Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03163.2
CDS Infomation

gene=orange1.1t03163
Sequence

ATGGAAGCCAATGCTGTTATTGCAAGGCAACCCAAAGGAAGAGGAAAGATGAAGAATGAG
CCAGCACAAGGTCAGAATCGACGAGTTCTTTGTGATATTGGCAATATGGAGACGCTTCCA
GTTGTGGAGGGGAAGATCTCTCGCCCCATGACAAGGAGTTTTTGTGCACAACTGCAAGCA
GCAGCAGACAAGAACAAGCTCGTAGTGGTTGATGATATTGTAGCTGCAGCCACCAAAAAA
GGTAGAATTGTAAAGAAGCCAGCAGAACCTCAAAAAAAGGCATCTGAAATTGCCAACAAT
GACTTAGTTGTGATAAGCTCTGATGAAGAAGAGAACGTTAAAGAAGTAGAAGCTAAAAAC
GAAAAAATTAAACCTGTTGGGGAGCAGAGCTCAAAGGAAAGGTCCCTGAGGAGGAATGAC
AGGACATTCACTTCAGTTCTCACTGCTAGAAGCAAGGCTGCTTGTGGAATCACTGACAAG
CCAAAGGATTTGATAGTAAACATTGATGCACCAGATGTTAATGACGATTTGGCAGTTGTT
GAATATGTTGATGATATCTACATGTTCTACAAGCTCACAGAAGAAGAGGGTCGAGTGCAC
GATTACATGGTCTCACAGGCAAATATCAATGCTAAGATGAGAACTATCCTTGTTGACTGG
CTGATAGAAGTTCATAACAAGTTTAAACTAATGCCTGAAACCCTGTATCTTACTGTAAAC
ATACTCGATCGCTATCTTTCCATGAAAACTGTGAACAGGAGGGAGCTTCAGCTAGTTGGC
ATTAGCTCAATGCTCATTGCATGCAAGTATGAAGAAATATGGGCTCCACAGGTTAATGAC
TTCATTTGCATATCAGACTATGCTTACATTGGATCACAGGTACTTGTCATGGAGAAAGCA
ATTTTGGAGAAATTGGGGTGGTATTTAACAGTTCCTACGCCTTATGTGTTCCTAGTTCGA
TATGTCAAGGCTTCTGTCTCACCTGATCAGGAGGTGCTGCAAATATCTTGGTCTTGTTTT
GATTATAGTGCAATAACTCAAACTAAATGA

Peptide Sequence

PEP ID

orange1.1t03163.2
PEP Infomation
Sequence

MEANAVIARQPKGRGKMKNEPAQGQNRRVLCDIGNMETLPVVEGKISRPMTRSFCAQLQA
AADKNKLVVVDDIVAAATKKGRIVKKPAEPQKKASEIANNDLVVISSDEEENVKEVEAKN
EKIKPVGEQSSKERSLRRNDRTFTSVLTARSKAACGITDKPKDLIVNIDAPDVNDDLAVV
EYVDDIYMFYKLTEEEGRVHDYMVSQANINAKMRTILVDWLIEVHNKFKLMPETLYLTVN
ILDRYLSMKTVNRRELQLVGISSMLIACKYEEIWAPQVNDFICISDYAYIGSQVLVMEKA
ILEKLGWYLTVPTPYVFLVRYVKASVSPDQEVLQISWSCFDYSAITQTK*

Transcript Sequence

Transcript ID

orange1.1t03163.2
Transcript Infomation

gene=orange1.1t03163 CDS=55-1104
Sequence

TTTACCAGACTTAGCAGAGTAACAGTGTGTGGAAATTGTGACCAAGAATTGAAAATGGAA
GCCAATGCTGTTATTGCAAGGCAACCCAAAGGAAGAGGAAAGATGAAGAATGAGCCAGCA
CAAGGTCAGAATCGACGAGTTCTTTGTGATATTGGCAATATGGAGACGCTTCCAGTTGTG
GAGGGGAAGATCTCTCGCCCCATGACAAGGAGTTTTTGTGCACAACTGCAAGCAGCAGCA
GACAAGAACAAGCTCGTAGTGGTTGATGATATTGTAGCTGCAGCCACCAAAAAAGGTAGA
ATTGTAAAGAAGCCAGCAGAACCTCAAAAAAAGGCATCTGAAATTGCCAACAATGACTTA
GTTGTGATAAGCTCTGATGAAGAAGAGAACGTTAAAGAAGTAGAAGCTAAAAACGAAAAA
ATTAAACCTGTTGGGGAGCAGAGCTCAAAGGAAAGGTCCCTGAGGAGGAATGACAGGACA
TTCACTTCAGTTCTCACTGCTAGAAGCAAGGCTGCTTGTGGAATCACTGACAAGCCAAAG
GATTTGATAGTAAACATTGATGCACCAGATGTTAATGACGATTTGGCAGTTGTTGAATAT
GTTGATGATATCTACATGTTCTACAAGCTCACAGAAGAAGAGGGTCGAGTGCACGATTAC
ATGGTCTCACAGGCAAATATCAATGCTAAGATGAGAACTATCCTTGTTGACTGGCTGATA
GAAGTTCATAACAAGTTTAAACTAATGCCTGAAACCCTGTATCTTACTGTAAACATACTC
GATCGCTATCTTTCCATGAAAACTGTGAACAGGAGGGAGCTTCAGCTAGTTGGCATTAGC
TCAATGCTCATTGCATGCAAGTATGAAGAAATATGGGCTCCACAGGTTAATGACTTCATT
TGCATATCAGACTATGCTTACATTGGATCACAGGTACTTGTCATGGAGAAAGCAATTTTG
GAGAAATTGGGGTGGTATTTAACAGTTCCTACGCCTTATGTGTTCCTAGTTCGATATGTC
AAGGCTTCTGTCTCACCTGATCAGGAGGTGCTGCAAATATCTTGGTCTTGTTTTGATTAT
AGTGCAATAACTCAAACTAAATGATTGACATTTCTGTCCAACATAGATGGAGAATCTGGT
ATTTTTCCTAGCCGAACTAGGTATCAGCCATTATCCCACTGTCATTTGTTACTGCCCGTC
CATGCTTGCTGCCGCATCTGTATACGCTGCACATTGCACCCTTAACAAGAGCCCTCTTTG
GACTGAGACTTTGAAGCACCACACAGGCTACAGTGAAGAGCAACTAAAGTAATGTCCCCT
TTCCATTATTATCTGTAATTCTTCTTACTGTAGTATCCTTTATATTTGGTTACTGATTTC
TGGTGTTAAGTGGCGCATATCAGTAAGCTCATGTAGCATGGTATTTGCTCATGGCTCTAA
TTTGTAACTGAGACAAGTGATATGCTCTAACTTCACATGTTATATTCCATGTAACAGGGA
TTGTGCAAAGCTCTTGGTAAGCTTTCACTTGGCAGCTGCGGAAAGTGAGCAAAAGCTAGG
AGTTTATAAAAAATTCTCAAGTCACAAACGAGGCGCTGTAGCTCTTCTCAATCCTGCTGA
ATATCTTATGACCTAATCAACATATAATAGAGGAAGTCAATGTGTATCCAGATGATTTTG
TAATTGGATGCTCCGGTTGTGGTTGTAAATTCTTAATTGACTGAAGCAAATGCACAATGA
ATATTGAAAACCTATCAAGTGAATGCAAGAAGTTTTGCTCTTCAGTTTTCTATCTTCCCT
TTACTTTCTTAGAGCTTATTTGTTCTTTCTTTACAGCTGACATAAGTTTTCATTCTTAAA
GCAGCAATCACTGTCTTTTAACTGAGATAA