Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t03005.1
CDS Infomation

gene=orange1.1t03005
Sequence

ATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTA
AGGGCAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCG
GGCATGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTCGTCGCC
GCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATTTCC
GGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTT
CTACGAGGCATCCTCTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTT
CTTAAGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGT
GCATGGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTAT
GCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATTGGT
TTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGCGTTTGATGGAGCTTCAATGAACCCA
GCAGTGTCATTCGGGCCAGCTTTGGTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGG
GTCGGGCCACTCATCGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAAC
CAGTCTCACGAGCAGCTCCCAACAACCGAGTACTAA

Peptide Sequence

PEP ID

orange1.1t03005.1
PEP Infomation
Sequence

MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVA
ASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL
LKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIG
FIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN
QSHEQLPTTEY*

Transcript Sequence

Transcript ID

orange1.1t03005.1
Transcript Infomation

gene=orange1.1t03005 CDS=277-1032
Sequence

CTGCTTAGCTGTATCAATAGTGACTCGGCTGCTGGTGCAGGAGTAGTAGCTGCCCTTTAA
TCAAATAAATAATCGCTAATCCACTGCTAACCAACTTATAAATTTCGTTCATAAAAATTT
ATTGTACAACCGGAAACCGGCTTTAACCGCCTCCCAAAAACTACGCATTTCGAATATAAG
TAGAAGCTCCTAGTTGAGAAGTGGAGACCAGTACACTTACGTGAACCAGTAGTAATCACA
CCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATC
TCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAAGCTCACT
CACAACGGCGCCAACACCCCCTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCC
CTTTTCGTTGCTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTC
ACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAG
ACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGTTTTCGAG
ATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAG
GGAAGCTTGGGGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTG
GCGGGCGGGGCGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTG
GTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCATCGGTGGTGGG
CTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTCTCACGAGCAGCTCCCAACA
ACCGAGTACTAAGCTAAAAGCTTGCCATCTATGTGAGTTTGCACGGATGTTGTATTTAAT
TTGCTTTTACCGAGGTTCTTTCTTTTTATTTTTAATTTGTGTTTAATTTATGGCCGTTGA
TCTGTTTCCATCGTCATGAGCTGCTGGATTATTGTATCGCGATAATTATGGAGTCCCAGG
CTATGGCTTTGTATTTCTACTCGCACTTCAATTGCTTTGATGTCTATTTCATTAACCGGG
TCTATCTTTAATTTTTATATTAACAGTTACATTTTCTTCCGCCAATCTGGTTAAAGTACA
GAGTTAGGCGGCGACAATACTATTATATGTGAATTATATGAAGTTAGAGTTGAAATATTA
TTATTTTATCATTTAATTTTTTTA