Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03234.1
CDS Infomation

gene=orange1.1t03234
Sequence

ATGTGTAGCTCCAAGGACAAGGTGACCACAGGCATGAATGAAGCAACCCCAACGATGGTT
GCCAAAATCAATGGCAGGCCGGTTCTTCAACCTACTTGTAACCGTGTTCCTAGCAAGCTA
GACCGCCGTAATACCCTCAACAAAGCACCACCACCACCACCAACATTACCATTGCCAACT
TCTATTAAACCTAACAAGCCAGCGGCTCCATTAGTATTAACGTGTCCTGCAGAGTCTAAG
TCACCAAGGCCTCAAGCTATTAAGCGAGGCAATGATTTAAATTCGAGTTCCGAAAAGGTT
GTTACTCCAAGAAGTAACATCAGAACTTTAGAGAGAAAGAAGTCTAAAAGTTTCAAAGAA
GGTGGAAATGTAGAGAGAACAGCAGCATTAATGATGAGTACTAATACTAGTACCTATTCA
TCGTCTCTGATCATGGACTCGCCGGGAAGCATAGCCGCCGTGAGGAGGGAACAAATGGCG
CTTCAACATGCACAACGCAAAATGCGGATTGCTCATTATGGAAGATCAAAGTCTGCTAAG
TTTGAATCCAAAGTTGTTCCTTTATTTGATCCTAACAATAATAATGCGGCACGCAGCACG
CCCACAACTGGTGAGCAGCAGGAAGAGAAGAGGTGCAGCTTTATTACTGCTTATTCAGAT
CCCATTTTCGTAGCTTATCATGATGAAGAATGGGGAGTTCCAGTCCGTAATGATAATATG
TTGTTTGAATTGCTAGTTCTGAGTGGTGCTCAAGTTGGCTCAGACTGGACTTCAATCTTG
AAAAAAAGACAAGGTTTCAGGGATGCATTTTCAGGTTTTGAAGCCGAAACTGTGGCCAAA
CTAAGTGACAAGCAAATGATGTCAATAAGTACAGAGTATAGCATAGATATGAGCCGAGTT
CGAGGTGTTGTCGACAACTCTAACCGAATTCTTGAGGTTAAAAGAGTGTTTGGATCATTT
GAGAAATACATCTGGGGATTTGTTAACCACAAGCCAATCTCTACACAATACAAATTTGGG
CACAAAATCCCCGTTAAGACATCAAAATCAGAAAGCATAAGCAAGGACATGGTTAGGAGA
GGATTTAGGTTCGTGGGTCCGACGGTGGTCCATTCATTCATGCAAGCCGCCGGCCTAACT
AACGATCACTTGATCATCTGCCACCGCCACCTCCCATGCACCTTATTGGCCGCGGCACCA
TACAAACGCCCCAATAATGATCAAGAACCAACAACACCAACAACAGCAACACCTACTCTT
TAG

Peptide Sequence

PEP ID

orange1.1t03234.1
PEP Infomation
Sequence

MCSSKDKVTTGMNEATPTMVAKINGRPVLQPTCNRVPSKLDRRNTLNKAPPPPPTLPLPT
SIKPNKPAAPLVLTCPAESKSPRPQAIKRGNDLNSSSEKVVTPRSNIRTLERKKSKSFKE
GGNVERTAALMMSTNTSTYSSSLIMDSPGSIAAVRREQMALQHAQRKMRIAHYGRSKSAK
FESKVVPLFDPNNNNAARSTPTTGEQQEEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNM
LFELLVLSGAQVGSDWTSILKKRQGFRDAFSGFEAETVAKLSDKQMMSISTEYSIDMSRV
RGVVDNSNRILEVKRVFGSFEKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRR
GFRFVGPTVVHSFMQAAGLTNDHLIICHRHLPCTLLAAAPYKRPNNDQEPTTPTTATPTL
*

Transcript Sequence

Transcript ID

orange1.1t03234.1
Transcript Infomation

gene=orange1.1t03234 CDS=177-1439
Sequence

TCTCTTAGCTAGCAAGCTCTTTCATAACCTTCTCTTTCAATTAATATTTCATCTTTTGAG
CCTTTGAGAGCCTTTTTTTTTTTTTTTTTTAATTCCTCCAAACCCATAGCTAATTAATAA
CCCAGCTAGCTGTTCTCCTAAAACATACATCATATATATATATATACACGTATAAAATGT
GTAGCTCCAAGGACAAGGTGACCACAGGCATGAATGAAGCAACCCCAACGATGGTTGCCA
AAATCAATGGCAGGCCGGTTCTTCAACCTACTTGTAACCGTGTTCCTAGCAAGCTAGACC
GCCGTAATACCCTCAACAAAGCACCACCACCACCACCAACATTACCATTGCCAACTTCTA
TTAAACCTAACAAGCCAGCGGCTCCATTAGTATTAACGTGTCCTGCAGAGTCTAAGTCAC
CAAGGCCTCAAGCTATTAAGCGAGGCAATGATTTAAATTCGAGTTCCGAAAAGGTTGTTA
CTCCAAGAAGTAACATCAGAACTTTAGAGAGAAAGAAGTCTAAAAGTTTCAAAGAAGGTG
GAAATGTAGAGAGAACAGCAGCATTAATGATGAGTACTAATACTAGTACCTATTCATCGT
CTCTGATCATGGACTCGCCGGGAAGCATAGCCGCCGTGAGGAGGGAACAAATGGCGCTTC
AACATGCACAACGCAAAATGCGGATTGCTCATTATGGAAGATCAAAGTCTGCTAAGTTTG
AATCCAAAGTTGTTCCTTTATTTGATCCTAACAATAATAATGCGGCACGCAGCACGCCCA
CAACTGGTGAGCAGCAGGAAGAGAAGAGGTGCAGCTTTATTACTGCTTATTCAGATCCCA
TTTTCGTAGCTTATCATGATGAAGAATGGGGAGTTCCAGTCCGTAATGATAATATGTTGT
TTGAATTGCTAGTTCTGAGTGGTGCTCAAGTTGGCTCAGACTGGACTTCAATCTTGAAAA
AAAGACAAGGTTTCAGGGATGCATTTTCAGGTTTTGAAGCCGAAACTGTGGCCAAACTAA
GTGACAAGCAAATGATGTCAATAAGTACAGAGTATAGCATAGATATGAGCCGAGTTCGAG
GTGTTGTCGACAACTCTAACCGAATTCTTGAGGTTAAAAGAGTGTTTGGATCATTTGAGA
AATACATCTGGGGATTTGTTAACCACAAGCCAATCTCTACACAATACAAATTTGGGCACA
AAATCCCCGTTAAGACATCAAAATCAGAAAGCATAAGCAAGGACATGGTTAGGAGAGGAT
TTAGGTTCGTGGGTCCGACGGTGGTCCATTCATTCATGCAAGCCGCCGGCCTAACTAACG
ATCACTTGATCATCTGCCACCGCCACCTCCCATGCACCTTATTGGCCGCGGCACCATACA
AACGCCCCAATAATGATCAAGAACCAACAACACCAACAACAGCAACACCTACTCTTTAGA
ATATCATCGATCAAATTAACATCATACAAATATGCATAAGCTGCCCATAAGTACTATGCT
AATTACAATTTACTTTTGAGTGTTTATTATGATTAACTTGTGTACATTATAGGAATATAT
AGGAAATTAAACAAGTACCAAAGCTTTGTGACTATTGTGATAGACTATAGTTATTTGAAT
GAGTGATCAGTGAGTGAGTGTTTAATTATTAGTTTGAGCTAATGAATAGTGGGGGAGACA
GAGAGCATGTGCAAAGGAGAGGCAACGCCTCGTGTGGGGGATCCAAGTAGTACTGCCATT
TGATTTCCCATTTGCTTGCAATTGCTAGGTAGCTGGCTATATTAGCTAACCTTTTTTTTT
TTTTTTTTTGAATTTGGCTTTTGGTGGGGAATACGATTATTATTATTATAAACCCAGCTA
AGCCAACAATGTTGTATCTTGGATTTGGCGTTTGTTATTTTGAGTGAAGGTTTGATATGT
GAATTAATTTGTCATGTGCAATTTGACCTGCTGCAGTTTTATCTT