Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03835.1
CDS Infomation

gene=orange1.1t03835
Sequence

ATGGAGGATGATAATGGGCTTGAGCTGAGCCTCGGCTTATCTTGTGGTGGATCAGCTGGT
AAATCCAAAAGTAAAAATGGTAGCCCTTCAGATACTTTAGCAGAGGAAGTTGACAGGGGA
AACAAAATCGGAGATGATTTTAAAACTTTCCTCCATGGCACCACCCAGAAACAGGACTCA
GGTGCTGGGTCTCAGAGAAGTGATTCAGTGAAATCTCAAGAGAACTTCTTCAATGACCTA
TCCAAGGTCTCTGCTGAAGCTGATGCTTCTACTAACTTGAATAGTAGAGGACGTTGGGTC
TCAAACATCAGCAGGTCTGCCGAGATTGAGGAGGAAAAACAATCTGACGCTGGTAATAAA
CGAAAAATGCTGTTTGATGAGGTAAATAATAAAAAAAGACTTGAGAGGGAAGCACTTCCT
TCTGATTTACATGACAAGACAAAGACGTCTCATATTTCCATAACAACAACGGAAGGCTCG
ACTGCTGAAAATGAAGATGTGGCGGAGTCTGAAGTTGAGGGTTCAACCTCAAGGATGGTT
TCTCACCAAGATGATGGCTCCAAACGATACATTACAGTTGGTGGTTCCTCTGAGGTTCCA
AAGGAGGTTCGGGGGTTTCCTGATTCGAGTGTTGTAGACGCACATGGACAAAAGAGGTTT
AATGGTTCTTCAGAAAATGAATTTAAGGTCGGAAACATAAGTTATGGCGTTCCATTCTCA
GTTCAACCAATGAACATTATGAATATACCTTACACCATATCTGTGCGGGAGGCTAACTCA
GCTGGAGTCCCTGGCACATCAGTAGTTGGCATGACACAGAAGATGCCTACTGCAAGTGGT
GAGCGATCAGGAGCCCAGCCTGTGAACCCTGGAAACACACCAGTTATGTTTGGCTACTCG
CCTGTCCAACTTCCAATGTTTGATAAAGATAATTCATGGGGTTTGGTTCCTCAGTCTCAG
CAGATCCACCCTTCTTATGCTGGTAGAGGTCCACAAAACTCAGATAAGCATAGCGATGGA
ATAAAGATTCCTCAAGCTACCATGCAATCAATTGGACGTAATTCATCCGAAGCTGCACAA
TTTGATGGGAGAACGATAGAATGGGCCAAAGGTGAAGGGAAACAGCATGCTGCAGAAGAA
GGCTCCTCTGCTCGAGCAGAAGATGTAAAAGTAAGTGGCATGAACCATAGGGCAAACGAT
ATATCCGACAGATCAACACCAGAAGGTCTTTCTCTTGATTTATCAGCTATAAAGCCTGGT
ATTGCTGCTGAAATAAAATTTGGGGGATGTGGTTCTTGCCCAAATTTACCATGGGTGTCA
ACCACAGGTTCTGGCCCAAATGGTAGAACAATTTCCGGTGTTACTTATAGGTACAGTTCA
AACCAGATCAGGATTGTTTGTGCTTGCCATGGAAGCCATATGTCCCCAGAGGAGTTTGTT
CGACATGCCAGCGATGAGAATGTTAACCCTGAGAGTGGCACTGTTGTGCTCACATTTCCA
AGTTCGAACCCTGCTGCCTCTGCTCAGAGCTGA

Peptide Sequence

PEP ID

orange1.1t03835.1
PEP Infomation
Sequence

MEDDNGLELSLGLSCGGSAGKSKSKNGSPSDTLAEEVDRGNKIGDDFKTFLHGTTQKQDS
GAGSQRSDSVKSQENFFNDLSKVSAEADASTNLNSRGRWVSNISRSAEIEEEKQSDAGNK
RKMLFDEVNNKKRLEREALPSDLHDKTKTSHISITTTEGSTAENEDVAESEVEGSTSRMV
SHQDDGSKRYITVGGSSEVPKEVRGFPDSSVVDAHGQKRFNGSSENEFKVGNISYGVPFS
VQPMNIMNIPYTISVREANSAGVPGTSVVGMTQKMPTASGERSGAQPVNPGNTPVMFGYS
PVQLPMFDKDNSWGLVPQSQQIHPSYAGRGPQNSDKHSDGIKIPQATMQSIGRNSSEAAQ
FDGRTIEWAKGEGKQHAAEEGSSARAEDVKVSGMNHRANDISDRSTPEGLSLDLSAIKPG
IAAEIKFGGCGSCPNLPWVSTTGSGPNGRTISGVTYRYSSNQIRIVCACHGSHMSPEEFV
RHASDENVNPESGTVVLTFPSSNPAASAQS*

Transcript Sequence

Transcript ID

orange1.1t03835.1
Transcript Infomation

gene=orange1.1t03835 CDS=326-1858
Sequence

GTGCGAGTCAAACGTCAAAAAGAATCTCCATGACAATCACATGCTCAAATTATAAAGTTA
AAAAAAAGAAGAAAGAAAATTAGAAGTGGTGTTTGAACGATTCTTACACTAACCTGTACC
AAACAAATCCACTTGTAATGCCCTTTCTCTCTCTCAGTAACTATTACAGTTCTCTTTGAC
CTAGGGTTTGTTCTTAATCGGCTTGTCACCAATTCAGGCTTGTACTTTTGTGGTGGCAAC
ATACAGGTTCACGATAGTAGAGGGTAGTCTGTAGGATTGAAAAAGGTTATGCTTGACCCT
CATTAATATACATCAGTCCTATAGCATGGAGGATGATAATGGGCTTGAGCTGAGCCTCGG
CTTATCTTGTGGTGGATCAGCTGGTAAATCCAAAAGTAAAAATGGTAGCCCTTCAGATAC
TTTAGCAGAGGAAGTTGACAGGGGAAACAAAATCGGAGATGATTTTAAAACTTTCCTCCA
TGGCACCACCCAGAAACAGGACTCAGGTGCTGGGTCTCAGAGAAGTGATTCAGTGAAATC
TCAAGAGAACTTCTTCAATGACCTATCCAAGGTCTCTGCTGAAGCTGATGCTTCTACTAA
CTTGAATAGTAGAGGACGTTGGGTCTCAAACATCAGCAGGTCTGCCGAGATTGAGGAGGA
AAAACAATCTGACGCTGGTAATAAACGAAAAATGCTGTTTGATGAGGTAAATAATAAAAA
AAGACTTGAGAGGGAAGCACTTCCTTCTGATTTACATGACAAGACAAAGACGTCTCATAT
TTCCATAACAACAACGGAAGGCTCGACTGCTGAAAATGAAGATGTGGCGGAGTCTGAAGT
TGAGGGTTCAACCTCAAGGATGGTTTCTCACCAAGATGATGGCTCCAAACGATACATTAC
AGTTGGTGGTTCCTCTGAGGTTCCAAAGGAGGTTCGGGGGTTTCCTGATTCGAGTGTTGT
AGACGCACATGGACAAAAGAGGTTTAATGGTTCTTCAGAAAATGAATTTAAGGTCGGAAA
CATAAGTTATGGCGTTCCATTCTCAGTTCAACCAATGAACATTATGAATATACCTTACAC
CATATCTGTGCGGGAGGCTAACTCAGCTGGAGTCCCTGGCACATCAGTAGTTGGCATGAC
ACAGAAGATGCCTACTGCAAGTGGTGAGCGATCAGGAGCCCAGCCTGTGAACCCTGGAAA
CACACCAGTTATGTTTGGCTACTCGCCTGTCCAACTTCCAATGTTTGATAAAGATAATTC
ATGGGGTTTGGTTCCTCAGTCTCAGCAGATCCACCCTTCTTATGCTGGTAGAGGTCCACA
AAACTCAGATAAGCATAGCGATGGAATAAAGATTCCTCAAGCTACCATGCAATCAATTGG
ACGTAATTCATCCGAAGCTGCACAATTTGATGGGAGAACGATAGAATGGGCCAAAGGTGA
AGGGAAACAGCATGCTGCAGAAGAAGGCTCCTCTGCTCGAGCAGAAGATGTAAAAGTAAG
TGGCATGAACCATAGGGCAAACGATATATCCGACAGATCAACACCAGAAGGTCTTTCTCT
TGATTTATCAGCTATAAAGCCTGGTATTGCTGCTGAAATAAAATTTGGGGGATGTGGTTC
TTGCCCAAATTTACCATGGGTGTCAACCACAGGTTCTGGCCCAAATGGTAGAACAATTTC
CGGTGTTACTTATAGGTACAGTTCAAACCAGATCAGGATTGTTTGTGCTTGCCATGGAAG
CCATATGTCCCCAGAGGAGTTTGTTCGACATGCCAGCGATGAGAATGTTAACCCTGAGAG
TGGCACTGTTGTGCTCACATTTCCAAGTTCGAACCCTGCTGCCTCTGCTCAGAGCTGAAA
TGCTCCATCCTTTTTTTTTTTTTTTTCCAGACTAAAATTGATTAATTGACATGTGGTCGA
GGAATACTTGTGTATAACTTTGTACAACCAGCGAGATTCCTCAACTTTCTTGTTATACTC
TTCTTTTATCTGTTTGTCTCAACTACAAAAGCCGATTCTGCTAATGTATGTAATAATGTG
TTGCATAATTTTGTTGTCCAATAGTAATGATCTGCAGTAAGAATAATCTTAAACAAAATA
GTGGCATTTGGGATGTACTCGATTGATTTGAAAAATCAATTGACTTCAGGGGTGGCAAAG
AAGCAGGTTATATAGATTTGAAGAAGCCGTAAAGATGCATCAATAGAGATGAAGATGGAT
AAACTTCA