGAAGAAATATGGCTTGCCATATCGTGTAGTTGATGCTATTGTTGCT
CATTTTATGAGATTTCTTGAGGATACAAGAGTAATGCCTGTAATATGGCATCAGTCTCTC
CTTGCATTTGTACAAAGATACAAGAATGAATTGCAGAAAGAAGACAAAGATGACCTCAGA
ATTCTACTTAAAAAGCAAAAACATAAACTAGTTACTCCTGAAATTATTAGGGAGCTTGAT
AGTAGCCGCAATCGTGGTGAAAAGGAAGGAGATCTCGTGTCAATTTCATATCCTATGTCT
GTGATCAATAAAACGATCGAGGAAGATAGGTTTGATATTCCAGATGTACCTATGGAGGAG
GATTGA

Peptide Sequence

PEP ID

orange1.1t05022.8
PEP Infomation
Sequence

MAKKQKRERFQNPQPFLPSNDDDKSVASSKKRSKAAKHHQKQDKEEIDEDDERLLEAFLS
KDAGPQVTLADLIIKKIKENDANIASGETRPLPKLDESFINLYKGVGEFLSKYTAGKMPK
AFKHIPSTQMWEQVLYLTEPEKWTPNAMFQATRIFSSNLNAKKAERFYKLVLLPRIRDDI
RKNKKLHFALYQALKKSLYKPAAFNKGILFPLCKSGTCNLREAVIIGSVIEKISIPMLHS
SVALLKLAEMEYCGTTSYFIKLLLEKKYGLPYRVVDAIVAHFMRFLEDTRVMPVIWHQSL
LAFVQRYKNELQKEDKDDLRILLKKQKHKLVTPEIIRELDSSRNRGEKEGDLVSISYPMS
VINKTIEEDRFDIPDVPMEED*

Transcript Sequence

Transcript ID

orange1.1t05022.8
Transcript Infomation

gene=orange1.1t05022 CDS=68-1213
Sequence

AGAGTATTGAGGGTTTTTCATTCTGTGACTTGGACTCTGTAGCTAGCGACTCATTGAAGG
CCAATCAATGGCGAAAAAACAAAAACGTGAGAGATTTCAAAACCCGCAGCCATTCCTGCC
TTCGAACGACGATGACAAATCTGTGGCTTCCTCAAAGAAACGATCCAAGGCTGCCAAGCA
CCACCAGAAACAAGATAAAGAGGAGATTGATGAGGATGATGAGAGATTACTGGAGGCATT
TCTATCAAAGGATGCTGGTCCGCAAGTTACACTTGCCGACCTCATCATCAAAAAAATAAA
AGAAAACGATGCAAACATTGCTTCAGGAGAAACACGGCCTTTGCCCAAGTTGGATGAGTC
ATTCATAAATTTGTATAAAGGAGTTGGCGAGTTTCTCAGTAAATACACAGCAGGAAAAAT
GCCCAAAGCCTTTAAGCACATCCCTTCAACACAAATGTGGGAGCAGGTCTTGTACCTTAC
TGAACCCGAGAAATGGACACCTAATGCAATGTTTCAAGCGACACGAATTTTCTCTTCCAA
TCTGAATGCCAAGAAGGCAGAACGCTTTTACAAGCTTGTTTTGCTCCCTCGAATCAGAGA
TGATATTCGAAAGAACAAGAAGCTGCATTTTGCTCTATATCAAGCTTTAAAGAAATCTCT
GTACAAACCTGCTGCATTTAACAAGGGAATATTGTTCCCGTTGTGTAAGTCAGGGACATG
CAACCTTAGGGAAGCTGTCATCATTGGGAGCGTTATTGAAAAGATCTCCATTCCTATGCT
CCATTCAAGTGTTGCACTACTCAAGCTTGCAGAAATGGAATATTGTGGTACAACAAGTTA
CTTTATAAAGCTACTCCTGGAGAAGAAATATGGCTTGCCATATCGTGTAGTTGATGCTAT
TGTTGCTCATTTTATGAGATTTCTTGAGGATACAAGAGTAATGCCTGTAATATGGCATCA
GTCTCTCCTTGCATTTGTACAAAGATACAAGAATGAATTGCAGAAAGAAGACAAAGATGA
CCTCAGAATTCTACTTAAAAAGCAAAAACATAAACTAGTTACTCCTGAAATTATTAGGGA
GCTTGATAGTAGCCGCAATCGTGGTGAAAAGGAAGGAGATCTCGTGTCAATTTCATATCC
TATGTCTGTGATCAATAAAACGATCGAGGAAGATAGGTTTGATATTCCAGATGTACCTAT
GGAGGAGGATTGAGTATCTATGACTACCAATGTCGTCAATTGCCTGGTTCCTGGTGCAGG
TAGCCATCTGGGATTATTGAAGCGATGACTTTTGACATATGTTCCTTTGAGATAAATGCA
GTTTTTGTGTTCGTAAGTGTGCAGTAAATGTGGACGCAAATAGGTCCAGTTTACAATCAA
GTTTTAGTCTTGTTTGATTAGAAAATTGATCATTTGTTTTTCCCCCCAAATCTGATTGTT
GTAACACTAAGAAATCTCATGTATTTATAATTTTTGCTCGTTTAGACTGTTCTTAGCTTA
GCCACATGGTTCTCCCATAAATTTAGAGTCCCCTTTTGGTTAATATGAAGCATTTGTTTG
TCTGAAGTATTTTCTGTTCTTTTGCAAATTTGTATTATAA