Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03399.5
CDS Infomation

gene=orange1.1t03399
Sequence

ATGGTTCGAAGCATCAAGAACCCCAAGAAGGCCAAAAGAAAGAACAAGGTCGCAAAAAAA
GGAGATGGGTCATCTTCTTCTTCAATTCCGAGTTTACCAACAAAGGTGTGGCAACCAGGA
GTTGACAAGTTAGAGGAAGGAGAGGAGCTTCAATGTGACCCTACTGCCTATAATTCCCTT
CACGCCTTTCACATTGGTTGGCCTTGTTTAAGCTTTGACATTGTGCGTGATACCTTGGGT
TTAGTACGGAATGAGTTTCCACATACAGCGTATTTTGTTGCAGGGACTCAGGCAGAGAAA
CCTTCTTGGAACTCTATTGGAGTATTTAAAGTCTCTAACATTTCTGGAAAGAGGCGTGAA
TTAGTACCTAACAAACCCTCTAATGATGATGAAGATGTGGATAGCGAAAGTAGCGACAGT
GATGAAGATAGTGATGATGACGAGGAAGGTGGGTCTGGGACACCGATTTTGCAGTTGCGC
AAGGTAGCTCATCAAGGATGTGTCAATCGTATACGTGCTATGACACAAAATCCTCATATA
TGTGCATCTTGGGCAGATACCGGTCATGTGCAGGTATGGGATCTCCGATCTCATCTAAAT
GCTTTAGCTGAATCAGAAACAATAGTTGGCCAGGGAGCTCCTCAAGTTTCTAATCAGAGT
CCATTAGTGAAGTTTGGTGGCCACAAAGACGAGGGCTATGCTATAGATTGGAATCCCATC
ACAACTGGAAGGCTTGTAACTGGGGACTGCAATAGTTGCATTTATTTATGGGAGCCTGCA
TCTGATGCCACATGGAATGTTGACCCTAATCCTTTCATTGGACATTCTGCAAGCGTAGAA
GATCTACAATGGAGCCCTACTGAACCTGATGTATTTGCCTCATGTTCTGTGGATGGACAT
ATTGCAATTTGGGATACACGTGTGGGGAAGTCAGCCTTAACGTCATTTAAGGCTCATAAT
GCAGATGTGAATGTTATCTCCTGGAACAGGCTGGCTAGCTGTCTGTTGGCATCTGGAAGT
GATGATGGAACATTTTCTATTCATGATCTTAGATTGCTCAAGGTACGTCTTGTTTGA

Peptide Sequence

PEP ID

orange1.1t03399.5
PEP Infomation
Sequence

MVRSIKNPKKAKRKNKVAKKGDGSSSSSIPSLPTKVWQPGVDKLEEGEELQCDPTAYNSL
HAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRE
LVPNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHI
CASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI
TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGH
IAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKVRLV*

Transcript Sequence

Transcript ID

orange1.1t03399.5
Transcript Infomation

gene=orange1.1t03399 CDS=495-1571
Sequence

ACGGCTTTCAGAAAAAGGACAGATGTGCGTACGATGTATCGGGTGCGCGCGTACCGGACT
CGATGATTTCGCTTGGATTTCGACCACCCGGTTAAACTCGACCCGACCCGAATAAGTTAA
ATCAAATAATAATAAAAAACCCCTATAATAAAAATAAAACCCTAGACCCACACTCACCTC
TCGCAGAACCCCAGACGCCACACCTCCAACGGAGCTTCCCCTTCCCGGCCGCCGCATCGA
ACACCGGAAGAACAAGCTTCGCCGTCAACGTCGCTCTCCTCTCTTGCCTGAAGACAAGCT
TTGCCGCAGTCCGTTAACCCTTTCTCGACGGCGCTCTCATTTCTTACCGGCCTCGGACTC
AACCACCCCTCGCCGCCTTCGCTGCCATTCGATCAATCTAGCAAACAACCGGGACTGCAG
TGTCAATAACCTGACAACAAAACCCACGATAGCATCATCAGTTTCAAAACCAACTGAAAA
ATACAAGTGATAAAATGGTTCGAAGCATCAAGAACCCCAAGAAGGCCAAAAGAAAGAACA
AGGTCGCAAAAAAAGGAGATGGGTCATCTTCTTCTTCAATTCCGAGTTTACCAACAAAGG
TGTGGCAACCAGGAGTTGACAAGTTAGAGGAAGGAGAGGAGCTTCAATGTGACCCTACTG
CCTATAATTCCCTTCACGCCTTTCACATTGGTTGGCCTTGTTTAAGCTTTGACATTGTGC
GTGATACCTTGGGTTTAGTACGGAATGAGTTTCCACATACAGCGTATTTTGTTGCAGGGA
CTCAGGCAGAGAAACCTTCTTGGAACTCTATTGGAGTATTTAAAGTCTCTAACATTTCTG
GAAAGAGGCGTGAATTAGTACCTAACAAACCCTCTAATGATGATGAAGATGTGGATAGCG
AAAGTAGCGACAGTGATGAAGATAGTGATGATGACGAGGAAGGTGGGTCTGGGACACCGA
TTTTGCAGTTGCGCAAGGTAGCTCATCAAGGATGTGTCAATCGTATACGTGCTATGACAC
AAAATCCTCATATATGTGCATCTTGGGCAGATACCGGTCATGTGCAGGTATGGGATCTCC
GATCTCATCTAAATGCTTTAGCTGAATCAGAAACAATAGTTGGCCAGGGAGCTCCTCAAG
TTTCTAATCAGAGTCCATTAGTGAAGTTTGGTGGCCACAAAGACGAGGGCTATGCTATAG
ATTGGAATCCCATCACAACTGGAAGGCTTGTAACTGGGGACTGCAATAGTTGCATTTATT
TATGGGAGCCTGCATCTGATGCCACATGGAATGTTGACCCTAATCCTTTCATTGGACATT
CTGCAAGCGTAGAAGATCTACAATGGAGCCCTACTGAACCTGATGTATTTGCCTCATGTT
CTGTGGATGGACATATTGCAATTTGGGATACACGTGTGGGGAAGTCAGCCTTAACGTCAT
TTAAGGCTCATAATGCAGATGTGAATGTTATCTCCTGGAACAGGCTGGCTAGCTGTCTGT
TGGCATCTGGAAGTGATGATGGAACATTTTCTATTCATGATCTTAGATTGCTCAAGGTAC
GTCTTGTTTGACCCACGGGACAACGTTTAAAAAAAAAGAAGTC