Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t04378.2
CDS Infomation

gene=orange1.1t04378
Sequence

ATGGCACCGCGAATCGCGATTCTCGGAGCTGGAATCTTCGTCAAAACGCAGTACATTCCA
AGACTCGCAGAGATATCTGATCTCGTTTCCCTTAAATTCATTTGGAGTCGTTCTGAGGAA
TCGGCGAAAAGTGCGGCGGAGGTTGCACGTAAGCATTTTGCCGACGTGGAGTGTGTTTGG
GGAGATAACGGACTTGAACAGATTATTAAAGAGGATTCAATCCTTGGTGTCGCCGTTGTG
CTTGCTGGACAAGCTCAGGTTGATACATCACTAAAGCTTCTAAAGGCTGGCAAGCATGTC
ATTCAAGAAAAGCCTGCTGCAGCTAATATTAGTGAGATAGAAAATGCCTTGTCAAGATAC
AATTCTATTTGTCCGGATCCCCCTGGTCAACCAATTTGGGCTGTGGCAGAAAATTATCGT
TTTGAACCTGCGTTTGTGGAGTGCAAGAAACTAATAGCTGAAATTGGCGACATGATGAGT
GTCCAAGTTATTGTGGAAGGATCAATGAACAGTTCAAATCCTTACTTCTCCAGCTCTTGG
AGGCGAAATTTTACTGGAGGTTTCATTCTAGATATGGGGGTCCATTTCATTGCTGGATTG
AGGATGATCACAGGGTGTGAGGTTGTTTCCGTGTCAGCCATTACCTCTCATATAGATAAA
ACTTTACCTCCCCCTGACAACATATCCTCTAATTTTCAACTGGAGAACGGATGCTCTGGA
GTTTTCGTGATGGTTGTTTCCAGTAGATCACCCAAGATATTCTGGCGAGTTGTTGGCATG
AAGGGAACACTACAAGTTGAGCGTGGAAACCAAGATGGACGCCATGGTTACCTGGTAACA
CAATATGGTGCTGATGGGCAGAGTAAAAGCATGTTCTACCCATTCAGTGGAGTGACTGAA
GAATTAAAAGCTTTTATTCATGACATTTCAGAGGCTAAGAAGGGAATCAACCATGTACCT
GAGCCACGCAGTTCTTTTCTGGAAGGTGCTAGGGACGTTGCTCTTCTAGAGGCAATGCTT
GAATCTGGATCAAAACAAGGAGCCCTAGTTCACGTGAAAAAGTTCTAG

Peptide Sequence

PEP ID

orange1.1t04378.2
PEP Infomation
Sequence

MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW
GDNGLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRY
NSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGDMMSVQVIVEGSMNSSNPYFSSSW
RRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGCSG
VFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYPFSGVTE
ELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKKF*

Transcript Sequence

Transcript ID

orange1.1t04378.2
Transcript Infomation

gene=orange1.1t04378 CDS=214-1281
Sequence

CGAAAAAAAAAAAAAAGGTTCAGTCACTCTTCCCCGAGAGCTTAGGTGTCACCCTCTCTC
AGATTCTCCACACATCTTTCTTTTCTAAAATTCCTTCAGAATAGGAAATTCTGAAAAGCG
AATCCAAAAGATTTCAAATCTCCTAGTTTTGAATTACAGAAATTGCAGGCATTGCATTGA
ATTGTACGAACTGCACAAATACAACTACAAAGAATGGCACCGCGAATCGCGATTCTCGGA
GCTGGAATCTTCGTCAAAACGCAGTACATTCCAAGACTCGCAGAGATATCTGATCTCGTT
TCCCTTAAATTCATTTGGAGTCGTTCTGAGGAATCGGCGAAAAGTGCGGCGGAGGTTGCA
CGTAAGCATTTTGCCGACGTGGAGTGTGTTTGGGGAGATAACGGACTTGAACAGATTATT
AAAGAGGATTCAATCCTTGGTGTCGCCGTTGTGCTTGCTGGACAAGCTCAGGTTGATACA
TCACTAAAGCTTCTAAAGGCTGGCAAGCATGTCATTCAAGAAAAGCCTGCTGCAGCTAAT
ATTAGTGAGATAGAAAATGCCTTGTCAAGATACAATTCTATTTGTCCGGATCCCCCTGGT
CAACCAATTTGGGCTGTGGCAGAAAATTATCGTTTTGAACCTGCGTTTGTGGAGTGCAAG
AAACTAATAGCTGAAATTGGCGACATGATGAGTGTCCAAGTTATTGTGGAAGGATCAATG
AACAGTTCAAATCCTTACTTCTCCAGCTCTTGGAGGCGAAATTTTACTGGAGGTTTCATT
CTAGATATGGGGGTCCATTTCATTGCTGGATTGAGGATGATCACAGGGTGTGAGGTTGTT
TCCGTGTCAGCCATTACCTCTCATATAGATAAAACTTTACCTCCCCCTGACAACATATCC
TCTAATTTTCAACTGGAGAACGGATGCTCTGGAGTTTTCGTGATGGTTGTTTCCAGTAGA
TCACCCAAGATATTCTGGCGAGTTGTTGGCATGAAGGGAACACTACAAGTTGAGCGTGGA
AACCAAGATGGACGCCATGGTTACCTGGTAACACAATATGGTGCTGATGGGCAGAGTAAA
AGCATGTTCTACCCATTCAGTGGAGTGACTGAAGAATTAAAAGCTTTTATTCATGACATT
TCAGAGGCTAAGAAGGGAATCAACCATGTACCTGAGCCACGCAGTTCTTTTCTGGAAGGT
GCTAGGGACGTTGCTCTTCTAGAGGCAATGCTTGAATCTGGATCAAAACAAGGAGCCCTA
GTTCACGTGAAAAAGTTCTAGGTTGGGGTCCTTGAGGATTTATGTCCTAGGCTTGGCTAC
ATCATTGTTTGAGCTCGGAAATATGATTCAGATGCTCGATGCTTTCTAATTGTTCTTAGT
TCAGTTGTTCATTTAGACTATAGCTGTCACGAGAATTAGAACCGTCAGATGCTCACCTAC
TCATAGCAGGTTTATTGGCTCTGAAGCCATCGATTTGCTGTTACTATTATATCAATCAAG
TTTTGCTCAATAAAGATTTATCATC