Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03178.1
CDS Infomation

gene=orange1.1t03178
Sequence

ATGGCTGCTGTCGCGTTTCACAGTACAGAGCTACTGATAATCTTCCTCGCCGTTAGTTCT
TTCGTCGTTAACTGCTGCCCGCCGTCAGACCGGGCAGCACTTTTAGCCTTCAAATCTGCC
CTCCACGAGCCGTACATAGGCATCTTTAATTCTTGGACGGGTAACGACTGTTGCCACAAC
TGGTACGGCGTTAGTTGCGACCCGGAAACACACCAGGTCGCTGAGATCACCCTACGCGGC
AAGTCCGAGGACCCGATATTCCAACGGGCCCACAGAACCGGGTACATGACCGGGTTTATC
TCGCCCGCTGTGTGTAAACTCCCGCACCTCTCCAGCTTAACACTCACCGACTGGGAAGGC
ATCTCCGGCGAAATCCCACGCTGCAGTACTTTACTCCCCTTTCTCCGTATTCTTGATTTA
ACCGGAAACAAGATATCGGGCGAGATTCCCCGACATATCGGGAAGCTTCACAGACTTTCT
GTGTTAAATATCGCCGATAACTACGTATCGGGTCCGATACCTGGTTCCATTGGTAATCTT
TCTAGCTTGATGCATCTAGATGTACGCAACAATAGAATTTCGGGGCCGATCCCGGGTTGT
TTCGGGCGACTCCATATGTTGAGCCGGGCTTTGCTGTCTGGGAATCAGATTTCGGGGACG
ATCCCAAGTTCCATTTCTAGAGTTTATCGTCTGACCGATTTGGACTTGTCGACCAACCAA
ATATCGGGGCCGATACCAGCTTCGTTAGGTAAAATGCCAGATTTGTCAACGCTAAATCTT
GATTTTAACCGATTTTCGGGCGTCATACCAGCGAGTTTATTGACTTCTGGGGTCAATAAT
CTAAATCTCAGTAAAAACTCGCTTGAAGGGAAAATACCGGACGCTTTCGGGCCAAAATCT
TATTTTATGGTGCTTGATTTATCGTACAACAAATTGAGCGGGCCGATTCCGAGAACTTTG
TCCGGCACATCGTATATCGGGTATTTAGATTTGAGTCATAATAATCTCTGTGGGAAGATT
CCGGCCGGTTCGCCGTTCGATCACCTTGATGCATCGTCTTTTGAGAGCAATAAATGTTTA
TGTGGGAAGCCGTTGCTTAATGCTTGTTAG

Peptide Sequence

PEP ID

orange1.1t03178.1
PEP Infomation
Sequence

MAAVAFHSTELLIIFLAVSSFVVNCCPPSDRAALLAFKSALHEPYIGIFNSWTGNDCCHN
WYGVSCDPETHQVAEITLRGKSEDPIFQRAHRTGYMTGFISPAVCKLPHLSSLTLTDWEG
ISGEIPRCSTLLPFLRILDLTGNKISGEIPRHIGKLHRLSVLNIADNYVSGPIPGSIGNL
SSLMHLDVRNNRISGPIPGCFGRLHMLSRALLSGNQISGTIPSSISRVYRLTDLDLSTNQ
ISGPIPASLGKMPDLSTLNLDFNRFSGVIPASLLTSGVNNLNLSKNSLEGKIPDAFGPKS
YFMVLDLSYNKLSGPIPRTLSGTSYIGYLDLSHNNLCGKIPAGSPFDHLDASSFESNKCL
CGKPLLNAC*

Transcript Sequence

Transcript ID

orange1.1t03178.1
Transcript Infomation

gene=orange1.1t03178 CDS=52-1161
Sequence

CCTCACTCCCCAACGTAACAAAACTCACCGTTTTGGATCAAACCAAGCAACATGGCTGCT
GTCGCGTTTCACAGTACAGAGCTACTGATAATCTTCCTCGCCGTTAGTTCTTTCGTCGTT
AACTGCTGCCCGCCGTCAGACCGGGCAGCACTTTTAGCCTTCAAATCTGCCCTCCACGAG
CCGTACATAGGCATCTTTAATTCTTGGACGGGTAACGACTGTTGCCACAACTGGTACGGC
GTTAGTTGCGACCCGGAAACACACCAGGTCGCTGAGATCACCCTACGCGGCAAGTCCGAG
GACCCGATATTCCAACGGGCCCACAGAACCGGGTACATGACCGGGTTTATCTCGCCCGCT
GTGTGTAAACTCCCGCACCTCTCCAGCTTAACACTCACCGACTGGGAAGGCATCTCCGGC
GAAATCCCACGCTGCAGTACTTTACTCCCCTTTCTCCGTATTCTTGATTTAACCGGAAAC
AAGATATCGGGCGAGATTCCCCGACATATCGGGAAGCTTCACAGACTTTCTGTGTTAAAT
ATCGCCGATAACTACGTATCGGGTCCGATACCTGGTTCCATTGGTAATCTTTCTAGCTTG
ATGCATCTAGATGTACGCAACAATAGAATTTCGGGGCCGATCCCGGGTTGTTTCGGGCGA
CTCCATATGTTGAGCCGGGCTTTGCTGTCTGGGAATCAGATTTCGGGGACGATCCCAAGT
TCCATTTCTAGAGTTTATCGTCTGACCGATTTGGACTTGTCGACCAACCAAATATCGGGG
CCGATACCAGCTTCGTTAGGTAAAATGCCAGATTTGTCAACGCTAAATCTTGATTTTAAC
CGATTTTCGGGCGTCATACCAGCGAGTTTATTGACTTCTGGGGTCAATAATCTAAATCTC
AGTAAAAACTCGCTTGAAGGGAAAATACCGGACGCTTTCGGGCCAAAATCTTATTTTATG
GTGCTTGATTTATCGTACAACAAATTGAGCGGGCCGATTCCGAGAACTTTGTCCGGCACA
TCGTATATCGGGTATTTAGATTTGAGTCATAATAATCTCTGTGGGAAGATTCCGGCCGGT
TCGCCGTTCGATCACCTTGATGCATCGTCTTTTGAGAGCAATAAATGTTTATGTGGGAAG
CCGTTGCTTAATGCTTGTTAGGATAATAACTCGGGCGAGATAGGATTTGATCCCGAAATT
TCGTCATCATATGTTTGTATCTCTATGTAACATGAAAAAATGGTTATATTTGTTTATTTG
GATTAAGATTTTTTTTAAATAATCGCGAATTAGA