Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03237.2
CDS Infomation

gene=orange1.1t03237
Sequence

ATGACGAAAAAAGCGGTGTTAATAGGCATAAACTACCCGGGAACGAAAGCGGAGCTGAAG
GGGTGCGTTAACGACGTTAAACGGATGTATGCATGTTTGGTGGATCGTTACGGATTCTCG
GAGGAGAACATAACGGTGTTGATCGATACGGATGATAGGTCTACCCAGCCGACTGGGCGG
AATATTAGGAGGGCTTTGGGCAATTTGGTGCGATCGGCTGAGCCCGGTGACGTGCTGTTT
GTTCACTACAGCGGGCATGGGACCAGGCTTCCTGCTGAGACTGGGGAGGACGACGATACT
GGTTATGATGAGTGCATTGTTCCTTCTGATATGAATCTTATTACTGATGATGATTTCAGG
GAGTTTGTAGACCAAATCCCACCAGGTTGTGAGATAACAGTTGTATCTGATTCTTGCCAT
AGTGGTGGCCTTATTGATGAGGCTAAGGAACAGATTGGGGAGAGCACAAGGCGTGATGAA
GAGGAAGAATCTGGTTCTGGTTTTAACTTCAAAAGCTTCTTGCACAAGAAAGTGGAAAAT
GCATTTGAATCTCGTGGAATTCACATTCCTTCTGGGCTGCGCCATCACCGCCCTAGTGGT
GATGAAGATGTTGAAGATCGTGAAGTTGAAGCCGGATATGGTGAGGGAGGTTATCATAAG
AACAAGTCCCTACCCCTCTCAACACTTATTGAAATACTCAAGCAGCAAACTGGTAAAGAT
GACATTGACGTCGGGAAGATAAGGCCAACCCTTTTTGATATGTTTGGGGAAGATGCGACC
CCAAAAGTGAAGAAGTTCATGAAGGTCCTTCTTAACAAACTTAAGCAAGGGGATGGTGAA
AGTGGGGGTGGTGGGTTTTTGGGCATGGTAGGTAGTCTCGCTCAAGAATTTCTAAAGCAT
AAGCTGGAAGAGAGTGATGAGAGTTATGCAAAACCTGCCTTGGAGACTGAAGTGGGCAGC
AAGAAGGATGTTTATGCTGGAGGAAGCAAGCGCTCACTTCCTGATGGTGGGATTTTGGTC
AGTGGATGTCAGACTGACCAAACTTCTGCTGATGCCAGCCCTTCTGGGAAGGCTAGCGAA
GCTTACGGAGCTCTCAGCAATGCAATTCAGATAATTATTGCTGAATCAGATGGTGCAGTG
ACTAACCGGGAGCTTGTTTTGTCCACTAGGCAGATGTTGAAGAAGCAGGGATTCACTCAG
CAACCTGGCCTTTATTGCCATGATAATCATGTTGATAAGCCGTTTATCTGCTGA

Peptide Sequence

PEP ID

orange1.1t03237.2
PEP Infomation
Sequence

MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGR
NIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFR
EFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFNFKSFLHKKVEN
AFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQQTGKD
DIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEFLKH
KLEESDESYAKPALETEVGSKKDVYAGGSKRSLPDGGILVSGCQTDQTSADASPSGKASE
AYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDKPFIC*

Transcript Sequence

Transcript ID

orange1.1t03237.2
Transcript Infomation

gene=orange1.1t03237 CDS=186-1439
Sequence

TCATAAAAAAAAACAGTTTCCTGACAGATAATTAATTACTAAATAAATCAAATTTTCATC
ATCCTCCTTTTTATAAACTTCGCCTTTTCAACGACCAGCCATTCAAGTAGATCAGATCAA
ATCCAACACTCGAGATCCAAAAGAAAGAAACGTTTCTTTTGAGATTATCAGAAGAGGAAA
ACAAAATGACGAAAAAAGCGGTGTTAATAGGCATAAACTACCCGGGAACGAAAGCGGAGC
TGAAGGGGTGCGTTAACGACGTTAAACGGATGTATGCATGTTTGGTGGATCGTTACGGAT
TCTCGGAGGAGAACATAACGGTGTTGATCGATACGGATGATAGGTCTACCCAGCCGACTG
GGCGGAATATTAGGAGGGCTTTGGGCAATTTGGTGCGATCGGCTGAGCCCGGTGACGTGC
TGTTTGTTCACTACAGCGGGCATGGGACCAGGCTTCCTGCTGAGACTGGGGAGGACGACG
ATACTGGTTATGATGAGTGCATTGTTCCTTCTGATATGAATCTTATTACTGATGATGATT
TCAGGGAGTTTGTAGACCAAATCCCACCAGGTTGTGAGATAACAGTTGTATCTGATTCTT
GCCATAGTGGTGGCCTTATTGATGAGGCTAAGGAACAGATTGGGGAGAGCACAAGGCGTG
ATGAAGAGGAAGAATCTGGTTCTGGTTTTAACTTCAAAAGCTTCTTGCACAAGAAAGTGG
AAAATGCATTTGAATCTCGTGGAATTCACATTCCTTCTGGGCTGCGCCATCACCGCCCTA
GTGGTGATGAAGATGTTGAAGATCGTGAAGTTGAAGCCGGATATGGTGAGGGAGGTTATC
ATAAGAACAAGTCCCTACCCCTCTCAACACTTATTGAAATACTCAAGCAGCAAACTGGTA
AAGATGACATTGACGTCGGGAAGATAAGGCCAACCCTTTTTGATATGTTTGGGGAAGATG
CGACCCCAAAAGTGAAGAAGTTCATGAAGGTCCTTCTTAACAAACTTAAGCAAGGGGATG
GTGAAAGTGGGGGTGGTGGGTTTTTGGGCATGGTAGGTAGTCTCGCTCAAGAATTTCTAA
AGCATAAGCTGGAAGAGAGTGATGAGAGTTATGCAAAACCTGCCTTGGAGACTGAAGTGG
GCAGCAAGAAGGATGTTTATGCTGGAGGAAGCAAGCGCTCACTTCCTGATGGTGGGATTT
TGGTCAGTGGATGTCAGACTGACCAAACTTCTGCTGATGCCAGCCCTTCTGGGAAGGCTA
GCGAAGCTTACGGAGCTCTCAGCAATGCAATTCAGATAATTATTGCTGAATCAGATGGTG
CAGTGACTAACCGGGAGCTTGTTTTGTCCACTAGGCAGATGTTGAAGAAGCAGGGATTCA
CTCAGCAACCTGGCCTTTATTGCCATGATAATCATGTTGATAAGCCGTTTATCTGCTGAT
ACGAGCGGGTGCTTTTGGGGTTCAGGAGATCGAATAATTTAAACAGTTTGCAGGGTTTGT
TGTGCTCTTTATGGATATGGTTTGAGTTTCATGTAGAATAAAATCTTAAACAACAGCTTG
CTTGTTTAAGTCTTCACATCTTTTGCCTCGGTCTTTGTCGAATTAATCTTGGTCCTTGAA
TGAAAGTTTTTAAACGTGTTTTTTAATCTTTGAGATAATAAGGCCGTTTGCTCATAATTC
CGGCCAAAAAACTTGTATTTCAGCTATTACTCAAGTAAGAATTTGTTGGAGACATACAAA
GATAAGCTCAAGAAGAACTAAGAACTATTAACTAATACAAGACTGGTAACCTATTATTTG
TCATTGGCCTTCATGACTGTGTTAGTAATTTACAAAATTATAAGCCAAAAAATAGAGCAT
TGAGTAGAAAAAATCAATATGAATGAGACTGCACAATTCCATATAAGTTTCTTCTTCCTC
AAGGGCAAGGCCTGTGCTGGTTTCTTAATTTTACGGCAGTTACATGGCTGTTACATGCAA
AAATACCAGAACTGCATCTCAATCATCGATATCTTGAACCCATGCCAAATCTGCGACCAA
TGCTTTCAAGTGAGGTCTTTTTATTTTTTCTATCACTGGTATACCATCAATGTAAAATTT
CCACATCTGATTCTAATATAGTTTTGGTGTGTGTATGTCAGAGAGAGAGAGAGAGAGATA
AACCTTGTAGCACTGTCTCAACTGCTGCATTTGGGACCAAAAGCCCAACAATTCGCTTAT
TATCTGCAGTGGTTTCTAGACGGACAACCCGGAGCCGTTTATGGCTTTGGCGAGCCTGTA
GAATTCCGTTTACATTACATCAATGTTGAAAAGGTTTCACAGCAAAGCTATGCAGTCTA