Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t04042.1
CDS Infomation

gene=orange1.1t04042
Sequence

ATGATGATGAGCAACAACAAGCCTCTTAAGAAATCAGGAACATTTCAGTTTCAAAGATCT
CAGTCAATGGAACTCCAAAACCTTCCTCCTCCCCAATTATTAGCACCAAAACCACAAAGA
TCAGCAACGTTTGGGCCAAGGAAATCTCCTCGTAGAGAATTTCCAACTTCTCCTCGACTC
ATTTTGGGAGAAGAAATAACTCATTTTGGTCACCCTCAACACCCTCTAGCTGAAATTGAC
TTGCCTGATCTCTTTACATGTGCAGGCTGCAAAGAGTACGGCGCAGGCAAGAGATTCACT
TGTCAGCAATGTGATTTTCAGTTGCATGAGTTTTGTGCTTTTGCTCCTCAAACTCTTAAG
AACCATCCCTTACACTGCCAGCACCAGCTCGTTTTCTTTTCCAAACCAGTCAAAGGAGGA
ATAATGAAATCAAGGTGTGATGTGTGTGGCAAGCCCACAAAAGGGTACACATTTAGATGC
AGTGCATGTAGCTTTCAGATGCATCCTTGTTGTGCAAAGCTCTCGACTGAAATCAACTAT
CCTGTCCATGCACATACCTTAAAGCTCCTAGCCGTGACTCCGCTAACAAATGGTGATCCT
GGTTTTGTTTGTGGTGAGTGCAAGAGGAAGAGATCAGGCAGAGTGTATCGATGCACGATT
TGTAATTATCATCTTCATGCAGTCTGTGCAAAGGGTATGGTGAATGGGTTGCAAGCTAAT
GACATCAAGGGCCCAGATAAGCCAAGCATGCTTGGGACTGCCGCACGGCTTGCTTCTCAG
GTTGTCATTGACTTCATCGGGGGCTTGATTGAGGGACTTGGAGAAGGTGTTGGAGAAGCT
GTTGCTTCAAATGTCACTAGAGGAAGGAGCACTACCAGTAGTACTGCTGGCAAGAGGGTA
TATAACTAA

Peptide Sequence

PEP ID

orange1.1t04042.1
PEP Infomation
Sequence

MMMSNNKPLKKSGTFQFQRSQSMELQNLPPPQLLAPKPQRSATFGPRKSPRREFPTSPRL
ILGEEITHFGHPQHPLAEIDLPDLFTCAGCKEYGAGKRFTCQQCDFQLHEFCAFAPQTLK
NHPLHCQHQLVFFSKPVKGGIMKSRCDVCGKPTKGYTFRCSACSFQMHPCCAKLSTEINY
PVHAHTLKLLAVTPLTNGDPGFVCGECKRKRSGRVYRCTICNYHLHAVCAKGMVNGLQAN
DIKGPDKPSMLGTAARLASQVVIDFIGGLIEGLGEGVGEAVASNVTRGRSTTSSTAGKRV
YN*

Transcript Sequence

Transcript ID

orange1.1t04042.1
Transcript Infomation

gene=orange1.1t04042 CDS=36-944
Sequence

GAGTTATTGGCAAGTTGCAAAGCTTAGCCAGGAACATGATGATGAGCAACAACAAGCCTC
TTAAGAAATCAGGAACATTTCAGTTTCAAAGATCTCAGTCAATGGAACTCCAAAACCTTC
CTCCTCCCCAATTATTAGCACCAAAACCACAAAGATCAGCAACGTTTGGGCCAAGGAAAT
CTCCTCGTAGAGAATTTCCAACTTCTCCTCGACTCATTTTGGGAGAAGAAATAACTCATT
TTGGTCACCCTCAACACCCTCTAGCTGAAATTGACTTGCCTGATCTCTTTACATGTGCAG
GCTGCAAAGAGTACGGCGCAGGCAAGAGATTCACTTGTCAGCAATGTGATTTTCAGTTGC
ATGAGTTTTGTGCTTTTGCTCCTCAAACTCTTAAGAACCATCCCTTACACTGCCAGCACC
AGCTCGTTTTCTTTTCCAAACCAGTCAAAGGAGGAATAATGAAATCAAGGTGTGATGTGT
GTGGCAAGCCCACAAAAGGGTACACATTTAGATGCAGTGCATGTAGCTTTCAGATGCATC
CTTGTTGTGCAAAGCTCTCGACTGAAATCAACTATCCTGTCCATGCACATACCTTAAAGC
TCCTAGCCGTGACTCCGCTAACAAATGGTGATCCTGGTTTTGTTTGTGGTGAGTGCAAGA
GGAAGAGATCAGGCAGAGTGTATCGATGCACGATTTGTAATTATCATCTTCATGCAGTCT
GTGCAAAGGGTATGGTGAATGGGTTGCAAGCTAATGACATCAAGGGCCCAGATAAGCCAA
GCATGCTTGGGACTGCCGCACGGCTTGCTTCTCAGGTTGTCATTGACTTCATCGGGGGCT
TGATTGAGGGACTTGGAGAAGGTGTTGGAGAAGCTGTTGCTTCAAATGTCACTAGAGGAA
GGAGCACTACCAGTAGTACTGCTGGCAAGAGGGTATATAACTAAGCAAGGTTGAAGCTGA
TATTTTATTTTATCACGATATTAATTTATGATCACTGAGCTTGGATCCTCATTATTTATT
TTTATTATGGCATATGGGCTGTTTTATATCTGCTATGTTGAAGCTGGGAAAGTGGTTAAT
GTGAAATTGTATATGTTATGTATCCAAGTTGTTTCATTACGTATTGTGTGATTCCTTATT
GTGTATCAGAATATATATATATATTTTTCTCTGAATAGATGAATTTT