Gene sequences

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Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	orange1.1t03838.1
CDS Infomation	gene=orange1.1t03838
Sequence	ATGGGTTGTGTGTATTCGAGAGCATGCATAGGCGAGATTTGCACGCCGAGAGATGCAAGA ATTAGAATCAAAGAGCCTCAGCAAACCACATCAAGAACGACAAACGAGATTGCCGTTTTC TCTCCGGCATCATCGTCGTCAGACGGTCCAGACGCCGAGACAAGGGACCAAATCAGCCAA CTGAACCCGGAGCTCGGTATCACCAGACTCTCTAGGGTTTCGTCCCAGTTTCTTCCTCCA GAAGGTTCGAGGACCGTTAAAGTTCCGTCGGCTAAGTACGAGTTGAGATATTCGTTCCTG TCGCAAAGAGGTTACTATCCAGATGCGCTCGATAAGGCCAATCAGGACAGTTTCTGTATT CACACGCCGTTTGGAACCAGTCAAGATGATCACTTTTTTGGAGTCTTTGATGGACACGGG GAGTTCGGAGCTCAGTGTTCACAGTTCGTTAAGAGGAAATTGTGTGAGAATTTGCTTCGG AATAATAAGTTCCACGAGGACGCCGTTGACGCTTGCCACTCTTCGTATTTAACCACGAAT TCGCAGTTGCACGCAGATGTTTTGGATGATAGCATGAGCGGGACCACTGCTGTTACCGTT TTAGTCCGCGGGAGGACGATTTATGTGGCGAATTCCGGTGATTCGAGGGCTGTTTTGGCC GAGAGAAGAGGGAAGGAAATCGTGGCCGTTGATTTGTCTATAGATCAGACACCTTTTAGA GAGGATGAGCTGGAAAGAGTGAAGCTTTCTGGAGCTAGAGTGCTGACTCTGGACCAAATT GAGGGGTTAAAGAATCCTGATGTGCAGTGCTGGGGTACTGAAGAGGGTGATGATGGTGAT CCTCCTAGATTGTGGGTCCCAAATGGAATGTATCCCGGGACTGCATTTACGAGGAGCATT GGTGACTCAATCGCAGAGACAATTGGCGTTGTTGCCAATCCTGAGATTGTTGTTTGGGAG CTAACCAATGATCATCCTTTCTTTGTGCTAGCTAGTGATGGAGTTTTTGAGTTTCTTTCA AGCCAAGCTGTCGTTGACATGGTTGCAAAATATAAAGATCCCCGTGATGCTTGTGCTGCA ATTGTGGCTGAATCTTATCGACTTTGGTTACAGTATGAAACTCGTACAGATGATATCACA GTGATAGTTGTGCATATTAATGGCTTAAAAAATACTGCCGTTAATCAATCAATACCTCCT GGTGTTTTTTTACGAACCCCTGTTCCTCAAGTTATAGAGGTTACAGGATCAGAGTCTCCT TCAACCTTTGGATGGAGCTCTAGGAATCAACGTATAAGGCATGATTTATCACGTGCACGT CTTCGAGCCATTGAAAACTCACTGGAGAATGGGCAAATTTGGGTTCCTTCATCTTCAGCC CACAGGAAAACTTGGGAGGAAGAAGCACACATTGAACGGGCACTTCATGACCATTTCCTC TTCAGAAAACTGACTGATTCACAGTGTCATGTCTTATTGGATTGCATGCAAAGGGTTGAG GTTCAAGCAGGGGATATTGTAGTTAAACAGGGTGGAGAAGGTGACTGCTTTTATGTTGTT GGCAGTGGAGAATTTGAGGTTATGGCAACCCAGGAAGAAAAGAATGGAGAGGTACCTCGA GTTTTGCAGCGGTATACAGCTGAGAAATTATCGTCTTTCGGGGAGCTGGCTCTTATGTAT AATAAACCACTCCAGGCTTCTGTGCGTGCTGTGACTAATGGGATGCTTTGGGCGCTAAAA AGAGAAGATTTTCGTGGAATTTTGATGTCTGAGTTTTCTAATTTGTCATCTTTGAAGTTG CTTCGATCAGTGGATCTGCTCTCTAGGTTGACAATCTTACAGCTGAGTCACCTCGCAGAT ACTCTTTCTGAAGTTTCCTTCTCAGCGGGGCAGACAATAGTTAATATGAATGAAGGCGTT GCTGCATTGTATATTATTCAGAGGGGACAAGTGAGAATTACTTTTGATGCAGACTTATTA AGTAATGCAAATGTGTGCAGTCTGAAATCAGATCTTCATGTAGAGGATGATGGTACACAG AGTAGTAAAGAGCTCTCTGTAGAGAAGAGCGAAGGTAGCTATTTTGGTGAATGGACATTA CTTGGTGAACATATGGGTTCTTTAACTGCAGTTGCAGTGGATGATGTTGTCTGTGCTATT TTAACAAAGGAGAAGTTTGATTTAGTTGTTGGTCCTTTGACGAAGATCTCACATGATGAT CAAAATTCAAAAGACTATTCTTCTGATATTCCGAAGAAACCTGCCAAAAGTATTGATATC TCATCTCTTGCTAAAGTTAGCCTCACCGATATGGAATGGAGAAAGTGTTTATATTCTACC GACTGCAGTGAGATTGGGCTTGTACTTTTGAGAGACTCAGAGAATTTTCTTAGCTTGAAA AGGTTTTCAAAGCAGAAGGTTAAATGCCTGGGAAAGGAAGTCCAGGTGTTAAAGGAGAAG AATCTGATGAAGAGTGTCAGCCCCTCGGCTTGCGTCCCTCAGATTTTATGCACATGTGCT GACAGTATGCATGCTGGCCTGCTACTGAACACATATCTTGCTTGCCCTCTGGCTTCAATA CTTCATACACCACTCGATGAACAATCGGCACGATTCTGTGCTGCCTCGGTTGTTGCTGCA TTAGAAGATTTACACAAGAGAGGTGTTCTCTACAGAGGTGTGTCTCCTGATGTTCTAATG TTGGACAAAAGTGGACATTTACAGTTAGTAGACTTTCGATTCGGGAAAGGCTTATCTGGC AACAGAACATTCACAATTTGTGGAATGGCAGACTATTTAGCTCCAGAGATAGTTCAGGGA AAAGGCCATGGTCTCGCTGCTGACTGGTGGGCATTGGGAGTCCTAATTTATTTCATGTTA CAAGGTGAAATGCCATTTGGATCTTGGAGAGAGAGTGAAATAGATATTGTTGCAAAGATT GCAAAAGGGCAGCTAAGTCTTCCACAGAATTTAAGCCCTGAAGCTGTTGATCTCCTTACA AAGTTGCTCGTAGTTGATGAAAATACAAGACTTGGTAGCCAAGGTCCCACTTCTGTCAAA ACTCACCCATGGTTCAGAGATGTTGATTGGAAAGGGATTGCTGAATCTACTTCTCCTGTT CCACATGAGATAATGTCTCGCATAAGTCAACACCTGGATAGTCATTTTGAGGATTCTCCT GTTTTTCAAGCTTCTCCGCCTCGAGATGTTGAAGAACTCAATGTTCCTGAATGGCTTGAT GACTGGTAG

Peptide Sequence

PEP ID	orange1.1t03838.1
PEP Infomation
Sequence	MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQ LNPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCI HTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTN SQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFR EDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSI GDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAA IVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIEVTGSESP STFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALHDHFL FRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPR VLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKL LRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL SNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAI LTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLYST DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA DSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM LDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFML QGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVK THPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFEDSPVFQASPPRDVEELNVPEWLD DW*

Transcript Sequence

Transcript ID	orange1.1t03838.1
Transcript Infomation	gene=orange1.1t03838 CDS=1-3249
Sequence	ATGGGTTGTGTGTATTCGAGAGCATGCATAGGCGAGATTTGCACGCCGAGAGATGCAAGA ATTAGAATCAAAGAGCCTCAGCAAACCACATCAAGAACGACAAACGAGATTGCCGTTTTC TCTCCGGCATCATCGTCGTCAGACGGTCCAGACGCCGAGACAAGGGACCAAATCAGCCAA CTGAACCCGGAGCTCGGTATCACCAGACTCTCTAGGGTTTCGTCCCAGTTTCTTCCTCCA GAAGGTTCGAGGACCGTTAAAGTTCCGTCGGCTAAGTACGAGTTGAGATATTCGTTCCTG TCGCAAAGAGGTTACTATCCAGATGCGCTCGATAAGGCCAATCAGGACAGTTTCTGTATT CACACGCCGTTTGGAACCAGTCAAGATGATCACTTTTTTGGAGTCTTTGATGGACACGGG GAGTTCGGAGCTCAGTGTTCACAGTTCGTTAAGAGGAAATTGTGTGAGAATTTGCTTCGG AATAATAAGTTCCACGAGGACGCCGTTGACGCTTGCCACTCTTCGTATTTAACCACGAAT TCGCAGTTGCACGCAGATGTTTTGGATGATAGCATGAGCGGGACCACTGCTGTTACCGTT TTAGTCCGCGGGAGGACGATTTATGTGGCGAATTCCGGTGATTCGAGGGCTGTTTTGGCC GAGAGAAGAGGGAAGGAAATCGTGGCCGTTGATTTGTCTATAGATCAGACACCTTTTAGA GAGGATGAGCTGGAAAGAGTGAAGCTTTCTGGAGCTAGAGTGCTGACTCTGGACCAAATT GAGGGGTTAAAGAATCCTGATGTGCAGTGCTGGGGTACTGAAGAGGGTGATGATGGTGAT CCTCCTAGATTGTGGGTCCCAAATGGAATGTATCCCGGGACTGCATTTACGAGGAGCATT GGTGACTCAATCGCAGAGACAATTGGCGTTGTTGCCAATCCTGAGATTGTTGTTTGGGAG CTAACCAATGATCATCCTTTCTTTGTGCTAGCTAGTGATGGAGTTTTTGAGTTTCTTTCA AGCCAAGCTGTCGTTGACATGGTTGCAAAATATAAAGATCCCCGTGATGCTTGTGCTGCA ATTGTGGCTGAATCTTATCGACTTTGGTTACAGTATGAAACTCGTACAGATGATATCACA GTGATAGTTGTGCATATTAATGGCTTAAAAAATACTGCCGTTAATCAATCAATACCTCCT GGTGTTTTTTTACGAACCCCTGTTCCTCAAGTTATAGAGGTTACAGGATCAGAGTCTCCT TCAACCTTTGGATGGAGCTCTAGGAATCAACGTATAAGGCATGATTTATCACGTGCACGT CTTCGAGCCATTGAAAACTCACTGGAGAATGGGCAAATTTGGGTTCCTTCATCTTCAGCC CACAGGAAAACTTGGGAGGAAGAAGCACACATTGAACGGGCACTTCATGACCATTTCCTC TTCAGAAAACTGACTGATTCACAGTGTCATGTCTTATTGGATTGCATGCAAAGGGTTGAG GTTCAAGCAGGGGATATTGTAGTTAAACAGGGTGGAGAAGGTGACTGCTTTTATGTTGTT GGCAGTGGAGAATTTGAGGTTATGGCAACCCAGGAAGAAAAGAATGGAGAGGTACCTCGA GTTTTGCAGCGGTATACAGCTGAGAAATTATCGTCTTTCGGGGAGCTGGCTCTTATGTAT AATAAACCACTCCAGGCTTCTGTGCGTGCTGTGACTAATGGGATGCTTTGGGCGCTAAAA AGAGAAGATTTTCGTGGAATTTTGATGTCTGAGTTTTCTAATTTGTCATCTTTGAAGTTG CTTCGATCAGTGGATCTGCTCTCTAGGTTGACAATCTTACAGCTGAGTCACCTCGCAGAT ACTCTTTCTGAAGTTTCCTTCTCAGCGGGGCAGACAATAGTTAATATGAATGAAGGCGTT GCTGCATTGTATATTATTCAGAGGGGACAAGTGAGAATTACTTTTGATGCAGACTTATTA AGTAATGCAAATGTGTGCAGTCTGAAATCAGATCTTCATGTAGAGGATGATGGTACACAG AGTAGTAAAGAGCTCTCTGTAGAGAAGAGCGAAGGTAGCTATTTTGGTGAATGGACATTA CTTGGTGAACATATGGGTTCTTTAACTGCAGTTGCAGTGGATGATGTTGTCTGTGCTATT TTAACAAAGGAGAAGTTTGATTTAGTTGTTGGTCCTTTGACGAAGATCTCACATGATGAT CAAAATTCAAAAGACTATTCTTCTGATATTCCGAAGAAACCTGCCAAAAGTATTGATATC TCATCTCTTGCTAAAGTTAGCCTCACCGATATGGAATGGAGAAAGTGTTTATATTCTACC GACTGCAGTGAGATTGGGCTTGTACTTTTGAGAGACTCAGAGAATTTTCTTAGCTTGAAA AGGTTTTCAAAGCAGAAGGTTAAATGCCTGGGAAAGGAAGTCCAGGTGTTAAAGGAGAAG AATCTGATGAAGAGTGTCAGCCCCTCGGCTTGCGTCCCTCAGATTTTATGCACATGTGCT GACAGTATGCATGCTGGCCTGCTACTGAACACATATCTTGCTTGCCCTCTGGCTTCAATA CTTCATACACCACTCGATGAACAATCGGCACGATTCTGTGCTGCCTCGGTTGTTGCTGCA TTAGAAGATTTACACAAGAGAGGTGTTCTCTACAGAGGTGTGTCTCCTGATGTTCTAATG TTGGACAAAAGTGGACATTTACAGTTAGTAGACTTTCGATTCGGGAAAGGCTTATCTGGC AACAGAACATTCACAATTTGTGGAATGGCAGACTATTTAGCTCCAGAGATAGTTCAGGGA AAAGGCCATGGTCTCGCTGCTGACTGGTGGGCATTGGGAGTCCTAATTTATTTCATGTTA CAAGGTGAAATGCCATTTGGATCTTGGAGAGAGAGTGAAATAGATATTGTTGCAAAGATT GCAAAAGGGCAGCTAAGTCTTCCACAGAATTTAAGCCCTGAAGCTGTTGATCTCCTTACA AAGTTGCTCGTAGTTGATGAAAATACAAGACTTGGTAGCCAAGGTCCCACTTCTGTCAAA ACTCACCCATGGTTCAGAGATGTTGATTGGAAAGGGATTGCTGAATCTACTTCTCCTGTT CCACATGAGATAATGTCTCGCATAAGTCAACACCTGGATAGTCATTTTGAGGATTCTCCT GTTTTTCAAGCTTCTCCGCCTCGAGATGTTGAAGAACTCAATGTTCCTGAATGGCTTGAT GACTGGTAG