Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03257.1
CDS Infomation

gene=orange1.1t03257
Sequence

ATGGATCAATCAGATCAAACACAACAACAACAACAGCAACAGCAGCAGCCTGTGATGGGG
GTTGTAGCTGGTGCTGGTCAGATGTCATATCCTCCCTACCATACGGCTCCTTTGGTGGCT
TCTGGTACTCCTGCTGTGGCCGTCCCCTCCCCAACCCAGCCTCCATCTACTTTCGCCAGT
TCTCCGCACCAGCTTGCCTACCAACAAGCCCAGCACTTTCACCACCAACAGCAGCAGCAA
CAACAGCAGCAGCTTCAGATGTTCTGGTCCAATCAAATGCAAGAAATTGAGCAAACGGCC
GACTTCAAGAATCACAGCCTCCCACTTGCTAGGATCAAGAAAATTATGAAAGCTGATGAA
GATGTGAGAATGATTTCAGCAGAGGCCCCTGTCATATTTGCCAAGGCTTGTGAGATGTTT
ATTTTGGAACTAACTCTGCGGTCTTGGATCCACACAGAAGAGAATAAAAGGAGAACACTG
CAAAAGAATGATATAGCGGCTGCCATTTCAAGGACTGATGTTTTTGATTTCTTGGTGGAT
ATTATTCCTAGAGATGAGTTGAAAGAGGAGGGACTTGGGGTCACCAAGGGCGCTCTTCCA
GTGGTAGGTTCACCTGGTGATATGCCCTTATACTATGTCCCGCCACAGCACCCCGTGGGG
CATACAGGGATGATCATGGGAAAGCCAGTCGATCAAGCAGCACTTTATTCTGGCCAGCAG
CCTCGACCTCCTGTGGCTTTTATGCCATGGCCTCAGAGTCAGAGTCAAGCACAACAGCAG
CAGCAACCTCAACAACAGCAAAATGACCCTTGA

Peptide Sequence

PEP ID

orange1.1t03257.1
PEP Infomation
Sequence

MDQSDQTQQQQQQQQQPVMGVVAGAGQMSYPPYHTAPLVASGTPAVAVPSPTQPPSTFAS
SPHQLAYQQAQHFHHQQQQQQQQQLQMFWSNQMQEIEQTADFKNHSLPLARIKKIMKADE
DVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD
IIPRDELKEEGLGVTKGALPVVGSPGDMPLYYVPPQHPVGHTGMIMGKPVDQAALYSGQQ
PRPPVAFMPWPQSQSQAQQQQQPQQQQNDP*

Transcript Sequence

Transcript ID

orange1.1t03257.1
Transcript Infomation

gene=orange1.1t03257 CDS=904-1716
Sequence

CTACTTTCTCTCTCTTAGGGTTTCTGCTAACTCAATAAGCTCTTCTTGAAGATTCAGCTC
GAGCAATCAGTGGGGAGCTACATGTAAATAGCTCTTGGAAAACCTTTTTATCTTGAAAGA
TATATGTATAACTAAAACTGAGTGTAAATTAATCCACCAAGAAATAGGAGAAACAAAAGT
GATTGATATGGGGAGTTGCCAATCATCTTCTCTATGCTTTAGTGATAACTTATGGTGTAG
GTTTGGAATTAGACATTAGGATTCATCTGAGGAAAAAATATGTTAGTCTATCCAGCCTTA
CAAAAATGTAATTTGCTGGGAGAGTTAATACTTGTTAATAAAGGGATGGTTCATGATAAT
GGATGGATGGAAGAAGTTACCCAAATGAGTTATTGTGTTGAAAGAATGGATCAGCTGCAC
AAGGACTGACTCATAAAAAAGTTCTAGGAAAAGTCTGAGAATACCATACATTCTAATTGA
GGAGTTTCTCATTAAGATCCAGTCTTTAAATTTTTTTCACTACTTTTCTAAGATGAAAAA
AAAAGAACACAGTGCATTACAAATTGGGTGGTTAGTCCTTGTACCTACATAAGAGCTCCA
TGTTAATACCGTCTTATGAAAGAATGGTGGGTTTGGGGTCAGTCAAAAGTTTGTGGCTGG
TGCTTGTGAGACTGGCCTGGTATTAGTTAGAGTGTGTCGTCTCCTTCACTTTTGTTCATG
GTGGAGCTACTACTTTCATTCATGTTTGACCATAAAGAAGTTAGTTGCTCTTTACATTTG
TTAAAAATTATAGGGCCTAAGAAATCCAAGTTGACAACTTCTTTTGGCCAGAGTCTTGCA
TATCCGCAAAGAGTATTGTGATGAGAATATAGCTTGAAGAGGAAAAGTTTTAAAAAATTG
GGCATGGATCAATCAGATCAAACACAACAACAACAACAGCAACAGCAGCAGCCTGTGATG
GGGGTTGTAGCTGGTGCTGGTCAGATGTCATATCCTCCCTACCATACGGCTCCTTTGGTG
GCTTCTGGTACTCCTGCTGTGGCCGTCCCCTCCCCAACCCAGCCTCCATCTACTTTCGCC
AGTTCTCCGCACCAGCTTGCCTACCAACAAGCCCAGCACTTTCACCACCAACAGCAGCAG
CAACAACAGCAGCAGCTTCAGATGTTCTGGTCCAATCAAATGCAAGAAATTGAGCAAACG
GCCGACTTCAAGAATCACAGCCTCCCACTTGCTAGGATCAAGAAAATTATGAAAGCTGAT
GAAGATGTGAGAATGATTTCAGCAGAGGCCCCTGTCATATTTGCCAAGGCTTGTGAGATG
TTTATTTTGGAACTAACTCTGCGGTCTTGGATCCACACAGAAGAGAATAAAAGGAGAACA
CTGCAAAAGAATGATATAGCGGCTGCCATTTCAAGGACTGATGTTTTTGATTTCTTGGTG
GATATTATTCCTAGAGATGAGTTGAAAGAGGAGGGACTTGGGGTCACCAAGGGCGCTCTT
CCAGTGGTAGGTTCACCTGGTGATATGCCCTTATACTATGTCCCGCCACAGCACCCCGTG
GGGCATACAGGGATGATCATGGGAAAGCCAGTCGATCAAGCAGCACTTTATTCTGGCCAG
CAGCCTCGACCTCCTGTGGCTTTTATGCCATGGCCTCAGAGTCAGAGTCAAGCACAACAG
CAGCAGCAACCTCAACAACAGCAAAATGACCCTTGAATGACTTATCGAAGCTTTTGAACA
TTAACAATGGATCTGATCCGAGTAGTGTGTGTTTATCTATACTAATTAAGTGGTAGCTGT
AGTTTTAGTTTGGTAGTAGTTATTATCAGACACTCAAAGACAGTTTGTGGATTAAGTCAA
TTCCATTCTGTTGTGATAGGGTTAGCACTCAGGTGGATCATATTATCTGCTCTTCTTTTA
AACTAAAACTTTTGTATTATCTGCTCTTCTTTTAAATGAAGTGTCTCTCTCACAGGGTGG
GCTTTTTCTCTGACAGAAGAAAGGATAATGGCTTGCTTATTTGAACTTTGGAAAAGAAAC
T