Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03262.5
CDS Infomation

gene=orange1.1t03262
Sequence

ATGGCAAACAAGATCAGTGGTCAAGGAACAACGAGGTGCACAGAAACACCGAGACCGCCA
GGCCGCAGCTGTATTACTAAAATACTTGCCGAATTTGCAGACATACCTGTTTCAGGCGTG
GCACGACACGTGTCACACTCTAATGCAGCCATTCCAATTGGCCTCTCCCCTTGCCTTTTT
CTCCTTTCTGTTTGGCTTCAGTTTCTCATTTCATTTTCCATTCCCCCCCACAACAACAAA
CTGCGCACAGAGAGAGACATTCATTCCCATTCCCATTCCCCATTTCCTCTTTCCTCTGAC
CTACGTACGTACCCGACTCTTCTCTCCATTTACGCCGTCGTTTTATCTTTATATTTGCAT
GCATATGCTATAAGAAGTGATCAAGAACAATTTGCAAGGATGGTGGTCAGCTTCAAGTAT
TGGGATGATTGTATTGAAGCTGAGGATTTGAAGGAAATGTGGAAGGAAGTTGAAGTCAGC
ACGGAATGGATAGATGCTGGAGAGGATAGAGGACAGAAAGTTCATCTCTCAAGGGATCCT
GATGGACAGCCTTATTTGACACAGACTGAGATGAGGGCTGTGGCTTATATTGTAGTCCGA
AGACATTTTCGCTCGCAAATAGATCCAGACATGATTTGTGCTATTGCTGAACTTGAAAGT
GACAGACAACTCCTTGCCGTTCGGTATGACAAAAAGTCTAAGGAGGCTAAAGTAGGCCTC
ATGCAAATCACTCATAAGAATGCAGTGTGGCTGTTTAGTGAGATGGGTTACCGATTATAT
GATGTAGAGCAGAATCCAGACCTTCTATTCAGGCCTCTCGTTAGTATATATTTTGGAGCT
GCTTACCTTAAATGGCTATCAACCTTTCAGGACAAAGAAAGAACCGAAGAATTTGTTATT
AGGGCCTATAAAGGTGGTACGAAAAAGGCAACTCACAAATCGACTTTGCCATATTGGAAG
AGCTATATATCAGTGAAAGAAAGCCTTCCATCAAGAAAATTCTTTGATGATGGTCCTTCG
CCAGCTAATGCTTCTGGTGCTCCTCCACCTGTACATGCAGGTGCTTCAGAAAGCTCAGGT
ACTGAGTATTGGGACTCTATAACGACTCCTGAAGACATGGAACAGATGTGGGCTCATCCT
GATGTTGTTAAAGAGTGGACAAGATCTGGAGAAAAAAGGGGAAAAGTGCGATTTTCACAT
GATGCAAAGAAGAGATCCTATCTTTCCCGAGTAGAATTGAAGGCAGTAGCAGAAATCATT
CTTTCAAAGTACTTCAGTACCAAGGGTGTTAAACCTACATATCTTTGTGCTATTGCTGAG
ATGGTTAGCATGCGTTTTGTGAATGGTGTTTCACCGCGAATTGGCTTAATGGGAATCGAT
TACTCTACAGCTTTCTGGATTTACATGGAGTTGGGCTACAGAGCTTACAAAGTTGATTCT
GCAGATGATCTAACTAAACCATTTGTGTCCATGTACTTTGGTGCTGCCTATTTGTCCTAT
CTATCAGAATATGAAGGGAAGGAAAGAACTCCACAGTTTGTTGTTCAGGCATATCTCGAA
GGGCCTAAGAATGTGAATCTTCAAGAAACTGGTCCTTCTTGGCTCAAATTTGAGCAAGCT
TTGGGCAACTACGAAGCCACGAAAAGTAAGATTCAATCGACCTGCGCCATATTGTGA

Peptide Sequence

PEP ID

orange1.1t03262.5
PEP Infomation
Sequence

MANKISGQGTTRCTETPRPPGRSCITKILAEFADIPVSGVARHVSHSNAAIPIGLSPCLF
LLSVWLQFLISFSIPPHNNKLRTERDIHSHSHSPFPLSSDLRTYPTLLSIYAVVLSLYLH
AYAIRSDQEQFARMVVSFKYWDDCIEAEDLKEMWKEVEVSTEWIDAGEDRGQKVHLSRDP
DGQPYLTQTEMRAVAYIVVRRHFRSQIDPDMICAIAELESDRQLLAVRYDKKSKEAKVGL
MQITHKNAVWLFSEMGYRLYDVEQNPDLLFRPLVSIYFGAAYLKWLSTFQDKERTEEFVI
RAYKGGTKKATHKSTLPYWKSYISVKESLPSRKFFDDGPSPANASGAPPPVHAGASESSG
TEYWDSITTPEDMEQMWAHPDVVKEWTRSGEKRGKVRFSHDAKKRSYLSRVELKAVAEII
LSKYFSTKGVKPTYLCAIAEMVSMRFVNGVSPRIGLMGIDYSTAFWIYMELGYRAYKVDS
ADDLTKPFVSMYFGAAYLSYLSEYEGKERTPQFVVQAYLEGPKNVNLQETGPSWLKFEQA
LGNYEATKSKIQSTCAIL*

Transcript Sequence

Transcript ID

orange1.1t03262.5
Transcript Infomation

gene=orange1.1t03262 CDS=41-1717
Sequence

GTCAACAAGCAATATTTGACTTTGACCTAATAATCTAAAAATGGCAAACAAGATCAGTGG
TCAAGGAACAACGAGGTGCACAGAAACACCGAGACCGCCAGGCCGCAGCTGTATTACTAA
AATACTTGCCGAATTTGCAGACATACCTGTTTCAGGCGTGGCACGACACGTGTCACACTC
TAATGCAGCCATTCCAATTGGCCTCTCCCCTTGCCTTTTTCTCCTTTCTGTTTGGCTTCA
GTTTCTCATTTCATTTTCCATTCCCCCCCACAACAACAAACTGCGCACAGAGAGAGACAT
TCATTCCCATTCCCATTCCCCATTTCCTCTTTCCTCTGACCTACGTACGTACCCGACTCT
TCTCTCCATTTACGCCGTCGTTTTATCTTTATATTTGCATGCATATGCTATAAGAAGTGA
TCAAGAACAATTTGCAAGGATGGTGGTCAGCTTCAAGTATTGGGATGATTGTATTGAAGC
TGAGGATTTGAAGGAAATGTGGAAGGAAGTTGAAGTCAGCACGGAATGGATAGATGCTGG
AGAGGATAGAGGACAGAAAGTTCATCTCTCAAGGGATCCTGATGGACAGCCTTATTTGAC
ACAGACTGAGATGAGGGCTGTGGCTTATATTGTAGTCCGAAGACATTTTCGCTCGCAAAT
AGATCCAGACATGATTTGTGCTATTGCTGAACTTGAAAGTGACAGACAACTCCTTGCCGT
TCGGTATGACAAAAAGTCTAAGGAGGCTAAAGTAGGCCTCATGCAAATCACTCATAAGAA
TGCAGTGTGGCTGTTTAGTGAGATGGGTTACCGATTATATGATGTAGAGCAGAATCCAGA
CCTTCTATTCAGGCCTCTCGTTAGTATATATTTTGGAGCTGCTTACCTTAAATGGCTATC
AACCTTTCAGGACAAAGAAAGAACCGAAGAATTTGTTATTAGGGCCTATAAAGGTGGTAC
GAAAAAGGCAACTCACAAATCGACTTTGCCATATTGGAAGAGCTATATATCAGTGAAAGA
AAGCCTTCCATCAAGAAAATTCTTTGATGATGGTCCTTCGCCAGCTAATGCTTCTGGTGC
TCCTCCACCTGTACATGCAGGTGCTTCAGAAAGCTCAGGTACTGAGTATTGGGACTCTAT
AACGACTCCTGAAGACATGGAACAGATGTGGGCTCATCCTGATGTTGTTAAAGAGTGGAC
AAGATCTGGAGAAAAAAGGGGAAAAGTGCGATTTTCACATGATGCAAAGAAGAGATCCTA
TCTTTCCCGAGTAGAATTGAAGGCAGTAGCAGAAATCATTCTTTCAAAGTACTTCAGTAC
CAAGGGTGTTAAACCTACATATCTTTGTGCTATTGCTGAGATGGTTAGCATGCGTTTTGT
GAATGGTGTTTCACCGCGAATTGGCTTAATGGGAATCGATTACTCTACAGCTTTCTGGAT
TTACATGGAGTTGGGCTACAGAGCTTACAAAGTTGATTCTGCAGATGATCTAACTAAACC
ATTTGTGTCCATGTACTTTGGTGCTGCCTATTTGTCCTATCTATCAGAATATGAAGGGAA
GGAAAGAACTCCACAGTTTGTTGTTCAGGCATATCTCGAAGGGCCTAAGAATGTGAATCT
TCAAGAAACTGGTCCTTCTTGGCTCAAATTTGAGCAAGCTTTGGGCAACTACGAAGCCAC
GAAAAGTAAGATTCAATCGACCTGCGCCATATTGTGAGCTGTTGAAGTAGAATCTGCACA
GTTTTAATATGGATTTTTAGCTCAGCATTTCACAGGATTTATTACTATTACAAAAGGCTA
ATGAAATGTGTGAATGCATTCTTAACTAGAATGCGTGATGGTGTTTCTAGGCAACTTGGT
ATGAGTGATATTTTCAGATATCCAGCAGCAAAAAGAAATGTTTATTTTCTTTGAGTGTAT
TATTCCTTTTTTTTTTATTTTATTTTTTTCAGGGAAAGATTTTGGAATTCTACCTGAGTT
TTGGTGAGTTTAAATGGCATACTTGATAGCCGGAGAAAAAAATAAGATTTTGAGTTAAT