Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03246.2
CDS Infomation

gene=orange1.1t03246
Sequence

ATGAGTTCAAAAGCTCGGAGGAAACAAAGATGGTGCACACAAACGCTTACTCCATTGATG
GAAGGTCCTGATCCTGAAATGCTAGAAGAAGGAAGCAAGAAGGAGAGCTCATGGGAAGTG
ATTCGAGAATGGTTCGGAATTCAAAAAGGAATTTCTTCGGGGACTAATCATAATAACTTT
TCCATGTCGTTAGAAGGTAGCAGTATTCCTGCTAAGAGGCAAGATTTAAGGCTTTTGCTA
GGTGTCTTAGGCTGCCCATTAGCTCCTATTCCTCTTGTTAACGACCCAATTCTGCGCATC
CATATCAAAGACATCCCCATTGAAACTTCGAGTGCACATTATATCATACAGCAATATTTG
GCGGCCACGGGTTGCTTGAAACAACAAAAGCGTGCAAAAAATATGTACGCAACAGGAACA
GTGAAGATGGTCTGTTGTGAGACGGAGATTTCTTCAGGAAAAAATGTGAAGAGCTTGGGG
ACTAGAAGTGGGGAAAGTGGGTGCTTTGTTCTTTGGCAAATGCTGCCGGGAATGTGGTCT
CTTGAGTTGGTAGTCGGCGGCAACAAGGTCATCGCCGGCAGCGATGGCAAGACTGTTTGG
CGACACACTCCTTGGCTCGGAACCCATGCAGCTAAAGGCCCTCAACGCCCTCTGCGTCGC
ATTATCCAGGGCCTAGATCCAAAGATCACAGCCAGCTTATTTGCAAAAGCACAATGCTTG
GGGGAGAAGAGAATAGGAGATGATGAATGCTTTGTTCTAAAAGTTGCAGCAGATCGAGCA
GCCGTTATGGAAAGAAGTGAGGGTCCAGCTGAAGTTATAAGGCATGTATTATACGGCTAC
TTTTGCCAAAAGAGTGGCCTATTGATATACTTAGAGGACTCACATCTCACCAGGGTACAG
ACTCCGGAAAATGACACTATTTATTGGGAAACAACTATAGGAAGTAGCATTGGTGACTAC
AGCGACGTCGACGGCGTGCTCATCGCACATCAAGGGCGGTCAATCGCCACCGTTTTCCGG
TTCGGAGAGCTGTCGATACAGCATAGCAGAACCAGGATGGAAGAGATGTGGAGGATTGAT
GACGTTGTGTTCAATGTGCCAGGCCTTTCCATGGACTATTTCATTCCTCCTGCTGATATC
ATCGATAATGAAAAATCCCCATGA

Peptide Sequence

PEP ID

orange1.1t03246.2
PEP Infomation
Sequence

MSSKARRKQRWCTQTLTPLMEGPDPEMLEEGSKKESSWEVIREWFGIQKGISSGTNHNNF
SMSLEGSSIPAKRQDLRLLLGVLGCPLAPIPLVNDPILRIHIKDIPIETSSAHYIIQQYL
AATGCLKQQKRAKNMYATGTVKMVCCETEISSGKNVKSLGTRSGESGCFVLWQMLPGMWS
LELVVGGNKVIAGSDGKTVWRHTPWLGTHAAKGPQRPLRRIIQGLDPKITASLFAKAQCL
GEKRIGDDECFVLKVAADRAAVMERSEGPAEVIRHVLYGYFCQKSGLLIYLEDSHLTRVQ
TPENDTIYWETTIGSSIGDYSDVDGVLIAHQGRSIATVFRFGELSIQHSRTRMEEMWRID
DVVFNVPGLSMDYFIPPADIIDNEKSP*

Transcript Sequence

Transcript ID

orange1.1t03246.2
Transcript Infomation

gene=orange1.1t03246 CDS=648-1811
Sequence

ACATAAGTCAGTAATTAAGTATTAATCAAGTACAAATATTAAAAAGAACATCCATGAAAT
GGGCAAAAATATATATGTCTTTAAAAATTCATGTGATGATCTTGTTCTCGTGTTATATCA
AGAAATGATTTTTTTCATGGTAATAAACAGTAAAACATAAGTGCGTTTCTTATCGTTATA
ATCAATTTGCAAAAAGAATAATACGATTTATAATGTGGAACACATGTTATCGTTTTCCGA
AAAAGATTAACCCAAATGGAGGAGATTAGGGAGACTAGCAGCTAGCTACAGGATTATGGA
AAGAGATGTTGGCCAATTCTAATGGGACCTCTCACTTGGAGTAGGAGTAGGCGAGTAGCT
CAGGAGAATAGACTTAACAGACTTAAAAAATAAGACGACAAGTGAGATGAGTCTAAAAAG
AAAAAGAAGAAGAATAAAGCAAAGCTATATCGACAGCCCAACATGCGAGTCTGTAAAATA
ATAATAATGCTAATCTATCCCTCTCTGCAGGTTGGACAGATGGCCTGTCGCTTTTAAAAT
ATTTTGTCCCTCTTCCTCTCTTTAAAGCAAAATCTTACTCTATCTTCATTCATATATCCA
ACTTCTCTTCTTCTTCTTTGACCATCTCTTGATAACTTTTATTGATAATGAGTTCAAAAG
CTCGGAGGAAACAAAGATGGTGCACACAAACGCTTACTCCATTGATGGAAGGTCCTGATC
CTGAAATGCTAGAAGAAGGAAGCAAGAAGGAGAGCTCATGGGAAGTGATTCGAGAATGGT
TCGGAATTCAAAAAGGAATTTCTTCGGGGACTAATCATAATAACTTTTCCATGTCGTTAG
AAGGTAGCAGTATTCCTGCTAAGAGGCAAGATTTAAGGCTTTTGCTAGGTGTCTTAGGCT
GCCCATTAGCTCCTATTCCTCTTGTTAACGACCCAATTCTGCGCATCCATATCAAAGACA
TCCCCATTGAAACTTCGAGTGCACATTATATCATACAGCAATATTTGGCGGCCACGGGTT
GCTTGAAACAACAAAAGCGTGCAAAAAATATGTACGCAACAGGAACAGTGAAGATGGTCT
GTTGTGAGACGGAGATTTCTTCAGGAAAAAATGTGAAGAGCTTGGGGACTAGAAGTGGGG
AAAGTGGGTGCTTTGTTCTTTGGCAAATGCTGCCGGGAATGTGGTCTCTTGAGTTGGTAG
TCGGCGGCAACAAGGTCATCGCCGGCAGCGATGGCAAGACTGTTTGGCGACACACTCCTT
GGCTCGGAACCCATGCAGCTAAAGGCCCTCAACGCCCTCTGCGTCGCATTATCCAGGGCC
TAGATCCAAAGATCACAGCCAGCTTATTTGCAAAAGCACAATGCTTGGGGGAGAAGAGAA
TAGGAGATGATGAATGCTTTGTTCTAAAAGTTGCAGCAGATCGAGCAGCCGTTATGGAAA
GAAGTGAGGGTCCAGCTGAAGTTATAAGGCATGTATTATACGGCTACTTTTGCCAAAAGA
GTGGCCTATTGATATACTTAGAGGACTCACATCTCACCAGGGTACAGACTCCGGAAAATG
ACACTATTTATTGGGAAACAACTATAGGAAGTAGCATTGGTGACTACAGCGACGTCGACG
GCGTGCTCATCGCACATCAAGGGCGGTCAATCGCCACCGTTTTCCGGTTCGGAGAGCTGT
CGATACAGCATAGCAGAACCAGGATGGAAGAGATGTGGAGGATTGATGACGTTGTGTTCA
ATGTGCCAGGCCTTTCCATGGACTATTTCATTCCTCCTGCTGATATCATCGATAATGAAA
AATCCCCATGATGTTAATTACTAACATTAACTTGCTTCTTTTTCTTTTTTAATTTTAAAT
GTTTTGGTTATAATTTGGAAATATTGGTGGGTTTATGGTGTATT