Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t04886.2
CDS Infomation

gene=orange1.1t04886
Sequence

ATGGGCCAAAGAAATATGCCATGCACTAGTCAGATGATTGATTTAGAAATGGATCAGCAA
AACCGAGGATATTTGCTCCCTGAGCCCTGTGTCGTTTTGGGTGGTGTAACAAGCTTCCCA
CAGCCTATGCAAACAATAGTAAGAGCTTCGGGGAACACATCCAGTCTTGATGCTCATCAG
CACTATGATAGTGCCATGTTCTATGGGATGCCACAGTACCATGGTGTTCATCATCATCAT
GCTGCAAGTGTTGATCTAGGTGCTTCAACTGCTTCCAACTTATATGTTCCTTACATGCCG
ACCCTATCGTCGGGCATGCCTGTTAATCATGGGTCCACAGATCAGTTGCCATCTTCAAGA
AATTTTGGAGTCATTGGAGCTTCCGCAGAAGAGTATGGAAGGAACAGCCATTTTATGGAT
AATGTAAGAGGGTCATACAAGAGAAAGAATACTGAAGGCTTTCCTGGGAGTTTCCAGAAT
CTTAATGCCCCAGCAAGCTCTAGTTCTTCAGTTGCTCCTTTGCATCCTAGACATCCTGAT
GGTGTAACTCCAATGGATGCTGCATGTTTCTCCCTGCCTCAGTACAGAGGAAATGGCACT
CCATCAATCAGGGAAGTAGAATCTCAGAGAAGTGTGAGGAACAGATTGGTTGCAACTGGT
GGGATGGACCCTGTTCTGGCTCATAGCCATAACCATTTTATTCAGGGAAACTTTATTGGT
CAGCCCTTTCAACCTGCTGGCTGGTTGGAACAGCCAAGTGATGGTGGTGGTTCATCCTGG
ACTCAGGCCCCTGCGATACCTTATATGCACGGGAGCAATGTTAGTGGTGCTCCTATGGAT
TCTGGGAACATGGTTGTGCAACGGTATCCCGAGACTGCCGGCAACAGAAACTCCTCTACT
TTCCTGCAACCTCCTGTCAACATCCAGCATCTCAGTTTCCCTCACCCACCACCTCCTTTT
CAAGGAATTAGAAATCACAATACGAATGTTCACCCTCAAGTAGCAGCGGCTTCATTCAGA
GTTCCATCAAGTTACAGGACTATGAATATTTCACAAGATGGTTCGGAGATGGTGCCAAGA
CATATGGGACCTGTTCCACCAACTGGCTTTAGGATATATCGATCTCCACGGGAGGGACCA
GTGCCCGAGGCTTTAAGACAGCGGAGCCTTCCTCACCTGAGAGTTTTGCCATCAGATGGA
GTTGCTTTACTAGAGATTCCAGACTTTTATGAAGTAGGGAATTTTATCGACCGACACAGA
GATATGCGCTTGGATATAGAAGACATGTCTTACGAGGTAAGTGTACCACTCATTTGTTAA

Peptide Sequence

PEP ID

orange1.1t04886.2
PEP Infomation
Sequence

MGQRNMPCTSQMIDLEMDQQNRGYLLPEPCVVLGGVTSFPQPMQTIVRASGNTSSLDAHQ
HYDSAMFYGMPQYHGVHHHHAASVDLGASTASNLYVPYMPTLSSGMPVNHGSTDQLPSSR
NFGVIGASAEEYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLNAPASSSSSVAPLHPRHPD
GVTPMDAACFSLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAHSHNHFIQGNFIG
QPFQPAGWLEQPSDGGGSSWTQAPAIPYMHGSNVSGAPMDSGNMVVQRYPETAGNRNSST
FLQPPVNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPR
HMGPVPPTGFRIYRSPREGPVPEALRQRSLPHLRVLPSDGVALLEIPDFYEVGNFIDRHR
DMRLDIEDMSYEVSVPLIC*

Transcript Sequence

Transcript ID

orange1.1t04886.2
Transcript Infomation

gene=orange1.1t04886 CDS=21-1340
Sequence

GGATACAGGGATTTAGTAGTATGGGCCAAAGAAATATGCCATGCACTAGTCAGATGATTG
ATTTAGAAATGGATCAGCAAAACCGAGGATATTTGCTCCCTGAGCCCTGTGTCGTTTTGG
GTGGTGTAACAAGCTTCCCACAGCCTATGCAAACAATAGTAAGAGCTTCGGGGAACACAT
CCAGTCTTGATGCTCATCAGCACTATGATAGTGCCATGTTCTATGGGATGCCACAGTACC
ATGGTGTTCATCATCATCATGCTGCAAGTGTTGATCTAGGTGCTTCAACTGCTTCCAACT
TATATGTTCCTTACATGCCGACCCTATCGTCGGGCATGCCTGTTAATCATGGGTCCACAG
ATCAGTTGCCATCTTCAAGAAATTTTGGAGTCATTGGAGCTTCCGCAGAAGAGTATGGAA
GGAACAGCCATTTTATGGATAATGTAAGAGGGTCATACAAGAGAAAGAATACTGAAGGCT
TTCCTGGGAGTTTCCAGAATCTTAATGCCCCAGCAAGCTCTAGTTCTTCAGTTGCTCCTT
TGCATCCTAGACATCCTGATGGTGTAACTCCAATGGATGCTGCATGTTTCTCCCTGCCTC
AGTACAGAGGAAATGGCACTCCATCAATCAGGGAAGTAGAATCTCAGAGAAGTGTGAGGA
ACAGATTGGTTGCAACTGGTGGGATGGACCCTGTTCTGGCTCATAGCCATAACCATTTTA
TTCAGGGAAACTTTATTGGTCAGCCCTTTCAACCTGCTGGCTGGTTGGAACAGCCAAGTG
ATGGTGGTGGTTCATCCTGGACTCAGGCCCCTGCGATACCTTATATGCACGGGAGCAATG
TTAGTGGTGCTCCTATGGATTCTGGGAACATGGTTGTGCAACGGTATCCCGAGACTGCCG
GCAACAGAAACTCCTCTACTTTCCTGCAACCTCCTGTCAACATCCAGCATCTCAGTTTCC
CTCACCCACCACCTCCTTTTCAAGGAATTAGAAATCACAATACGAATGTTCACCCTCAAG
TAGCAGCGGCTTCATTCAGAGTTCCATCAAGTTACAGGACTATGAATATTTCACAAGATG
GTTCGGAGATGGTGCCAAGACATATGGGACCTGTTCCACCAACTGGCTTTAGGATATATC
GATCTCCACGGGAGGGACCAGTGCCCGAGGCTTTAAGACAGCGGAGCCTTCCTCACCTGA
GAGTTTTGCCATCAGATGGAGTTGCTTTACTAGAGATTCCAGACTTTTATGAAGTAGGGA
ATTTTATCGACCGACACAGAGATATGCGCTTGGATATAGAAGACATGTCTTACGAGGTAA
GTGTACCACTCATTTGTTAAATATTTTTTCTTATAATGCCTGATTGCCCAATAAATGAAT
TTAGTAGAAGTGGTTTGTGG