Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02576.1
CDS Infomation

gene=orange1.1t02576
Sequence

ATGGAGAACAACCAGCAAGGCCAATCCTCCTCATACCCACCCCAGCCTCCCTCCGCTGCT
GCTGCTGCCACCGCAACGGCGCCGTTTCATCACCTAATCCAACAGCAGCAGCAGCAGCTC
CAAATGTTCTGGTCCTACCAGCGGCAAGAAATCGAACAAGCGAACGACTTCAAGAACCAC
CAGCTGCCGCTCGCCCGCATCAAGAAAATCATGAAGGCCGACGAGGACGTTCGCATGATC
TCCGCCGAGGCCCCGATTCTGTTCGCCAAGGCCTGCGAGTTGTTCATCCTCGAGCTCACG
ATCCGCTCGTGGCTCCACGCCGAGGAGAACAAGCGCAGGACTCTACAGAAGAACGACATC
GCGGCCGCCATCACCAGGACCGACATCTTCGACTTCTTGGTCGATATTGTGCCTAGGGAT
GAGATTAAGGACGAGGCTGCCGGCTTGGGCGGCATGGTGGGGGCCACTGCCAGTGGGGTT
CCGTATTATTATCCTCCAATGGGGCAGCCCACTGGGACTGCTGGCCCCGGTGGGATGATG
ATTGGCCGGCCGGCTGTCGATCCTACTGGTGTTTACGTGCAGCCGCCTAGTCAGGCTTGG
CAGTCCGTTTGGCAGACGCCCGCGGGGACTGGGGACGACGGCTCTTATGGCAGTGGTGGG
AGCGGGGGACCTGCCAATCTTGATGGTCAAGGCTAG

Peptide Sequence

PEP ID

orange1.1t02576.1
PEP Infomation
Sequence

MENNQQGQSSSYPPQPPSAAAAATATAPFHHLIQQQQQQLQMFWSYQRQEIEQANDFKNH
QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI
AAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGATASGVPYYYPPMGQPTGTAGPGGMM
IGRPAVDPTGVYVQPPSQAWQSVWQTPAGTGDDGSYGSGGSGGPANLDGQG*

Transcript Sequence

Transcript ID

orange1.1t02576.1
Transcript Infomation

gene=orange1.1t02576 CDS=303-998
Sequence

GAGAGAGAGACTGAGAGAGCACAGAAACTCAAGCATCGTCTCGGCCGTACCTTATCCCCA
TAAAAATTCTCCCATATAAAATCTCGACCATCCATCTAAATTCAAACCCTTAAACAGCGA
ACGTATGCTCCCACATCTGATCAAACACAAACCCACATCTGTCCACAATTCACTCATCCC
CCTTCATCAAAACAGTGGAACAATCTAAACAAGCCAATCCACAATCAGCAATCATCAATC
ATCATCAATTCCCAATCATAATTCATATTAATCAAAAAAGAAAAAAAAAGGATCAAAATC
CAATGGAGAACAACCAGCAAGGCCAATCCTCCTCATACCCACCCCAGCCTCCCTCCGCTG
CTGCTGCTGCCACCGCAACGGCGCCGTTTCATCACCTAATCCAACAGCAGCAGCAGCAGC
TCCAAATGTTCTGGTCCTACCAGCGGCAAGAAATCGAACAAGCGAACGACTTCAAGAACC
ACCAGCTGCCGCTCGCCCGCATCAAGAAAATCATGAAGGCCGACGAGGACGTTCGCATGA
TCTCCGCCGAGGCCCCGATTCTGTTCGCCAAGGCCTGCGAGTTGTTCATCCTCGAGCTCA
CGATCCGCTCGTGGCTCCACGCCGAGGAGAACAAGCGCAGGACTCTACAGAAGAACGACA
TCGCGGCCGCCATCACCAGGACCGACATCTTCGACTTCTTGGTCGATATTGTGCCTAGGG
ATGAGATTAAGGACGAGGCTGCCGGCTTGGGCGGCATGGTGGGGGCCACTGCCAGTGGGG
TTCCGTATTATTATCCTCCAATGGGGCAGCCCACTGGGACTGCTGGCCCCGGTGGGATGA
TGATTGGCCGGCCGGCTGTCGATCCTACTGGTGTTTACGTGCAGCCGCCTAGTCAGGCTT
GGCAGTCCGTTTGGCAGACGCCCGCGGGGACTGGGGACGACGGCTCTTATGGCAGTGGTG
GGAGCGGGGGACCTGCCAATCTTGATGGTCAAGGCTAGGGTACGTGTGCTTTTGTTTGTT
TGTTTGTTTTACAGTTGTTTTGGATTTTTTGTGTAGTTTAAAGTTGTGACTTTTTTTAAA
AGGTGCTTGACTTTTCTGTTTAATTTGAATTTTCTGTTATTTTTGGACTTTTGTGGTCAT
TCCAGATTTGGGTTCTAGGATATTTTGAAATGTTGGCATGACTTGGTAGTGAAGTCAGGA
AGTAAGCAGTGCTTGCCTATTTGTATCGGCTATGTTTTGTTGTTGGTATGGCTGAAATCC
TTTGTATCCCCTTTGTGTTCTTCCTTTAAAATGAGTAGCCATTCCTGCATAAAGAAATGT
AGTTATTTTGTTGTTATATGGAAACGGGAATTCTTATCTTAGGGGATGGATCGGAGAGTG
TAAAGAGAATTGGGGTTTGGTAAACAGCTTGACGAGTTTCTATACAATGAAACAGATAAG
CTTGTTGAAGTTCTGTTAGTGGTTATGCTGTGAGAGCCCCTTTGGATGGGGGAGTTTTCA
TTAACATTATTGATTAACCAACCTCAGGTCAGCAGAATCCACAAAACACGTTTATGATTT
TGACCATCACTGTAATTCCTCTCTGATAAATTGTAGCTGATAAATAGTCTAGTTAGTTTC
CTAATTTTCTTCGTTTAGTGATCCAATGCCGGTTGTAACATTCAGTCATTTGTCAGTGTG
GTGTAGGCATCAACAAAATGGTAACAGATAATTATATCCCTTTTACTTTTTGCCTTTCCT
TTGGTATATCTGATATATTGCTTCAGTTAGCTTTTTGATTTCGAACAATTAGAAACTGTA
ATTTTTCTAGTTACAAACCAACAAAAAATTGACACATGTCATCGTATACTTGTGTTGAGC
ATCCTAAAATTTTTGACCTTAAACTGTCTCCCAGCCACATGAAGCTATTTCAAAACTGAA
CTTGGTTCCTGGCTGTAGTAGAATTCAAGCTAAACCTGAGCAGTGATTTTAAAAGACCAT
GTCATGCATGAGCACTTTAGCCCGCTCGGATGGCTTCGTTCCCTAACAAAGTACAATATC
TGCTTTTGATAAGCCTTACAAAGTACGGTATCATCTGCTTGGAAACAGAGTTTCCTTCGA
AATGAATTCTTCTTTCTCCCCTGGCACTCAATTATCTTCCTCATGTTTCAAAGAATAATT
TTCCTTTGATATCATGTAGATGGTTTAGACTTTCACAACATTGCTAATTAAGCGGGCAAT
AATAACTTCATGCCTTTAAAGTGGTCTGAATTTATGGGAATAAGCAATAGATTGACATTT
CACTACCGTTGAGGTGTATTCAGTTGGTAGAAGGAGCTGTTTACTACTAAATATAGATTG
TGTAGTTTTGGCTTGACTTGAATTTGACCTGAGCTCAAACACTGATTTGATGTGACTGAG
GCAAGCCCGAGTTATTTAATGTTCGATTCAGCTCCTTCTGCTAGAAAGAGGCAGTTTAGT
TGCTTGAATGTGGGATTCTCTGGAATGGTATTGTCTTTCTTGAGATTGTCTTGATACACT
GTTGAATGTATAAAAGAATTTAATATTGTTTGCATTCTTAGTGAATAAAATTTTATTTTG
AAATGGGATTTTTCAGTCTTGCATTTAAAATCTCTTCTTAAGCCAGCACTCTTGTTGTGA
TTATAGTCTGTGAATTTCTTTTCCAGCATAGTTTCAATGAAGTGTGGTATGAGTAATTTG
ATCTTGAATTACATGAGTTGAATATTGACTTATTACTGATCCAGACTATTTATCTTCTTT
CCAACTTTTGAGACGTAAGGTTTATTGTATAGGGGAACAGCATGCAATTTTTTCACCTTA
TAGCCTCAAGTTGGGTTAAGCGAGACTTCCTTTTAACTCAATTTCGAGTTTGGAATTTAT
ACAATGAACTTAAGGAAGAAGCATACAATTGTTCATTTAATATACAGTTGTAGTCAATTC
ATAAATTCTTGCTGCATGTGGCATACTTGTCATTAAAGTGTCACATGTTTGTTGTGTCTT
CTCCAACTTCTGGAACAATGAGGTGTTCTCTTCCTTTT