Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02616.2
CDS Infomation

gene=orange1.1t02616
Sequence

ATGGCTCCGAAGAGAGGAGGAAAGGTTGCTGCAGCACCAGCAAAGAAGAAGCCGGAGAAG
GTTGTGAATCCACTGTTTGAGAAGCGTCCGAAGCAGTTTGGTATCGGTGGGGCTCTGCCG
CCGAAGAAGGATCTTCACCGTTATGTGAAGTGGCCCAAGGCTATTCGTATTCAGAGGCAG
AGGAGGATCCTCAGGCAGAGGTTGAAGGTTCCACCTGCTTTGAACCAATTCACCAAGACT
TTGGACAAGAATCTTGCCTCAAGTCTTTTCAAGTTGCTCCTCAAGTACAGGCCTGAGGAT
AGAGCTGCTAAGAAGGAACGTCTTTTGAAGAGAGCTCAGGCTGAGGCTGAAGGGAAGACT
GTGGAGGCTAAGAAGCCTATTGTTGTGAAATATGGCTTGAACCATGTGACATACCTCATT
GAACAGATTGTCCACAAGAAGACAGCTTCTGTATTGTGTTTGACAACAGTTAAGAATGAG
GATAAGATGGAATTCAGCAAGATCCTTGAGGCCATCAAGGCTAACTTCAACGACAAGTAC
GAGGAGTTAAGAAAGAAGTGGGGAGGTGGTATTATGGGCTCCAAATCACAGGCAAAAACC
AAGGCCAAGGAGAAACTTCTTGCCAAGGAAGCTGCTCAGAGGCTGACCTAG

Peptide Sequence

PEP ID

orange1.1t02616.2
PEP Infomation
Sequence

MAPKRGGKVAAAPAKKKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAIRIQRQ
RRILRQRLKVPPALNQFTKTLDKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKT
VEAKKPIVVKYGLNHVTYLIEQIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKY
EELRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRLT*

Transcript Sequence

Transcript ID

orange1.1t02616.2
Transcript Infomation

gene=orange1.1t02616 CDS=145-795
Sequence

TACAAGAGCACCCATTGATATAACGCCACATTGCCCTAACTATAAAACATACTTCAAGTC
CTCTTACTTAGTCTGTTCTGGCTAGGGTTTTTCTTTTCATTCGCCGTTCTCCAAAACCAC
AGAGCCTAGCAGAAGCGGCACGAAATGGCTCCGAAGAGAGGAGGAAAGGTTGCTGCAGCA
CCAGCAAAGAAGAAGCCGGAGAAGGTTGTGAATCCACTGTTTGAGAAGCGTCCGAAGCAG
TTTGGTATCGGTGGGGCTCTGCCGCCGAAGAAGGATCTTCACCGTTATGTGAAGTGGCCC
AAGGCTATTCGTATTCAGAGGCAGAGGAGGATCCTCAGGCAGAGGTTGAAGGTTCCACCT
GCTTTGAACCAATTCACCAAGACTTTGGACAAGAATCTTGCCTCAAGTCTTTTCAAGTTG
CTCCTCAAGTACAGGCCTGAGGATAGAGCTGCTAAGAAGGAACGTCTTTTGAAGAGAGCT
CAGGCTGAGGCTGAAGGGAAGACTGTGGAGGCTAAGAAGCCTATTGTTGTGAAATATGGC
TTGAACCATGTGACATACCTCATTGAACAGATTGTCCACAAGAAGACAGCTTCTGTATTG
TGTTTGACAACAGTTAAGAATGAGGATAAGATGGAATTCAGCAAGATCCTTGAGGCCATC
AAGGCTAACTTCAACGACAAGTACGAGGAGTTAAGAAAGAAGTGGGGAGGTGGTATTATG
GGCTCCAAATCACAGGCAAAAACCAAGGCCAAGGAGAAACTTCTTGCCAAGGAAGCTGCT
CAGAGGCTGACCTAGGATTTTGCTCAGTCTTAAGAGAGTCCCAATGTTTTGTTATTTCTT
GTGCTTTCATCATCTTTTTATTTTAATGAACATGTTTCTATGTAGTCTCTTAGCATTTTA
CCTTATTAAGATTTTTAATTGAACTTCTGAACTGTTATATGTTTGCACCATTAGTATGTG
CCTTTTTGATATGAGGAACTTATTGCAAGTCCACATTCCTATATAGATTTTGTGTGATCT
TTTGTTGCAGCAATGTGATTGATTCCCCAGTTTTAATTTTTTTTTAATTAACATAGCCAC
ACTGCCTTTTCTTGAGGATATTAGCTGTTAATGGAATGTGCTAATCTCATGGTTGAGGTT
AAGACTTTTGGCTTTTGTTTTTCAATTGGTTAGAAAGCTGAAGCTGCAGGTACTTGTGCA
AGTTTTGTGTTGTGGGTCAGCTAATGGTGGATACAACAGCTAATGGTAGCATATACTGAG
AACGGTTGCCATGTGCATAAACTATCATTGAAATTGAATGGAAGTATTGCCAGAACTTTT
ACAAATATATGTTTATTTAAAGAAATTGAGAGGTTCAATATGTCGTTGAAAGGACAGATC
CAATAATTGAGAACAAAAAAATAAATTGTGTTCTAGTTGCCTAATAATTTCTGCAAACGC
GTTTGATGCATAAAATGTTCTTCAACCCAATCAGCAAGGAACTACTCCATCTATTTATAG
AAAATAAAAATCAATTTACATAGGTCTTGAATGTTCGAGCTCAGGTTGCACTTGCCGAGC
CACTAGCCATATTTCTTGCTGAGAAGTTCTCCATTAAAATTCTCTGCAAAGGAGGTCCAT
TTGTAAGAATTGTGAGAAAATTCAACAATTACCACTATGTTTCGAGCTCCGAAACTCAAA
AAGACTTGTTAAGCAACACGAGGGCAGTCTCTTAATGCTTATATGATGCTTCATTATTTC
TGTGGAGGACCCCGAGTAAAAATCAATTGCCAATTAAGTAATTCCTTGTTACTTAACCGC
AGATCTGAAAGTTCTGTTAAGGTGGATTTAAGTATCTCAAGGCATTCTAGCAGCATAACA
CTCTTCTCTTAAGCTTATGGCGACATATTCCAACATCGAATATATCTCTTCCGAACATGG
GTGCCTTCCATCTCCAACCATGAACTCATGTACAACATCATTAATCTCGATTACACTACA
ACCAGGGTTCTTGACAATATTTCTCTCTTTCATTAATCTCCTCATCTTACCGGCATCATC
CCATTGTGCCTTCGCAGCATATATATTTGACATAAGAACATAGTTTCCATCATTGAACGG
CTCCAACTTAATTAACCGTTCCATTGCAATCTCAGCCAACTCAACATTGGCACCATCATC
GGCAGAAGCACAAGCAGTAAGCAAAGATCCCCACAAAACTGCATTTGGTTCCATTGGCAT
GTTTCTGATAACCTCATAGGCCTCATCCAGGAGCCTTGCCCTGCACAAAAGATCCACCAA
GCAACCATAATGCTTGACATTGGGCTCAACCTTGTAATCCCTTCTCATGTTATAAAAAAT
CTCCTTTCCTTTCTCAATCAGCCCCGCATGAGAACATGCAGTCAAGACCGCAATCAATGT
AACATTATCAGGTTTTATTCCACTCATTTGCATCTGCCAAAACATCTTTACCGCTTCCTC
GCCACAACCATGTATTGCTAGTCCTCCAATAATAGAATTCCAAGTACAAACATTCTTCTC
GAGCACAATCTTGAAAACTCTCAAAGCTTCTTCAATATACCCACATTTCGCATACATGTC
AGTAAGTGCAGCACCAAGCTTGTCATTCAAAATAATGCAATTTTTATCAACAAACTCGTG
CACCCATTTTCCCATCTCTGAAGCACCAAGGTTGGCGCAAGCCGATAACACAGACACCAA
AGTCAGTTCATTCACCTCAACACCAGAATCTCTCATTTTACGGAACAAATCAATCCCTTC
CCTATAATTCTTTTGCTTAACATGACCGTTGATCATAGCAGTCCAAGTAACCATGTTTTT
CTCGGTCATTTGATCAAACAACAACTGGGCAGACTTGACATCGCCAAAATTACAATAAAA
AGTTATCAAACGAGTGAGTGAATGTATCACCGAGTTAAAATCTTTGCTCTTGACAACGAG
CGAGTGCACTCCTTTCACTTGTCGAAGATCACCACAAGCCTTTAAAAGAATTGGGTACGT
GAAACTGTCAGGGTCCAGCCCATTCCCTATCATTTGTGTATAAAGTTGAATTCCTCTGTG
GCCTAGACCAGCCTCTGCGTAGCCTCTAATCACGGTATTAAAAGCAAAAGTTGATGGGTT
AATTATTTGGTTAAAAACTAAGTGAGCATAGGCAATTTGGGATGAGTTTACTAAAGATTC
TATGAGCTTGGCTAGTTGGGTATCCGAAATGGTGCTGTTGTCAAAAGAAGCTTTAATGAT
TTGAGCTTGGACCTGCTTGAACTGCACTAAGTGGGTGCATTTTTGAAGTAAGGGAAGGTG
GTGATGAGATTTAGTGGCGGTGTTTGAATTTTTATGCGAATTTGCTGAGTTGGTAAAGTG
TGTAAATTGAGAATTTGGCACTAGCTGCTTGAGCATGTTTCGCAGTTGTTACTAAACTAG
GAGACGCAGAAACAGAAATTGTTGTGAAGTTAGATGATGATTTATACCACAGCGAATATT
GATTGAAGATTTCACAATTTGACATCAGAGTTGAAGGAAGTTATCAACTTACATATACCA
TGAATTCGCTACTGAACCCTTGTTCCAGTAGATTTTACCCTTTTT