Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03161.1
CDS Infomation

gene=orange1.1t03161
Sequence

ATGGACGGTGGTAAGGCTAAAGAAGGGTGGTGCATGCTAAGATACGCCGGTGGTGTGCAG
AATAGTGATAACGAGATAATCAATCGTACAATGCTCAGATTCCGTCCGATTGCACCGAAA
CCCGTGTCAAGCGGCACCGTTTCAGGTAACTTGTTAGTTGATAGGTTTACTAGCAAAAGA
TCTAAGAGAAAGTACGTTCGGGTTCGCAAAAATAATGGGTACAAGAGAAAGAATAATAAT
AATAATAATATTAATAATGATCATGATGAAGAAGAAGAAGATGGATTAAACAAGAACGTT
AACGTTGTTACGACGCTACAGTTGTTGCCTGAGAGACCTACTACGAAAGATCAAGAGTCG
TTTTCTTGGTGCAATAATAATGTTAGCAAGAATGATCCTGATTTGATGATGGGTTCAAAA
GTTGACGATAATCGTCAGGATCTGAGGGCTGCTGCTGCTATCTGGCTAAACATGAAGGGG
AAAGATTTGATGATCAACGGTGTTGGTGGGGGTGGGTTTGGTGTGTCAGATCAGACGGTG
GTGGAAGTTCGTCGGAGGACGGTGGTGGAATCTTGGGTGACTGTGGAGAGCGTGACTGCA
GACACATGCATGGATATATTAGGACGTTGTTTGGACGTTGAGGGAGTGAAGACTGATCTT
GATAAGGACACGTGTCCAGGGTTCATATCAGATGGTTTTAACCGGGTTCTGTGGGTTAAC
AAAGCTTACAAGAAGATGGCGGTGAATGGCGACGGCTGCTGGCCGGAGATAGAGATAATG
GTTTGGTTGGTCCTTAAAGAGAAGTTGCCGAGTTTGGATTACTCGTTGTTTGCGAGTCAA
GTGAGGCTGCAGTACACGTGGCAGAATGAGAAGTACTCGAAGATGGTACCGTGTGATGCG
TTCAGAATGGACGGTGGAGGGTTTGCATGGAGACTCGACGTTGAAGCTGCCCTCAGTTTG
GGCCGTTGA

Peptide Sequence

PEP ID

orange1.1t03161.1
PEP Infomation
Sequence

MDGGKAKEGWCMLRYAGGVQNSDNEIINRTMLRFRPIAPKPVSSGTVSGNLLVDRFTSKR
SKRKYVRVRKNNGYKRKNNNNNNINNDHDEEEEDGLNKNVNVVTTLQLLPERPTTKDQES
FSWCNNNVSKNDPDLMMGSKVDDNRQDLRAAAAIWLNMKGKDLMINGVGGGGFGVSDQTV
VEVRRRTVVESWVTVESVTADTCMDILGRCLDVEGVKTDLDKDTCPGFISDGFNRVLWVN
KAYKKMAVNGDGCWPEIEIMVWLVLKEKLPSLDYSLFASQVRLQYTWQNEKYSKMVPCDA
FRMDGGGFAWRLDVEAALSLGR*

Transcript Sequence

Transcript ID

orange1.1t03161.1
Transcript Infomation

gene=orange1.1t03161 CDS=131-1099
Sequence

CGCCTGAATTATCTCGGGGGTAGAGAGAGTGTGTGTGTGTGTGTGTAGTTTTTTCGTTTC
CAAAAAAAAAGAAAAAAAGAAGAAAGTAAAAGAGGAGACAAGAGGGGTATCTCCGGCACC
GGTTCATGATATGGACGGTGGTAAGGCTAAAGAAGGGTGGTGCATGCTAAGATACGCCGG
TGGTGTGCAGAATAGTGATAACGAGATAATCAATCGTACAATGCTCAGATTCCGTCCGAT
TGCACCGAAACCCGTGTCAAGCGGCACCGTTTCAGGTAACTTGTTAGTTGATAGGTTTAC
TAGCAAAAGATCTAAGAGAAAGTACGTTCGGGTTCGCAAAAATAATGGGTACAAGAGAAA
GAATAATAATAATAATAATATTAATAATGATCATGATGAAGAAGAAGAAGATGGATTAAA
CAAGAACGTTAACGTTGTTACGACGCTACAGTTGTTGCCTGAGAGACCTACTACGAAAGA
TCAAGAGTCGTTTTCTTGGTGCAATAATAATGTTAGCAAGAATGATCCTGATTTGATGAT
GGGTTCAAAAGTTGACGATAATCGTCAGGATCTGAGGGCTGCTGCTGCTATCTGGCTAAA
CATGAAGGGGAAAGATTTGATGATCAACGGTGTTGGTGGGGGTGGGTTTGGTGTGTCAGA
TCAGACGGTGGTGGAAGTTCGTCGGAGGACGGTGGTGGAATCTTGGGTGACTGTGGAGAG
CGTGACTGCAGACACATGCATGGATATATTAGGACGTTGTTTGGACGTTGAGGGAGTGAA
GACTGATCTTGATAAGGACACGTGTCCAGGGTTCATATCAGATGGTTTTAACCGGGTTCT
GTGGGTTAACAAAGCTTACAAGAAGATGGCGGTGAATGGCGACGGCTGCTGGCCGGAGAT
AGAGATAATGGTTTGGTTGGTCCTTAAAGAGAAGTTGCCGAGTTTGGATTACTCGTTGTT
TGCGAGTCAAGTGAGGCTGCAGTACACGTGGCAGAATGAGAAGTACTCGAAGATGGTACC
GTGTGATGCGTTCAGAATGGACGGTGGAGGGTTTGCATGGAGACTCGACGTTGAAGCTGC
CCTCAGTTTGGGCCGTTGATATAAGAAAATCAGAAAAAAAACTTCATCAAATGAAGTTTC
AAATCAACGAGTAAAATAATCAGGTAAGATAGGGGTGTTGGGAGTTGGGACACGTGTCCT
TATCTTGCAGTTGGCTTGTTATATATGGTGGTATCTTATGCTTTCTAGAACAAAGTTGAT
GTTTATCTATATTACTACTATATATATACATGTGTCTGTGTAAACTTGAATAACGTATGA
CACAAGCAAATGGTGTTTACTCGCTGTTTA