Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t04182.1
CDS Infomation

gene=orange1.1t04182
Sequence

ATGGTGAACGATGGAAGAGCAATAGTGGATGAAGTGTCCGGTTGGCTAAGAGTCTACAGC
GACGGTTCAGTTGATCGAACATGGACCGGACCACCGGAGGTCAAGTTCTTGTCCGAACCG
GTGCCACCCCACAGTGACTTTATTGACAGTGTCGCCACCCACGACGTAACCATCAACAAA
GAATCCGGCCTCCGTGTCCGAATTTATTCACCGGAGGAGATCAAGAAACTTAATGGTGAT
GATTGCAAGAACAAGAAGAAGCTACCAATCATCCTTCACTTTCATGGGGGTGGTTTTTGC
GTTAGCCAAGCTGATTGGTACATGTACTATCACGTTTACACGAAGCTTGCAAAATCTGTC
CCGGCTATCTGTGTCTCCGTCTATCTCCGGCGGGCCCCGGAGCACCGCCTCCCGGCCGCT
TTCGACGATGGTTTCGAAGCCCTCCTTTGGCTCCGGTCACTATCACTGGCTCAGGCTCAG
GCTCGGGAGAATAATTGGCTGACTGAACATGTGGATTTTCAACGCGTCTTCCTCATTGGA
GACAGCTCCGGAGGGAACGTAGTGCATGAAGTGGCGGCACGTGCAGGTGACGCGGACTTG
AGCCCGTTGCGTGTGGCCGGAGCGATTCCGATTCATCCGGGTTTCCTCCGGCAGGAAAGG
AGCAAGTCGGAGTTGGAAAACCCGCAGTCACCTCTTCTGACTCTGGACATGGTGGACAAG
TTCTTGAGCTTTGCCCTGCCGTTGAACAGCGACAAGGGGCATCCGTACACCTGTCCAATG
GGGCCGGCTGCGTCGCCGATCGACGGTCTGAAGCTGCCTCCGTTTCTGCTGTGCGTGGCG
GGTAATGACTTGATTAAGGACACTGAGATGGAATATTATGAAGCCATGAAAAAGGCTGGA
AAGGATGTGGAGTTGTTGGTGAATCCTGGAATGGGTCACAGTTTTTATCTCGACAAGATT
GCAGTCGATATGGACCCAAACACTGCTGCTCAAACTTGTAGTCTTTTTCAAGGAATAGCG
GAGTTTATGAGGAAGCACTGA

Peptide Sequence

PEP ID

orange1.1t04182.1
PEP Infomation
Sequence

MVNDGRAIVDEVSGWLRVYSDGSVDRTWTGPPEVKFLSEPVPPHSDFIDSVATHDVTINK
ESGLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSV
PAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIG
DSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDK
FLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAG
KDVELLVNPGMGHSFYLDKIAVDMDPNTAAQTCSLFQGIAEFMRKH*

Transcript Sequence

Transcript ID

orange1.1t04182.1
Transcript Infomation

gene=orange1.1t04182 CDS=205-1245
Sequence

CTCTTCTACTTTAAAAAATAAATATATAAATCATACAAGACCTTGAATTTGAGCGTAAAT
TACATGCTTGAATTTCTCCATTCATACGCGTGTGACGTGCCTACCTAAAATTCTATATTT
CTATATAAAGAACTATTAGAATTCTCAAAATTGGCAAAATCATCCAAAAATAATTAAACA
CACCCAACACTCAACTAGGTAGCTATGGTGAACGATGGAAGAGCAATAGTGGATGAAGTG
TCCGGTTGGCTAAGAGTCTACAGCGACGGTTCAGTTGATCGAACATGGACCGGACCACCG
GAGGTCAAGTTCTTGTCCGAACCGGTGCCACCCCACAGTGACTTTATTGACAGTGTCGCC
ACCCACGACGTAACCATCAACAAAGAATCCGGCCTCCGTGTCCGAATTTATTCACCGGAG
GAGATCAAGAAACTTAATGGTGATGATTGCAAGAACAAGAAGAAGCTACCAATCATCCTT
CACTTTCATGGGGGTGGTTTTTGCGTTAGCCAAGCTGATTGGTACATGTACTATCACGTT
TACACGAAGCTTGCAAAATCTGTCCCGGCTATCTGTGTCTCCGTCTATCTCCGGCGGGCC
CCGGAGCACCGCCTCCCGGCCGCTTTCGACGATGGTTTCGAAGCCCTCCTTTGGCTCCGG
TCACTATCACTGGCTCAGGCTCAGGCTCGGGAGAATAATTGGCTGACTGAACATGTGGAT
TTTCAACGCGTCTTCCTCATTGGAGACAGCTCCGGAGGGAACGTAGTGCATGAAGTGGCG
GCACGTGCAGGTGACGCGGACTTGAGCCCGTTGCGTGTGGCCGGAGCGATTCCGATTCAT
CCGGGTTTCCTCCGGCAGGAAAGGAGCAAGTCGGAGTTGGAAAACCCGCAGTCACCTCTT
CTGACTCTGGACATGGTGGACAAGTTCTTGAGCTTTGCCCTGCCGTTGAACAGCGACAAG
GGGCATCCGTACACCTGTCCAATGGGGCCGGCTGCGTCGCCGATCGACGGTCTGAAGCTG
CCTCCGTTTCTGCTGTGCGTGGCGGGTAATGACTTGATTAAGGACACTGAGATGGAATAT
TATGAAGCCATGAAAAAGGCTGGAAAGGATGTGGAGTTGTTGGTGAATCCTGGAATGGGT
CACAGTTTTTATCTCGACAAGATTGCAGTCGATATGGACCCAAACACTGCTGCTCAAACT
TGTAGTCTTTTTCAAGGAATAGCGGAGTTTATGAGGAAGCACTGATCAATTATCAATTTT
TTAATCCATAAATAGTTGATTATCCGATTAATGGTGGGGTTTTTCTTAAGTTACATTTGT
CGTAACTTAACAACCCAATTAAAATATACAAAAATAAGTAACATTGCAAGCGTGTGATTT
TTACATTGTTTTAGTTGTGCTCCAAGTTATTACAATAAATGGAACTTAACAAAACCCTAA
TGGTGGATGGATGTGGTCCTGTATGACTTGGCAATGTTGTTTTAATAGTAGTTTAGTGTA
GTTGTGCTCGCTATTATATTATTTTATAAAATAGGGACATGCTTTGAAGTAACTTTCATG
TGGAATGTGCTGTGTAAAATATGTATAATATGTGTGTACTAGCAGCTTGGAAGTTTTTAA
ATTGTTACTCTAATAACATTTTCGGAATTCGATTTATGACTTGCAAGTGAGACAATTT