Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	orange1.1t03774.1
CDS Infomation	gene=orange1.1t03774
Sequence	ATGTTGAATCCACAAGTTCATCATCAGTCTCAATCTATCAGAACCCTATGTCCATTACCC AAGCCATTTCTCCGTGGAAATGGTCAGGCTTTTCGTCCAGCTCAGTTGAATCCTTCATTC AAAAAAGCATCCAAAATCGGAGTCGGCTTTTCTCCTAGTAATAACAGTATCAAAGCTATA TTTAATTTGACTGAAAAGTCTACCAAAGTTAAGGCTGTTATCACTGTGAAACCAATTATC CCTGATCCTTTAGCACTTTCCAGTTTAGTTGGTGCACTTGGCTTGGAGCTTGTTAGCGCC GAGCTTGATCCAAAAACGGGAGAAGAGAAACCCACCATCAAAGGTCTTGCACTTGGGGTA CTGGGCAAGGATGACGATGGAAACATAAAATATAAAGCAGAATTAAAAATTCCAGCAAGT TTTGGAGATGTCGGTGCCATATTAGTGGAATCTGATCAACTCACAGAAATGTATTTGCAG GATATTGTTCTTGATGGTCTCCCAAATGGTCCTGTGAATTTAACTTGTGATTCATGGATT CAGCCAAAAATAGTTGACAAACAAAAGAGAATTTTCTTTACTAATAAGTCATACTTGCCC TCACAAACACCGAACGGATTAAAGAGGTTAAGAGCCGAAGAGCTTAACAATTTGCAAGGC GATGGACAAGGAGAGCGTAAAAGACACGAAAGAATATACGATTATGATGTGTACAATGAT CTTGCATTACCTGAAATCAAAGAGTTGGCACGACCAGTGCTTGGTGGCGAAGAGCACCCT TATCCAAGGCGTTGCAGAACTGGACGTCCTAAAAGTTTTGCCGATCCAGCCTCAGAGTCA AGGAGCGTCAGTATCTATGTGCCCAGAGATGAAGCATTCGCAGATATAAAATTAGGGCAG TTTTCAGCTTCGTCACTATACTCAGGGTTGCATGCATTGGTGCCATTCTTAGAAGCCATC CTTATCGATAAGGATCTAGGATTTTCATCACTCTCGGATATTGACAAAGTCTTTAACGAA GGAATTGAGCTGCCTCCGGAACTCAAAGATCAACCTTTATGGCAAAAAATTCTTCCCATA TTGTTTAAGACCGTTTCTAATACAGGCAAAGAGGTTTTTCGGTTCGACACGCCAGAAACA GTGGATAGAGATAAATTCTTTTGGATAAGGAACGAGGAATTTGGTAGAGAGACTCTAGCT GGTCTCAACCCATACAGCATTAAATTGCTCTCGCAATTGCCACTAAAAAGCACGCTTGAT CCTGAAATTTACGGCCCACCGGAATCAGCAATTACCACAGAATTGATTGAGCAAGAAATT GGAGGCTTGATGACTGTTAACGAGGCTATAAAACAAAAAAAGTTGTTCATCATAGATTAC CATGATGCGTTATTACCGTATGTGGGGAAACTGAGACAGATCGAAGGCTCTACGCTGTAC GGATCTCGAGCACTCTTCTTCTTGAACCCAGATGGCACATTGAGACCACTAGCCATCGAG CTAACTCGGCCTCCATTGGACGGCAAGCCACAATGGAAACAAGTGTTCACACCCAGTAGG CATTCTACTGACTCCTGGCTTTGGACGCTAGCAAAGGCTCATTTCCTTGTTCACGATACC GGCTATCACCAGCTCATTAGCCATTGGTTAAGAACTCATTGTTGCGTTGAACCTTACATA ATTGCAGCCAACCGGAAACTCAGTGCAATGCATCCAATCAATAGACTGTTAAAACCTCAT TTCCGTTACACAATGGAGATCAACGCTAAAGCTCGACTTATTCTTGTTAATGCTGGTGGA CTCGTTGAAACCACATTCTTTCCTGGAAAATACTCTATGGAGTTCAGCTCTGTAATCTAT GACAAGCAGTGGAGGTTTGACCATGAAGCACTACCCAAAGACCTTATTAGCAGGGGAATG GCTGTTGAAGATCCAAACGCTCCACACGGCCTAAAGCTAACAATCGAAGACTACCCATTT GCCAACGATGGACTCGATCTCTGGGATGCCTTAAAACAATGGGTTACTGAGTATGTGAAT CACTACTATACCGATCCAAGTCTTGTAGAGTCTGATGAAGAGCTCCAAGCGTGGTGGACT GAAATTCGAACTGTGGGACACGCCGACAAAAAGGATGAACCATGGTGGCCTGTCCTGAAA ACTCCTCAGGATTTAATTGAAATAGTCACAACTATCGCTTGGGTAGCATCTGGTCAGCAT GCAGCTGTGAACTTTGGGCAATATTTATACGGAGGCTATTTCCCTAACAGGCCTACTATG TCAAGAACCAACATGCCTACTGAAGATCAATCAGAAGCAGACTGGAAATCCTTTCTCGCA AATCCTGAAGATACACTTTTGCAATGCTTTCCTTCAAAGATGCAAGCTATGCAAGATATG GTCATTCTGGATACGCTGTCGACTCATTCGCCTGATGAGGAGTATTTGGGGAAGGAAATG GAGCCCGCCTGGGGTGATGACCCAGTTATAAAGGCTGCATTTGAAAAGTTTAATCGCAAG ATGCAGGAGCTTGAAGGGATCATTGATGACAGAAATTCGAATGAGAATTTGAGGAACAGA ACTGGGGCTGGGATCGTGCCATATGAGCTCTTGAAGCCATTTTCGGGACCTGGTGCAACA GGAAAAGGAGTTCCGTACAGCATCTCCATCTAG

Peptide Sequence

PEP ID	orange1.1t03774.1
PEP Infomation
Sequence	MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAI FNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGV LGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWI QPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYND LALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQ FSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPI LFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLD PEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLY GSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDT GYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGG LVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPF ANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLK TPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLA NPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKFNRK MQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI*

Transcript Sequence

Transcript ID	orange1.1t03774.1
Transcript Infomation	gene=orange1.1t03774 CDS=36-2708
Sequence	AGTCACCAAGCCAAAGGTCTCTTACTTGTGAAAGAATGTTGAATCCACAAGTTCATCATC AGTCTCAATCTATCAGAACCCTATGTCCATTACCCAAGCCATTTCTCCGTGGAAATGGTC AGGCTTTTCGTCCAGCTCAGTTGAATCCTTCATTCAAAAAAGCATCCAAAATCGGAGTCG GCTTTTCTCCTAGTAATAACAGTATCAAAGCTATATTTAATTTGACTGAAAAGTCTACCA AAGTTAAGGCTGTTATCACTGTGAAACCAATTATCCCTGATCCTTTAGCACTTTCCAGTT TAGTTGGTGCACTTGGCTTGGAGCTTGTTAGCGCCGAGCTTGATCCAAAAACGGGAGAAG AGAAACCCACCATCAAAGGTCTTGCACTTGGGGTACTGGGCAAGGATGACGATGGAAACA TAAAATATAAAGCAGAATTAAAAATTCCAGCAAGTTTTGGAGATGTCGGTGCCATATTAG TGGAATCTGATCAACTCACAGAAATGTATTTGCAGGATATTGTTCTTGATGGTCTCCCAA ATGGTCCTGTGAATTTAACTTGTGATTCATGGATTCAGCCAAAAATAGTTGACAAACAAA AGAGAATTTTCTTTACTAATAAGTCATACTTGCCCTCACAAACACCGAACGGATTAAAGA GGTTAAGAGCCGAAGAGCTTAACAATTTGCAAGGCGATGGACAAGGAGAGCGTAAAAGAC ACGAAAGAATATACGATTATGATGTGTACAATGATCTTGCATTACCTGAAATCAAAGAGT TGGCACGACCAGTGCTTGGTGGCGAAGAGCACCCTTATCCAAGGCGTTGCAGAACTGGAC GTCCTAAAAGTTTTGCCGATCCAGCCTCAGAGTCAAGGAGCGTCAGTATCTATGTGCCCA GAGATGAAGCATTCGCAGATATAAAATTAGGGCAGTTTTCAGCTTCGTCACTATACTCAG GGTTGCATGCATTGGTGCCATTCTTAGAAGCCATCCTTATCGATAAGGATCTAGGATTTT CATCACTCTCGGATATTGACAAAGTCTTTAACGAAGGAATTGAGCTGCCTCCGGAACTCA AAGATCAACCTTTATGGCAAAAAATTCTTCCCATATTGTTTAAGACCGTTTCTAATACAG GCAAAGAGGTTTTTCGGTTCGACACGCCAGAAACAGTGGATAGAGATAAATTCTTTTGGA TAAGGAACGAGGAATTTGGTAGAGAGACTCTAGCTGGTCTCAACCCATACAGCATTAAAT TGCTCTCGCAATTGCCACTAAAAAGCACGCTTGATCCTGAAATTTACGGCCCACCGGAAT CAGCAATTACCACAGAATTGATTGAGCAAGAAATTGGAGGCTTGATGACTGTTAACGAGG CTATAAAACAAAAAAAGTTGTTCATCATAGATTACCATGATGCGTTATTACCGTATGTGG GGAAACTGAGACAGATCGAAGGCTCTACGCTGTACGGATCTCGAGCACTCTTCTTCTTGA ACCCAGATGGCACATTGAGACCACTAGCCATCGAGCTAACTCGGCCTCCATTGGACGGCA AGCCACAATGGAAACAAGTGTTCACACCCAGTAGGCATTCTACTGACTCCTGGCTTTGGA CGCTAGCAAAGGCTCATTTCCTTGTTCACGATACCGGCTATCACCAGCTCATTAGCCATT GGTTAAGAACTCATTGTTGCGTTGAACCTTACATAATTGCAGCCAACCGGAAACTCAGTG CAATGCATCCAATCAATAGACTGTTAAAACCTCATTTCCGTTACACAATGGAGATCAACG CTAAAGCTCGACTTATTCTTGTTAATGCTGGTGGACTCGTTGAAACCACATTCTTTCCTG GAAAATACTCTATGGAGTTCAGCTCTGTAATCTATGACAAGCAGTGGAGGTTTGACCATG AAGCACTACCCAAAGACCTTATTAGCAGGGGAATGGCTGTTGAAGATCCAAACGCTCCAC ACGGCCTAAAGCTAACAATCGAAGACTACCCATTTGCCAACGATGGACTCGATCTCTGGG ATGCCTTAAAACAATGGGTTACTGAGTATGTGAATCACTACTATACCGATCCAAGTCTTG TAGAGTCTGATGAAGAGCTCCAAGCGTGGTGGACTGAAATTCGAACTGTGGGACACGCCG ACAAAAAGGATGAACCATGGTGGCCTGTCCTGAAAACTCCTCAGGATTTAATTGAAATAG TCACAACTATCGCTTGGGTAGCATCTGGTCAGCATGCAGCTGTGAACTTTGGGCAATATT TATACGGAGGCTATTTCCCTAACAGGCCTACTATGTCAAGAACCAACATGCCTACTGAAG ATCAATCAGAAGCAGACTGGAAATCCTTTCTCGCAAATCCTGAAGATACACTTTTGCAAT GCTTTCCTTCAAAGATGCAAGCTATGCAAGATATGGTCATTCTGGATACGCTGTCGACTC ATTCGCCTGATGAGGAGTATTTGGGGAAGGAAATGGAGCCCGCCTGGGGTGATGACCCAG TTATAAAGGCTGCATTTGAAAAGTTTAATCGCAAGATGCAGGAGCTTGAAGGGATCATTG ATGACAGAAATTCGAATGAGAATTTGAGGAACAGAACTGGGGCTGGGATCGTGCCATATG AGCTCTTGAAGCCATTTTCGGGACCTGGTGCAACAGGAAAAGGAGTTCCGTACAGCATCT CCATCTAGAGTGCGCAAAGCTCATTGCAAATAAAACTTTAAGAAATAAAATGTCACTTTT GTTTAACCTAAATAAGTTCCGCTTGTCCGAACTTTTTCAAGCAAGCACAACACCAAAACT TTCAGCGAGCTCATTGCACAGTTTTGGTAGTTTACGTTTGTATTTTATGTTGCATGTGAG TCCTATCCACGATATTATGTTATGATACTAATGTAAAAGTCAAGCAAAATATTAAATTTT TT