Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03831.1
CDS Infomation

gene=orange1.1t03831
Sequence

ATGGATATCATTGCAAAATTTCACGGGTCATGCCGTGCTGAAATCAGGAGATTGCTGGTG
ATTACTGGCATGGTAGTGGCTGTTATGGTTGTTTTTCAGAGTTTCTCACTAGTGACTAAT
AAGGGTTCCATTGTGATGATGGTGGTTGGCAATAGCAATACATCTGTTGTAAACATGTCA
ACATCGACTAAACTTGATGTAGCAGTGGCTAGTGATGAAGAAAGACTAGAACCAGATATG
GATCGTGGTTTGATGGTCGGTGTTGAAAATTACCCAAATCATTCTTTTTACAAATTGAAG
GGTGAAAACTCATTTAACAAGGGTGTAACCGACGACAAAAGTTTGAATATGGGATACGCG
ACAAGTTTGGATAATAGTTCTACTGAGACAGAGGCTATGGAAATCGAGCATGGGAAGCTA
GAGAAGGTTGAAAAAGTAGGAAGCACTTATAATTTTGATGATGATCCAAAAGCAACAGCT
GGTTTGGAATTGGGAGGGGTTCAAAACAGAGCATCACCAGGAGATTTTACAGCAGAAGTT
GAAAAGTTGGATGTAAACTCAACAGCTTCTGAGTCAATCTCAGCTGCCAACTTATCTTCC
ACCGCTGATGTCAGACAAACAACTGAAACTCAACCCATGAATCCTAAGGTATCCAAACAA
CCTCCAGCAAGTATTCCAACTAATAATTTATCTGCGGCAGATATTTCCATATTGAAGAGG
TGGAATAGGCGGCCTACGTCAATATCCAAGATGGATTTATTACTGCTTCAGAGTCGTGTT
TCTTCTCGTTCTATGAGACCGTCATCATCTTCTGTACGTGATCGTGAACTTCTATCTGCA
AAAGTAGAGATTGAAAATGCTCCTGTTTCCTGGAATACTCCAGAACTTCATGCATCTGTA
TTTCGAAATGTTTCTATATTTAAAAGGAGCTACGAATTGATGGAAAGCCTTCTCAAAGTT
TATATCTATAAAGAAGGAGAAAAACCAATATTCCATCAGCCAATCATGAGGGGAATTTAT
GCCTCAGAAGGATGGTTCATGAAATTGATGGAGGGAAATAGAAAATTTGTTGTAAGAGAC
CCAAGGAAAGCTCACTTGTTTTACCTACCCTTCAGTTCACAGATGCTACGGATAGCACTA
TCTGAACAAAAACTCCAGAATCATCAGGACTTGCAGAATTATTTGAAGACCTATGTGAAG
ACCATTTCCAGAAAATATAGATTCTGGAACAGAACTGGAGGGACAGATCATTTTGTTGTC
GCTTGTCATGATTGGGCTCCAAAATTCACAGGGCAACACTTGCGGAATTGTATTAAAGCT
CTTTGCAATGCAGATGTTAGTAAAGGGTTCAAAATAGGCATGGATACCAGTCTCCCTGTT
ACATACATACGTTCCGCAGAGGCTCCTCTGGACAATCTTGGAGGCAATCCTCCTCTAAAA
AGATCTACTTTAGCTTTCTTTGCTGGAAGGATGCATGGTTATCTACGGCCGATCCTTCTA
AACTTTTGGGAGAATAAAGTAGATGATATGAAAATCTTTGGCCCAATGCCTCACGATGTT
GAAGGCAAAAGAATTTACAGGGAGCACATGAAGAGCAGCAAGTATTGCATATGTGCAAGG
GGCTATGAAGTTCACACGCCTCGAGTGGTTGAGGCCATCTTCTACGAGTGTGTGCCGGTC
ATCATATCAGATAATTATGTTCCGCCTTTCTTTGAGGTACTGAACTGGGAGGCATTCTCG
GTTTTTGTTCAAGAGAAGGATATCCCAAATTTGAGAAACATTTTGCTCTCCATCCCAGAA
GAGAGATACCTAGCAATGCAGTCGAGAGTTAAGATGGTGCAAAAGCATTTCCTTTGGCAC
AAAAAGCCAAAGAAATATGACATATTCCATATGGTCCTTCACTCTATCTGGTACAATAGA
TTGTTCAACACAAGAACCAAATGA

Peptide Sequence

PEP ID

orange1.1t03831.1
PEP Infomation
Sequence

MDIIAKFHGSCRAEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMVVGNSNTSVVNMS
TSTKLDVAVASDEERLEPDMDRGLMVGVENYPNHSFYKLKGENSFNKGVTDDKSLNMGYA
TSLDNSSTETEAMEIEHGKLEKVEKVGSTYNFDDDPKATAGLELGGVQNRASPGDFTAEV
EKLDVNSTASESISAANLSSTADVRQTTETQPMNPKVSKQPPASIPTNNLSAADISILKR
WNRRPTSISKMDLLLLQSRVSSRSMRPSSSSVRDRELLSAKVEIENAPVSWNTPELHASV
FRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRD
PRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVV
ACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLK
RSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICAR
GYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPE
ERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYNRLFNTRTK*

Transcript Sequence

Transcript ID

orange1.1t03831.1
Transcript Infomation

gene=orange1.1t03831 CDS=236-2179
Sequence

TTTCTTAAAAATTAGGGGAGGCAAGTGATAATTCCCTTGTTACTATTACTCTCTCACCTA
AAACACTACTGAGCTCAAGTGCTGAACTCAGTTACCGACGCATAGGTCAACGCCTGCAGT
TCATCTCGGGTTGGGTCTGACCATGCGGAATCTCCACGGAACATATGATTTGGTGCTGAG
TGTTGGAGTGCTGTTGATGGATTGGATAAAATACTAGTTATCACAATCCTGTAATATGGA
TATCATTGCAAAATTTCACGGGTCATGCCGTGCTGAAATCAGGAGATTGCTGGTGATTAC
TGGCATGGTAGTGGCTGTTATGGTTGTTTTTCAGAGTTTCTCACTAGTGACTAATAAGGG
TTCCATTGTGATGATGGTGGTTGGCAATAGCAATACATCTGTTGTAAACATGTCAACATC
GACTAAACTTGATGTAGCAGTGGCTAGTGATGAAGAAAGACTAGAACCAGATATGGATCG
TGGTTTGATGGTCGGTGTTGAAAATTACCCAAATCATTCTTTTTACAAATTGAAGGGTGA
AAACTCATTTAACAAGGGTGTAACCGACGACAAAAGTTTGAATATGGGATACGCGACAAG
TTTGGATAATAGTTCTACTGAGACAGAGGCTATGGAAATCGAGCATGGGAAGCTAGAGAA
GGTTGAAAAAGTAGGAAGCACTTATAATTTTGATGATGATCCAAAAGCAACAGCTGGTTT
GGAATTGGGAGGGGTTCAAAACAGAGCATCACCAGGAGATTTTACAGCAGAAGTTGAAAA
GTTGGATGTAAACTCAACAGCTTCTGAGTCAATCTCAGCTGCCAACTTATCTTCCACCGC
TGATGTCAGACAAACAACTGAAACTCAACCCATGAATCCTAAGGTATCCAAACAACCTCC
AGCAAGTATTCCAACTAATAATTTATCTGCGGCAGATATTTCCATATTGAAGAGGTGGAA
TAGGCGGCCTACGTCAATATCCAAGATGGATTTATTACTGCTTCAGAGTCGTGTTTCTTC
TCGTTCTATGAGACCGTCATCATCTTCTGTACGTGATCGTGAACTTCTATCTGCAAAAGT
AGAGATTGAAAATGCTCCTGTTTCCTGGAATACTCCAGAACTTCATGCATCTGTATTTCG
AAATGTTTCTATATTTAAAAGGAGCTACGAATTGATGGAAAGCCTTCTCAAAGTTTATAT
CTATAAAGAAGGAGAAAAACCAATATTCCATCAGCCAATCATGAGGGGAATTTATGCCTC
AGAAGGATGGTTCATGAAATTGATGGAGGGAAATAGAAAATTTGTTGTAAGAGACCCAAG
GAAAGCTCACTTGTTTTACCTACCCTTCAGTTCACAGATGCTACGGATAGCACTATCTGA
ACAAAAACTCCAGAATCATCAGGACTTGCAGAATTATTTGAAGACCTATGTGAAGACCAT
TTCCAGAAAATATAGATTCTGGAACAGAACTGGAGGGACAGATCATTTTGTTGTCGCTTG
TCATGATTGGGCTCCAAAATTCACAGGGCAACACTTGCGGAATTGTATTAAAGCTCTTTG
CAATGCAGATGTTAGTAAAGGGTTCAAAATAGGCATGGATACCAGTCTCCCTGTTACATA
CATACGTTCCGCAGAGGCTCCTCTGGACAATCTTGGAGGCAATCCTCCTCTAAAAAGATC
TACTTTAGCTTTCTTTGCTGGAAGGATGCATGGTTATCTACGGCCGATCCTTCTAAACTT
TTGGGAGAATAAAGTAGATGATATGAAAATCTTTGGCCCAATGCCTCACGATGTTGAAGG
CAAAAGAATTTACAGGGAGCACATGAAGAGCAGCAAGTATTGCATATGTGCAAGGGGCTA
TGAAGTTCACACGCCTCGAGTGGTTGAGGCCATCTTCTACGAGTGTGTGCCGGTCATCAT
ATCAGATAATTATGTTCCGCCTTTCTTTGAGGTACTGAACTGGGAGGCATTCTCGGTTTT
TGTTCAAGAGAAGGATATCCCAAATTTGAGAAACATTTTGCTCTCCATCCCAGAAGAGAG
ATACCTAGCAATGCAGTCGAGAGTTAAGATGGTGCAAAAGCATTTCCTTTGGCACAAAAA
GCCAAAGAAATATGACATATTCCATATGGTCCTTCACTCTATCTGGTACAATAGATTGTT
CAACACAAGAACCAAATGAAGATGAGGGGGGTTTTAAATTCTTGCTTCATGAAAGCCGCA
AGCGTACAACATGCCGATTGCCGAAGCTGATGGAGTTTGTTTGAAATTTCAGGAGCCGGG
GACCTCCTAGTTAACTTTGAGTCTGTGACTTGTATTTCCGATTGTCGCAGATGAATGATC
AGAATGTTGACCTTGTGGCAATCTTTCCTTTCGTGGTTATTTTCGCAGCGCCATCACTAG
ATGAAGTAAACATCACATTTGCTGCCACAAGGTTATTATATATCCGCTGCTTTTCTTGTA
AATAAATTGGTTCAGATTTGCACACCAGAGTCCAAATTTGTTTATTGAGGTTGATGGTGC
AAATTATATAAATGATTCAACTGTGAAATATTAGCGAATCCCGTCGTTTTTTCTATA