Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03898.2
CDS Infomation

gene=orange1.1t03898
Sequence

ATGGCGGACCCGAATGGTCATAGCTGGAGAGATGGCATGTCATCTGATAACATCAAGGGT
TTGATTTTGGCACTTTCGTCCAGTATCTTTATTGGTTCTAGTTTCATTGTTAAGAAGAAG
GGGTTGAAGAAAGCTGGCGCTTCTGGTGTTAGGGCAGGATTTGGAGGCTATTCTTACTTG
TATGAGCCACTTTGGTGGGTGGGCATGATAACAATGGTCGTTGGGGAAATTGCAAACTTT
GCAGCCTATGCCTTTGCACCGGCAATACTGGTCACACCTCTTGGTGCCCTCAGCATCATT
ATCAGTGCTGCTCTTGCTCATATCATTTTACGAGAGAGACTACACATTTTTGGAATACTA
GGCTGTATTCTTTGTGTTGTGGGCTCTACAACAATTGTGTTGCATGCTCCTGCAGAACGT
GAGATAGAGTCTGTGATAGAAGTTTGGAATCTTGCTACAGAGCCAGCTTTTCTCTTATAT
GCAGCTCTGGTCATAACAGCTGTATTTATCCTTATATTCCACTATATCCCGCAATATGGC
CAGACACACATAATGGTGTATATAGGAGTTTGTTCCCTTGTAGGTTCTTTGTCGGTTATG
AGTGTTAAGGCAATTGGAATTGCTCTGAAGTTGACATTGTCAGGAATGAATCAGCTAATA
TATCCCCAAACATGGGCCTTCACATTAATTGTAATTGTTTGTGTGCTTACCCAAATGAAT
TATCTGAACATGGCGCTTGATACTTTTAACACGGCAGTTGTCTCTCCCATATACTATGTG
ATGTTCACATCACTTACCATTCTAGCTAGCGTGATCATGTTTAAGGACTGGGATAGGCAG
AATCCAACCCAGATTGTCACGGAAATGTGTGGATTTGTTACAATCCTTGCAGGAACTTTT
CTTCTTCACAAAACCAAGGACCTGGGTGATGGTTCAAGTTTGACACCGTCTATGTCACTA
CGATTATCGAAGCATGCGGATGATGACGACTTGGAATCCGAGGGCATCCCTCTTAGGCGG
CAGGAGTCACTGAGAACACCGTGA

Peptide Sequence

PEP ID

orange1.1t03898.2
PEP Infomation
Sequence

MADPNGHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYL
YEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGIL
GCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYG
QTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMN
YLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTF
LLHKTKDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLRTP*

Transcript Sequence

Transcript ID

orange1.1t03898.2
Transcript Infomation

gene=orange1.1t03898 CDS=462-1505
Sequence

GTGGAATTTGCCAACAAAGAAAATCAGAATGAAAGATAAAAGCATCTCTCTTTCATCAAC
GCAAGTCATACGAGAGTCTTTCTTCTTATTCTCTTTCTCTTCACATCCAAGAAATGTCGC
CAGCACGATACCAGCTGTTCCTACCAAACTCTCCCTCTCTCTATCTTTAAACGCGGTCGC
AAATCTTGTTGCTTCATTTACAAGATCTGCCGTCTGGGTATCTCCACTTAACTCGAGATC
TATCGCCGCCCATTTCTTGTTTTAGCTCAAGATTTGAGTACCCATTTGAGGAAATCGAGC
ATAATCGCAATATTCATGTGCTAAAACGGTGAATCAAGTGACTCTTGGTTAGTGGTGAGT
GACTCAGTCCGAGTTGAGACTGAGTTATGCTGTTGAGATAGCACAGTGTTAAGTGGTGGA
AAGATATATATAGATAATTATAAATAATATTAAAAAAGTCAATGGCGGACCCGAATGGTC
ATAGCTGGAGAGATGGCATGTCATCTGATAACATCAAGGGTTTGATTTTGGCACTTTCGT
CCAGTATCTTTATTGGTTCTAGTTTCATTGTTAAGAAGAAGGGGTTGAAGAAAGCTGGCG
CTTCTGGTGTTAGGGCAGGATTTGGAGGCTATTCTTACTTGTATGAGCCACTTTGGTGGG
TGGGCATGATAACAATGGTCGTTGGGGAAATTGCAAACTTTGCAGCCTATGCCTTTGCAC
CGGCAATACTGGTCACACCTCTTGGTGCCCTCAGCATCATTATCAGTGCTGCTCTTGCTC
ATATCATTTTACGAGAGAGACTACACATTTTTGGAATACTAGGCTGTATTCTTTGTGTTG
TGGGCTCTACAACAATTGTGTTGCATGCTCCTGCAGAACGTGAGATAGAGTCTGTGATAG
AAGTTTGGAATCTTGCTACAGAGCCAGCTTTTCTCTTATATGCAGCTCTGGTCATAACAG
CTGTATTTATCCTTATATTCCACTATATCCCGCAATATGGCCAGACACACATAATGGTGT
ATATAGGAGTTTGTTCCCTTGTAGGTTCTTTGTCGGTTATGAGTGTTAAGGCAATTGGAA
TTGCTCTGAAGTTGACATTGTCAGGAATGAATCAGCTAATATATCCCCAAACATGGGCCT
TCACATTAATTGTAATTGTTTGTGTGCTTACCCAAATGAATTATCTGAACATGGCGCTTG
ATACTTTTAACACGGCAGTTGTCTCTCCCATATACTATGTGATGTTCACATCACTTACCA
TTCTAGCTAGCGTGATCATGTTTAAGGACTGGGATAGGCAGAATCCAACCCAGATTGTCA
CGGAAATGTGTGGATTTGTTACAATCCTTGCAGGAACTTTTCTTCTTCACAAAACCAAGG
ACCTGGGTGATGGTTCAAGTTTGACACCGTCTATGTCACTACGATTATCGAAGCATGCGG
ATGATGACGACTTGGAATCCGAGGGCATCCCTCTTAGGCGGCAGGAGTCACTGAGAACAC
CGTGATATTCATATATTCTTTGCTTTCATCTCTGCCATTCATACAAACATCAAACTCTGG
GGAGGAACTGACATCAACTTGTATTTGGATCCAATCATTTTAATGGTGATCCTTTTTACC
AGAAATGGTAGAGAGGATGATATTTTTGTTTTGCTTGTCCCCTGTTTCGGCTTCACGAAG
AGATTCCTAGATTTCAGCAACTGCATATTTTATACCGTTTCTCCCTGGTGCATACAGAAG
GGATTGCCAAATGTAATTTTGAGCCTGTTGGTTGTATACTGTATTCTTCCTACAGATGTT
GTATCACTTGCTTCATTTTGCTGAGAATCAGTGGATATTTTCCCAAAGTTGTGAACTGAA
TTTTCAGAAATACTAATGAAAGCAAATCTTTAACAAATACGACATTTAACTCTTAAAACT
TATATGCTCAAATCTTTCAGGTTATGAATAATTTCAGGTACAAACAAAAGCTATCTAAAT
TTGTCCTTTTGGCTACAGAAGAACCATGGTGTTTCCAATATCACAAACACGAAAAGCAAA
ACTCAACTCTTTTCTCGCACTTCTTTTTTGTATTAGAGTATTACTAAAATCTCATCAATA
ATGCTGCTTCTTTTCCATCGATGGCTGAATTTCTATAATTCTATGGCATCAGCTTATGGT
TGCCTGTATTAACTACAACAAAGTGAATGGTACATCAATCGTTTCTGCTGATGTTTTCTT
CCACCAGACAATACAGAAGAGAAAGACCAAATCATCATTGGAATTCCAGAACATCATCTC
CCATCACTTTCCTATTTGCTTTAGAAGGCCAGAGACTGAAGCACAATGAGTTGAGTTGTT
ATTGCATTTCTCACAGCATGACTGCAGCAATTCAATGGCCTTTCGGCACCTACACCAATT
CAGAACTTAAATTAACAATGAATATAAACAGAAGTAAAAATTTTTTTTTTTTTTGAGGGG
GGG