Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t04611.2
CDS Infomation

gene=orange1.1t04611
Sequence

ATGCAAAATCAAGAGAAGTGTGGAGCGTCATGTGAATTTGATGACTGGTCAAATTTCGAA
GACGAGGATATTATGCAGCAGCAATCCGATATTAAAGCCGAGGAGGCTCAAAAGGTTCCA
TTCGTTGCTGATAAGGAACCACTGTCTGCATTAGCATCTGAATATCAGTCCGGCAGCCCA
ATTTTGTTGGAGAAAATTAAGGTTCTTGGTGAGCAGTATGCTGCCATTAGGCGTACACGA
GGAGATGGGAACTGTTTTTTCCGAAGTTTTATGTTCTCTTATCTTGAGCACATTTTGGCT
TCTCAAGATCAAGCAGAAGTAGATCGTATTAAAGCCAAGGTAGAAGAATGTAGAAGAACA
CTTCAGAGCTTGGGTCACGCTGACTTTACCTTTGAAGACTTTTTTGCGTTATTTCTTGAG
CAGCTGGACAACGTTCTTCAAGGAAACGAATTTTCCATAAGTCACGGTGAACTTGTAGTT
AGAAGTAGAGATCAGTCAGTATCTGACTATGTTGTAATGTTTTTCAGATTTGTTACATCT
GGTGAAATAAGAAAGCGCTCAGAGTTTTTTGAACCCTTTATATTGGGACTAACAAATGCA
ACTGTGGAACAGGTTTGTATGGTGGTAAAATGTTTTGTGAACTTATGA

Peptide Sequence

PEP ID

orange1.1t04611.2
PEP Infomation
Sequence

MQNQEKCGASCEFDDWSNFEDEDIMQQQSDIKAEEAQKVPFVADKEPLSALASEYQSGSP
ILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRT
LQSLGHADFTFEDFFALFLEQLDNVLQGNEFSISHGELVVRSRDQSVSDYVVMFFRFVTS
GEIRKRSEFFEPFILGLTNATVEQVCMVVKCFVNL*

Transcript Sequence

Transcript ID

orange1.1t04611.2
Transcript Infomation

gene=orange1.1t04611 CDS=125-772
Sequence

TTAAAATAAAGAAAAAAAAATCTCAAAAGGCAAAAAACGAGAGGATCCGTTTATAGATCA
CATAAAACACAATACTGCCGTTCAGTTGAAATTTGAGAGACATCAGAATTCAGAAAGGAA
GAAGATGCAAAATCAAGAGAAGTGTGGAGCGTCATGTGAATTTGATGACTGGTCAAATTT
CGAAGACGAGGATATTATGCAGCAGCAATCCGATATTAAAGCCGAGGAGGCTCAAAAGGT
TCCATTCGTTGCTGATAAGGAACCACTGTCTGCATTAGCATCTGAATATCAGTCCGGCAG
CCCAATTTTGTTGGAGAAAATTAAGGTTCTTGGTGAGCAGTATGCTGCCATTAGGCGTAC
ACGAGGAGATGGGAACTGTTTTTTCCGAAGTTTTATGTTCTCTTATCTTGAGCACATTTT
GGCTTCTCAAGATCAAGCAGAAGTAGATCGTATTAAAGCCAAGGTAGAAGAATGTAGAAG
AACACTTCAGAGCTTGGGTCACGCTGACTTTACCTTTGAAGACTTTTTTGCGTTATTTCT
TGAGCAGCTGGACAACGTTCTTCAAGGAAACGAATTTTCCATAAGTCACGGTGAACTTGT
AGTTAGAAGTAGAGATCAGTCAGTATCTGACTATGTTGTAATGTTTTTCAGATTTGTTAC
ATCTGGTGAAATAAGAAAGCGCTCAGAGTTTTTTGAACCCTTTATATTGGGACTAACAAA
TGCAACTGTGGAACAGGTTTGTATGGTGGTAAAATGTTTTGTGAACTTATGATTATTTTT
TGCTGTTCCACTCTTCATTATGTTCTTGTATCAAGGAGTAATTGGGAACTAACTAGGTTT
TCTTATTGAGTAAAATTCAAAGTGGATGCAAGAGAAAATAACGGCCATAAATTCAGCAAC
TGTCTCTATAATCAAATCCTTTTTTCCTGTTCACTTTTGTGTGCTATTTCTAGCGACGTT
GTATATCTTTTTTTATTCATCATTATTAAAGACTGACAATTTATCCTGAATCATTAGTTA
ATGGGGATTCAGATCTTTGAACTGTGGGAACCCTGATTTGAAATTTTA