Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03675.4
CDS Infomation

gene=orange1.1t03675
Sequence

ATGCGTGCACCATCATTGCTCGCACAATGCTTGCCAGGCTTGGCACCTCAAGACCGGGGA
AATCATAGCATGTCTTCAACCATTTCAGAAAAGGATGCGCATCTCCCTTGTCCAGCTGTC
GAAATTCTTCCTTCAAAGGTTGCTCACCTATATAAATATGCTGGAGATAATGTAGACTTG
CAAGCGATTAGTATGTTCAAGGGAAAAGTTAGTGTCGCTGATATTATTGGGTTTACGGGT
TCCGAAATGATATCCTCAAAACCTGATGGGTTTCTGAAATGTTGGGAAAGCTCTATTGAT
CTTGTTAATGTTCTTAAGCATGAGATTCGTGATGGACAACTGAGCTTTAGAGGCAAAAGG
GTACTCGAGTTGAGCTGTGGCTATGGACTTCCTGGGATTTTTGCTTGCCTGAAGGGTGCT
GGTACTGTACACTTTCAAGATCTCAGTGCAGAAACAATAAGATGCACAACTGTACCAAAT
GTCCTTGCCAATCTTGAGCAAGCTCGGGAGAGGCAGAGCCGACAACCAGAGAGTTCCCTG
ACGCCATCAAGGCAAACTCTGGCACCATCAGTGCACTTCTACGCTGGTGATTGGGAAGAA
CTACCCACAGTTTTATCTGTTGTGAGGAACGATGTTTCTGAAGTCACAACAGGGATGAGC
CTGAGCTTCTCTGAGGAGGATTTCATGGATGGGTGTAGTAGCCAAGATGGAAGCATCATC
GGACAGGACTCCTCCTCAAGACGCTCAAGGAAGCTTTCTGGAAGCCGGGCATGGGAGAGG
GCTAGCGAGGCAGATCAGGGTGAAGGTGGTTATGATGTTATTTTGTTGACAGAGATCCCA
TATTCAGTGACCTCACTGAAGAAATTATATTTACTAATTAAAAAGTGTTTGAGGCCTCCA
TATGGAGTAGTATACTTAGCAACAAAGAAGAATTATGTCGGTTTCAATAACGCAGCACGG
CACCTGAGGAGTCTGGTTGACGAGGAAGGCATTTTTGGAGCCCATTTAATTAAGGAGATG
ACTGATAGAGATATTTGGAAGTTCTTTCTGAAGTGA

Peptide Sequence

PEP ID

orange1.1t03675.4
PEP Infomation
Sequence

MRAPSLLAQCLPGLAPQDRGNHSMSSTISEKDAHLPCPAVEILPSKVAHLYKYAGDNVDL
QAISMFKGKVSVADIIGFTGSEMISSKPDGFLKCWESSIDLVNVLKHEIRDGQLSFRGKR
VLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSL
TPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSII
GQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPP
YGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIKEMTDRDIWKFFLK*

Transcript Sequence

Transcript ID

orange1.1t03675.4
Transcript Infomation

gene=orange1.1t03675 CDS=854-1909
Sequence

CAAGGGGTCCAGCCAGAGAAGGTCTCTGAAGTCTGAATGGAAGCTTCTGCGATTCTCTCT
TGGGCTTTGCTCTTCTTTTTTGACTTTTGAATTTCTTTTCTCTGAAATGGCAGACTTTGT
TTACTTTTTATTCATCTTTTTTCCTTTTTGGTTATAAAAATAGAAAAAATTAAGAGCCTT
TACCATCTATGAGAGTTTCTGTAAGTGAAGATTCTTCAGAGGTAAAATCCTTCATTGTTG
ATGCGGATTGCATGACTTTTGGAACTTTAATTCCGGGTTTTGTTCTTCTATGCAATTTGA
TCATGTGGGCTGATACTCATTTACTTAATTACACACGTTATTACCTGTTTTGAAAAAAAA
AAGATTTTGTAAATGTTTTATATGATCTGTTGGTATAATCAAGCTTAAAATAGCTTATTT
AGTTTTGTTAAATTTCTTCATTATTAATTGATTCATTTGGTTTTTTTAGGGGATTCAATT
GGAGATGTGTGTTGATCTTGTGATGTTTGTCTTTCTAGATGTTAAATTATTATTATTTTT
TGTTATCAATGCTTAAAAGTTTCATTTTTTCCTTCCACTTAACCTGATTCTTCAGTTGGT
TTTGACTTCCTATGTATTTTTTTATTGGAATTTTGTCTTTGGTTGTACTAGTTATTGATG
ATGCTTGGAGTTTCTGGTCATAGATTTTGAGCTGGAAAGTGGAAATTAATTCTTAATTAC
TTCAATCTGCATTGCTTGTTATTACTACTTTAATTTCTTTAGTAAATGATCTAGTTGTTA
ATTGTAAACAGTTCGCCCCCTTTCCCCAACAGGTTGTTATATCTTGAGTGTATTTTGAAA
AGATCAAGGAAAAATGCGTGCACCATCATTGCTCGCACAATGCTTGCCAGGCTTGGCACC
TCAAGACCGGGGAAATCATAGCATGTCTTCAACCATTTCAGAAAAGGATGCGCATCTCCC
TTGTCCAGCTGTCGAAATTCTTCCTTCAAAGGTTGCTCACCTATATAAATATGCTGGAGA
TAATGTAGACTTGCAAGCGATTAGTATGTTCAAGGGAAAAGTTAGTGTCGCTGATATTAT
TGGGTTTACGGGTTCCGAAATGATATCCTCAAAACCTGATGGGTTTCTGAAATGTTGGGA
AAGCTCTATTGATCTTGTTAATGTTCTTAAGCATGAGATTCGTGATGGACAACTGAGCTT
TAGAGGCAAAAGGGTACTCGAGTTGAGCTGTGGCTATGGACTTCCTGGGATTTTTGCTTG
CCTGAAGGGTGCTGGTACTGTACACTTTCAAGATCTCAGTGCAGAAACAATAAGATGCAC
AACTGTACCAAATGTCCTTGCCAATCTTGAGCAAGCTCGGGAGAGGCAGAGCCGACAACC
AGAGAGTTCCCTGACGCCATCAAGGCAAACTCTGGCACCATCAGTGCACTTCTACGCTGG
TGATTGGGAAGAACTACCCACAGTTTTATCTGTTGTGAGGAACGATGTTTCTGAAGTCAC
AACAGGGATGAGCCTGAGCTTCTCTGAGGAGGATTTCATGGATGGGTGTAGTAGCCAAGA
TGGAAGCATCATCGGACAGGACTCCTCCTCAAGACGCTCAAGGAAGCTTTCTGGAAGCCG
GGCATGGGAGAGGGCTAGCGAGGCAGATCAGGGTGAAGGTGGTTATGATGTTATTTTGTT
GACAGAGATCCCATATTCAGTGACCTCACTGAAGAAATTATATTTACTAATTAAAAAGTG
TTTGAGGCCTCCATATGGAGTAGTATACTTAGCAACAAAGAAGAATTATGTCGGTTTCAA
TAACGCAGCACGGCACCTGAGGAGTCTGGTTGACGAGGAAGGCATTTTTGGAGCCCATTT
AATTAAGGAGATGACTGATAGAGATATTTGGAAGTTCTTTCTGAAGTGAACAGAAGGTCA
CCGGTTGTCAAACTACCCGGCCAAACTCATTTATTGATAATACTCCAATATGTATAAACG
CAGATCACAAGTCCTTTTTTTGTTTTTTTGGTTAAATTTTTTGCTAGTAATAAGTAAAGC
GGAATCAGAAAGCTGTGTAATAGGTAAATATGCTTCTAATACTGCGGCGATGGCTTATTC
TTTTTTTCTTTTATCTATTTTTTTTTTTATTTACAGTTATTGCTATCTAAAGTGTAAATT
GATGATACTTAAATTCCAAAGTCGACAATGAAGATTCTTAATTTCTCCTGTTTTTCGTGT
TTTGA