Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t05013.1
CDS Infomation

gene=orange1.1t05013
Sequence

ATGGAATGTGCCACCACCACTAGGCCCTCAAAACCGTCTTCTAACATATCCGATATCGTC
TCCAAATTTGCAAAAGTTTGCAAATTGAGATCCATTGGTGTTTTCTGCTCTGAGAATCAC
TCCAATCTCAGAAACAATACTATCTCGGTGAGTAAAGATGGCAGTGAGAATACTTCTCAA
GAGACTGAATGTGGTGGCATCAAAATCCATCCTCAGCCTGTTGACCTTCCTTGTAAAAGC
AATGTTTGCGAAGATGTGGAGATTATAAAGTTATTTGATATAGTTTCGGGTTTGAAATTA
GCTTATGTTCAGCTACAGGAAGCTCATATTCCCTATGACCCGGAAAAGATTATAGCTGCC
AATGAGCTTGTTGTCGCTGAGCTTGAAGCACTTTGCAAAATCAAGCATATGTATAAGGAG
AAGAAGCTCAAAAATGTTAAGCTGAAATCATCTCGTTCTGATCTTCTAAAAGCAGAGGGT
GAGGTCGATGAGAAGATATCAGAGGTGTTGAAGCAGAATGTGAAAGCTAAAGACTCTGAG
ATTTTCCATTTGCGACAAAAGCACCAAGATTTAGATTTGGGGAATGCAATTCTGCTTGAA
AAGATAAGGCAAGAATGTCTTCAAAGAAAGAGTGTGAGAGTTTGGAACGTTAATGTGTTT
GAGGATAGCTTCAAGGCAGCCTCAAAATCCATCCATGATTTTGCAAAGCCGGTGATTAGC
TTGATGAAAGCTTCAGGTTGGAATTTGGACCTGGCAGCAAATTCGATTGAAGATGCTGTT
GTGTACAGCAAAAGATGCCACAAAAAGTATGCATTTGAAGCCTATATTGCACGAAGGATG
TTTAATAAGATGTCTCTGCAGTCATATGATGTGGATGATATTATGAGATTTGATGAGCCA
TTTGATTCCCTGATAATTCATCCGGATTCAAATTTTGCCAAATTTTGCAGAGAAAAGTAT
CTTTTAGTTGTTCACCCACAGATGGAAGCTTCATTCTTTGGGAATTTGGACCAGAGGACT
TTTGTATTGAGTGGCAAGCATCCGAGGACACCATTCTACCAAATATTTGCAAAGATGGCA
AAATGGGTTTGGATTTTACTCGGGATTGCATCCTCAATTGATCCCAAAGCAAGGTTATTT
GTTGCCAATCGCGGATGCCAATTCTCGGACGTATACATGCAATCTGTCGAGGAACCCTAT
GAAGGTGCTTCTGGGTTTGGTGAAGCGCAAACCAATTACAAAGTTGAATTCATGGTAATG
CCTGGGTTTAAAATTGGAGAAATATTGGTAAAATCTCAGGTTTATCTTTCAAGAATGAAG
TAG

Peptide Sequence

PEP ID

orange1.1t05013.1
PEP Infomation
Sequence

MECATTTRPSKPSSNISDIVSKFAKVCKLRSIGVFCSENHSNLRNNTISVSKDGSENTSQ
ETECGGIKIHPQPVDLPCKSNVCEDVEIIKLFDIVSGLKLAYVQLQEAHIPYDPEKIIAA
NELVVAELEALCKIKHMYKEKKLKNVKLKSSRSDLLKAEGEVDEKISEVLKQNVKAKDSE
IFHLRQKHQDLDLGNAILLEKIRQECLQRKSVRVWNVNVFEDSFKAASKSIHDFAKPVIS
LMKASGWNLDLAANSIEDAVVYSKRCHKKYAFEAYIARRMFNKMSLQSYDVDDIMRFDEP
FDSLIIHPDSNFAKFCREKYLLVVHPQMEASFFGNLDQRTFVLSGKHPRTPFYQIFAKMA
KWVWILLGIASSIDPKARLFVANRGCQFSDVYMQSVEEPYEGASGFGEAQTNYKVEFMVM
PGFKIGEILVKSQVYLSRMK*

Transcript Sequence

Transcript ID

orange1.1t05013.1
Transcript Infomation

gene=orange1.1t05013 CDS=758-2080
Sequence

ACTTCTTTTCACTAAAACAGTATTATATAATCTTAATGTTTTTCAAAATTAACATCATCT
CTCTTTCAAATAAAACACTAAAATGCCTGCTTAACAAAATGATCCTTTAAATAAATGATT
TCTTTAGCACAAGAATCGATACTGCTGAGCATTTACTACTCTCGTCTTCAGCCAAACCCA
GAAACCTTGAAACCATCGTCTGAGATCAGATACTAGAAGGGCCAAAAACTTAGTAATTAA
ATTCAAGTGGGTTGTTTTTCCTTTTTGCTAATCCAAATGCTGTTTGGTTCGTTCTTTAAA
TTTTAAAGCACAAAAATTGTTTGTTTATTTGCTTTGCATCGTGTTTCTTTTTTGTTGAAT
GTTTTGTACTTTTAATGTTGTTAAAGTTTCAATCCTGTGCATATTTTGTTGGTTGGTTTT
CACTGAAATCACTTTGTGTTTGTTGAGTGTTTTGTTGGGGTTTTAGCATAAAGGTTAGTA
CTTTTAATTAGTTTGAATCTATTTATTCTCTTTTGATTTGGAATTGGGGCCTGTTTTATT
TATTTTAATTAGCCTTACAGGACATAACAGTAAGACACTAGCTGAAACCCTAGTTCATTT
TCTATAATCTGGGTTTGCACTTGCAGGGTTTAAGGCACTTGAGGTACTGTATTGGATCCC
ATATCCATTCTAGTCCCATTTTAAATTTTTGGTATTTGTAGTGGCTAAATCCATTTACAT
TAGATCTTTTATTGGTTAGGGAATTGATCTTTAAAGAATGGAATGTGCCACCACCACTAG
GCCCTCAAAACCGTCTTCTAACATATCCGATATCGTCTCCAAATTTGCAAAAGTTTGCAA
ATTGAGATCCATTGGTGTTTTCTGCTCTGAGAATCACTCCAATCTCAGAAACAATACTAT
CTCGGTGAGTAAAGATGGCAGTGAGAATACTTCTCAAGAGACTGAATGTGGTGGCATCAA
AATCCATCCTCAGCCTGTTGACCTTCCTTGTAAAAGCAATGTTTGCGAAGATGTGGAGAT
TATAAAGTTATTTGATATAGTTTCGGGTTTGAAATTAGCTTATGTTCAGCTACAGGAAGC
TCATATTCCCTATGACCCGGAAAAGATTATAGCTGCCAATGAGCTTGTTGTCGCTGAGCT
TGAAGCACTTTGCAAAATCAAGCATATGTATAAGGAGAAGAAGCTCAAAAATGTTAAGCT
GAAATCATCTCGTTCTGATCTTCTAAAAGCAGAGGGTGAGGTCGATGAGAAGATATCAGA
GGTGTTGAAGCAGAATGTGAAAGCTAAAGACTCTGAGATTTTCCATTTGCGACAAAAGCA
CCAAGATTTAGATTTGGGGAATGCAATTCTGCTTGAAAAGATAAGGCAAGAATGTCTTCA
AAGAAAGAGTGTGAGAGTTTGGAACGTTAATGTGTTTGAGGATAGCTTCAAGGCAGCCTC
AAAATCCATCCATGATTTTGCAAAGCCGGTGATTAGCTTGATGAAAGCTTCAGGTTGGAA
TTTGGACCTGGCAGCAAATTCGATTGAAGATGCTGTTGTGTACAGCAAAAGATGCCACAA
AAAGTATGCATTTGAAGCCTATATTGCACGAAGGATGTTTAATAAGATGTCTCTGCAGTC
ATATGATGTGGATGATATTATGAGATTTGATGAGCCATTTGATTCCCTGATAATTCATCC
GGATTCAAATTTTGCCAAATTTTGCAGAGAAAAGTATCTTTTAGTTGTTCACCCACAGAT
GGAAGCTTCATTCTTTGGGAATTTGGACCAGAGGACTTTTGTATTGAGTGGCAAGCATCC
GAGGACACCATTCTACCAAATATTTGCAAAGATGGCAAAATGGGTTTGGATTTTACTCGG
GATTGCATCCTCAATTGATCCCAAAGCAAGGTTATTTGTTGCCAATCGCGGATGCCAATT
CTCGGACGTATACATGCAATCTGTCGAGGAACCCTATGAAGGTGCTTCTGGGTTTGGTGA
AGCGCAAACCAATTACAAAGTTGAATTCATGGTAATGCCTGGGTTTAAAATTGGAGAAAT
ATTGGTAAAATCTCAGGTTTATCTTTCAAGAATGAAGTAGTCGAGTGATAATTCATGCCT
GACAAAGGTATTGTCATCTGCAGGTAAATTGATAAAAGCTAATCACTTTTTCAGTTTATT
TCTTAACTGGAAGTTAGTTGAGAACTGTTTTGAACATTAGTTGTAGAAAAAGGTGGGATT
GCACCCAAAGCTAAGAATTGGTAGTCTTTCGAGTTCCTTTTTCTTGATATATCTACATTG
TAAGTTGAAAACTCTTGTTATATGCCTCTTGAACTGTAAATATAAATCTAG