Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03244.1
CDS Infomation

gene=orange1.1t03244
Sequence

ATGAGTGATTCAACACCAATTCTCACTCAATCCGACTTAGAAAGCCGTCCATCCCTCGGT
GAGACGATTGAGCGGTGCATCGGAGATTTCAGCTCAGCCCAGCTCGTACAAGCCTTCCTT
GTATCAATTGCTTGGTTTTTTGATGCACAACAAACATTCATAAGTGTCTTCACCGACGCT
GAGCCAACATGGCATTGCACTGATGATTCATGTAACGGTGTCTCCAACTTGTGTCAACTT
CCCAAGAACTCATGGTCTTGGGATTTGCAAGCACACACATCAATCATCTCAGAATGGGAT
CTCGAGTGTGCAAGTTCACTCATCAAAGGGCTGCCGGCTTCTTCTTTCTTCATGGGTTGC
CTGGCTGGTGGGCTTATTCTTGCCACACTTGCTGACTCGTCTCTCGGCCGCAAAAACATG
CTCTTTCTCTCATGTTTGATGATGTCTGTCTCTTGCCTTCTTACCATCTTCTCAACCAAT
ATGTGGATATACTCTGTCTTGAGATTCATCAATGGCTTTGGTCGCGCAACGATTGGAACA
TGTGCAATTGTGTTATCAACAGAGCTCGTTGGTAAAAAACGGCGAGGCCAGGTAGGATCC
ATTGGTTTCTTTTGTTTCACTCTAGGGTTTCTATCGTTACCAGCCATAGCTTATATTAAC
AGAGGTTCTTCTTGGAGAAGAATTTATTTGTACACATCAATACCAACAATCTTGTATTGC
ATACTTGTTCGATTCTTAGTTCGTGAGTCTCCAAGATGGCTTTTCATTCAAGGACGTAAA
GAGGAAGCTGTGTCCATAATCAAAAGCATCTCAACATCAGAGAACCAAAGAAGCTTAATC
ATGGACTTCAACAACGTGTCATTCGAGCAAGAGACATGGAATGTAGATCTTTACTCAGCA
ATCAAGATTCTTGTGGAGAAAAAGTGGGCTCTTCGAAGATTATCAGCGATAATGGTGACT
GGTTTTGGCATTGGAATGGTGTACTATGGCATGCCATTAGGCCTTGGAAGTTTATCATTC
AATCTCTACTTGAGTGTGACGTTCAATGCCTTATCTGAGCTACCGGCATCACTAATTACT
TTCTTTCTCATAGGGAAACTGAAAAGAAAAAGTTCGTTACTAGGTTTCACTATCATGAGT
GGGGTTTGTAGTGTACTGTGTGTTGTGATGGGAAAGATATGGACGAGTGTTGAGATTGGA
TTAGAGCTAGTGGCTTTCTTTAGCGCATGTACTGCATTTAGCTTGTTGCTTATATACACA
CTAGAGTTGTTCCCAACATGCGTGAGAAACTCAGCTATCTCAATGGTGAGGCAAGCTCTT
GTATTCGGCGGCGTTTTCAGTCCGGTGCTTGTTGCCGCCGGGAGACAAAATAATTTCTTA
TCGTATGGGATATTTGGATTGGTGATAGGGCTTTGTGGGTTGTTTGTGATTGGCTTACCA
GAGACAAGAGATACCCAACTTTCGGATACAATGGATGAAGAAGAATACAAAGAGAGAGCA
GCTGCAGCTGGCTTCAATCGCTTAGTTTAA

Peptide Sequence

PEP ID

orange1.1t03244.1
PEP Infomation
Sequence

MSDSTPILTQSDLESRPSLGETIERCIGDFSSAQLVQAFLVSIAWFFDAQQTFISVFTDA
EPTWHCTDDSCNGVSNLCQLPKNSWSWDLQAHTSIISEWDLECASSLIKGLPASSFFMGC
LAGGLILATLADSSLGRKNMLFLSCLMMSVSCLLTIFSTNMWIYSVLRFINGFGRATIGT
CAIVLSTELVGKKRRGQVGSIGFFCFTLGFLSLPAIAYINRGSSWRRIYLYTSIPTILYC
ILVRFLVRESPRWLFIQGRKEEAVSIIKSISTSENQRSLIMDFNNVSFEQETWNVDLYSA
IKILVEKKWALRRLSAIMVTGFGIGMVYYGMPLGLGSLSFNLYLSVTFNALSELPASLIT
FFLIGKLKRKSSLLGFTIMSGVCSVLCVVMGKIWTSVEIGLELVAFFSACTAFSLLLIYT
LELFPTCVRNSAISMVRQALVFGGVFSPVLVAAGRQNNFLSYGIFGLVIGLCGLFVIGLP
ETRDTQLSDTMDEEEYKERAAAAGFNRLV*

Transcript Sequence

Transcript ID

orange1.1t03244.1
Transcript Infomation

gene=orange1.1t03244 CDS=193-1722
Sequence

TACCTTTAGCAAATTGCTACCATAAGCCAAAATATTTTTTTCCTTTTGCCAACTTGAATC
CATATCACTGCTAGTTCTTATCGGCGGCTAGCCATTTATAAAAATAGATCAATTCAGAGA
AGAGACCAATAACTAGAAATATTAGTTACGTTCTTCAATAACTTGATCGAGATTATAATA
AGCTAGCTGCAAATGAGTGATTCAACACCAATTCTCACTCAATCCGACTTAGAAAGCCGT
CCATCCCTCGGTGAGACGATTGAGCGGTGCATCGGAGATTTCAGCTCAGCCCAGCTCGTA
CAAGCCTTCCTTGTATCAATTGCTTGGTTTTTTGATGCACAACAAACATTCATAAGTGTC
TTCACCGACGCTGAGCCAACATGGCATTGCACTGATGATTCATGTAACGGTGTCTCCAAC
TTGTGTCAACTTCCCAAGAACTCATGGTCTTGGGATTTGCAAGCACACACATCAATCATC
TCAGAATGGGATCTCGAGTGTGCAAGTTCACTCATCAAAGGGCTGCCGGCTTCTTCTTTC
TTCATGGGTTGCCTGGCTGGTGGGCTTATTCTTGCCACACTTGCTGACTCGTCTCTCGGC
CGCAAAAACATGCTCTTTCTCTCATGTTTGATGATGTCTGTCTCTTGCCTTCTTACCATC
TTCTCAACCAATATGTGGATATACTCTGTCTTGAGATTCATCAATGGCTTTGGTCGCGCA
ACGATTGGAACATGTGCAATTGTGTTATCAACAGAGCTCGTTGGTAAAAAACGGCGAGGC
CAGGTAGGATCCATTGGTTTCTTTTGTTTCACTCTAGGGTTTCTATCGTTACCAGCCATA
GCTTATATTAACAGAGGTTCTTCTTGGAGAAGAATTTATTTGTACACATCAATACCAACA
ATCTTGTATTGCATACTTGTTCGATTCTTAGTTCGTGAGTCTCCAAGATGGCTTTTCATT
CAAGGACGTAAAGAGGAAGCTGTGTCCATAATCAAAAGCATCTCAACATCAGAGAACCAA
AGAAGCTTAATCATGGACTTCAACAACGTGTCATTCGAGCAAGAGACATGGAATGTAGAT
CTTTACTCAGCAATCAAGATTCTTGTGGAGAAAAAGTGGGCTCTTCGAAGATTATCAGCG
ATAATGGTGACTGGTTTTGGCATTGGAATGGTGTACTATGGCATGCCATTAGGCCTTGGA
AGTTTATCATTCAATCTCTACTTGAGTGTGACGTTCAATGCCTTATCTGAGCTACCGGCA
TCACTAATTACTTTCTTTCTCATAGGGAAACTGAAAAGAAAAAGTTCGTTACTAGGTTTC
ACTATCATGAGTGGGGTTTGTAGTGTACTGTGTGTTGTGATGGGAAAGATATGGACGAGT
GTTGAGATTGGATTAGAGCTAGTGGCTTTCTTTAGCGCATGTACTGCATTTAGCTTGTTG
CTTATATACACACTAGAGTTGTTCCCAACATGCGTGAGAAACTCAGCTATCTCAATGGTG
AGGCAAGCTCTTGTATTCGGCGGCGTTTTCAGTCCGGTGCTTGTTGCCGCCGGGAGACAA
AATAATTTCTTATCGTATGGGATATTTGGATTGGTGATAGGGCTTTGTGGGTTGTTTGTG
ATTGGCTTACCAGAGACAAGAGATACCCAACTTTCGGATACAATGGATGAAGAAGAATAC
AAAGAGAGAGCAGCTGCAGCTGGCTTCAATCGCTTAGTTTAATTTATTCGCTACATACCC
AACAAGTGCATGCATGTACATTGAAGATGTAATCTACTAAAAGCAACAAGCTGGATTGAC
ATAAGTTATTGGTGGAGAGCAATCACAGCTTTCCCAGTGAGAGCAGGACATGTGAGATAT
ATGTGACTTGATCAAAACCGCTTTCATACTTTTTTTTTTTCTATTTTCTACTTATGATTA
ATTATTTTGATTTGCAATATGTTTGCATTCTTGCTAGTTGCTGTTGATTGTCTTATTTAG
AGAGA