Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03416.3
CDS Infomation

gene=orange1.1t03416
Sequence

ATGTTATTGGCCGGGTCGGGTCCTTCATTTAATGAAGCTGTTAAACATGCTGCTTCTTCT
CACCCTTCAATCTCTCAGGTGCTTGTAGCTGATTCAGATAAATTTGCATATCCTATTGCT
GAACCTTGGGCTAAACTAGTCCATATGATTCAGCAGAGAGAAAAATACTCGCACATAATT
TCTGCTTCAGGTTCATTCGGCAAAAACGTACTTCCTCGTGCAGCTGCACTATTGGATGTT
TCTCCAATTACTGATGTTATTGAAATTTCTGGTTCTAGTCAATTCGTCAGGCCAATTTAT
GCTGGAAATGCGCTGTGTACAGTTCGATACACTGGTGCCAACCCTTGTATGTTGACCGTC
AGAGCCACATCTTTCCCAATGCCCAAGAGTTCAGCTGAATCAAGATCTAATGGGGCTTCT
ATTTCCCAGGTTGATCTCTCAGCTTTAGATGAAGATTCTATTGGAAAATCTAGATATGTA
AAGCATACATCTCAGGATGCAGAACGCCCTGATCTTGGAAGTGCACGTATTGTAGTCACT
GGGGGACGAGGTTTGAAAAGTGCTGAGAACTTCAAAATGATAGAAAAGCTTGCGGAGAAA
CTTGGGGCAGCAGTTGGGGCTACTCGTGCTGTAGTTGATGCTGGATTTGTTCCTAATGAT
CTACAGGTCGGTCAAACCGGGAAAATTGTTGCTCCAGAATTGTATATGGCTTTTGGTGTT
TCAGGAGCCATTCAACATTTAGCTGGCATGAGAGATTCTAAGGTCATTGTTGCTGTAAAT
AAGGATGCAGATGCACCAATTTTCCAGGTAGCTGACTACGGACTCGTTGGCGATCTTTTT
GAAGTGATTCCAGAGTTGCTAGAAAAGTTCCCGGAGAAAAAATAG

Peptide Sequence

PEP ID

orange1.1t03416.3
PEP Infomation
Sequence

MLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHII
SASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTV
RATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVT
GGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGV
SGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK*

Transcript Sequence

Transcript ID

orange1.1t03416.3
Transcript Infomation

gene=orange1.1t03416 CDS=150-1034
Sequence

TCAGCTTTTTTTATTTATGCAATTTTTATAATGTTGAAAAATAGATTAGTACGTTGGTTT
TAGGCGAGCATGAAAACGGTTCCATCAAGTCACAATCGTTGAGTGCAGTAGAGGCTGCAA
AGTCATTGAGTGATGATAATTCAGTATCCATGTTATTGGCCGGGTCGGGTCCTTCATTTA
ATGAAGCTGTTAAACATGCTGCTTCTTCTCACCCTTCAATCTCTCAGGTGCTTGTAGCTG
ATTCAGATAAATTTGCATATCCTATTGCTGAACCTTGGGCTAAACTAGTCCATATGATTC
AGCAGAGAGAAAAATACTCGCACATAATTTCTGCTTCAGGTTCATTCGGCAAAAACGTAC
TTCCTCGTGCAGCTGCACTATTGGATGTTTCTCCAATTACTGATGTTATTGAAATTTCTG
GTTCTAGTCAATTCGTCAGGCCAATTTATGCTGGAAATGCGCTGTGTACAGTTCGATACA
CTGGTGCCAACCCTTGTATGTTGACCGTCAGAGCCACATCTTTCCCAATGCCCAAGAGTT
CAGCTGAATCAAGATCTAATGGGGCTTCTATTTCCCAGGTTGATCTCTCAGCTTTAGATG
AAGATTCTATTGGAAAATCTAGATATGTAAAGCATACATCTCAGGATGCAGAACGCCCTG
ATCTTGGAAGTGCACGTATTGTAGTCACTGGGGGACGAGGTTTGAAAAGTGCTGAGAACT
TCAAAATGATAGAAAAGCTTGCGGAGAAACTTGGGGCAGCAGTTGGGGCTACTCGTGCTG
TAGTTGATGCTGGATTTGTTCCTAATGATCTACAGGTCGGTCAAACCGGGAAAATTGTTG
CTCCAGAATTGTATATGGCTTTTGGTGTTTCAGGAGCCATTCAACATTTAGCTGGCATGA
GAGATTCTAAGGTCATTGTTGCTGTAAATAAGGATGCAGATGCACCAATTTTCCAGGTAG
CTGACTACGGACTCGTTGGCGATCTTTTTGAAGTGATTCCAGAGTTGCTAGAAAAGTTCC
CGGAGAAAAAATAGATGTGTGCGCGCTCAAATTCCAGGTCCCGGAGAAAAAATAGATGTG
TGCGCGCTCAAATTCCAGGTCCAATTGCTAAAAAATAAGTGATAAAAGAAATAATACATT
GCTGATTTTTTTTTTATAAATAATTTCGGGTGAGATAAAAAAGTTATAAGTAACATGGTG
GTTCATTGATTCTTAATGAAAAAATTTTAAAAAATT