Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02546.1
CDS Infomation

gene=orange1.1t02546
Sequence

ATGGCATTCTCAAGCTCAACCACACCCACGGTAGCCTATTTTAGCTGCTTCAACACTTTT
AATGAAATCTCCTCTCCACTCTTCAAGCCTCCTAAACTCCCTCTCTTTTGGCCATGGGAA
AAGGTAAAGATGGGACCATTGAGTGCTTCCCCAATGGGTTTTGGCACCTGGGCATGGGGC
AACCAGTTTCTTTGGGGATATCAAGAATCAATGGACTCTCAGCTTCAACAAACCTTTAAC
TTGGCCGTGGAGAATGGTATTAACCTCTTTGATACTGCTGATTCTTATGGGACTGGCAGG
TTAAATGGAAAGAGTGAAAAGCTTCTTGGAAAATTTATCAGTGAAATTCCAGGGCAAAAG
CAGGTACAAAATAATATTGTGATTGCTACAAAGTTTGCAGCATACCCTTGGCGTCTGACA
CCGGGGCAGTTTGTAAATGCATGCAGGGCCTCTCTTGCCCGTCTGCAGATTGAGCAAATT
GGAATTGGGCAATTACATTGGTCTACTGCAAATTACGCTCCTCCACAAGAATTAGCTCTT
TGGAATGGTTTAGTGGCAATGTACGAGAAGGGTTTAGTCCGCGCAGTTGGGGTGAGCAAC
TATGGACCAAACCAGCTTGTGAAGATTCATGATTACCTCACAGCTAGAGGAGTCCCTCTG
TGCTCGGCACAGGTGCAGTTTTCTTTGCTGAGTATGGGAGAAAATCAGCTGGAGATCAAG
AATATATGTGATTCTCTGGGTATCCGCTTGATATCTTATAGCCCTCTAGGACTCGGAATG
CTTACTGGGAAATATACACCTTCTAAACTTCCCCGTGGACCTCGGGCATTGTTATTCAGG
CAAATTCTTCCCGGATTGAAGCCTTTATTGCGCTCTCTAAAAGAAATTGCAGAAAGACGA
GGCAAAACCATACCACAGGTTGCGATAAACTGGTGCATCTGCAAAGGTACCATACCCATT
CCTGGAGTTAAGTCCGTGAAACAAGTTGAGGAAAATCTGGGTGCTCTTGGTTGGCGACTC
AGTTCAGATGAGTTGCTTGAGCTAGAATACGCAGCACTTGAGTCCCCCCAGAGAATGATC
CAAAACATTTTTCAGACAAGCTTATCGAATTTTCAACGAGCAATTGGGCAGATCGGACGA
GAAGCATACAGAGACGATAGTTGA

Peptide Sequence

PEP ID

orange1.1t02546.1
PEP Infomation
Sequence

MAFSSSTTPTVAYFSCFNTFNEISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWG
NQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQK
QVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELAL
WNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIK
NICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERR
GKTIPQVAINWCICKGTIPIPGVKSVKQVEENLGALGWRLSSDELLELEYAALESPQRMI
QNIFQTSLSNFQRAIGQIGREAYRDDS*

Transcript Sequence

Transcript ID

orange1.1t02546.1
Transcript Infomation

gene=orange1.1t02546 CDS=1-1164
Sequence

ATGGCATTCTCAAGCTCAACCACACCCACGGTAGCCTATTTTAGCTGCTTCAACACTTTT
AATGAAATCTCCTCTCCACTCTTCAAGCCTCCTAAACTCCCTCTCTTTTGGCCATGGGAA
AAGGTAAAGATGGGACCATTGAGTGCTTCCCCAATGGGTTTTGGCACCTGGGCATGGGGC
AACCAGTTTCTTTGGGGATATCAAGAATCAATGGACTCTCAGCTTCAACAAACCTTTAAC
TTGGCCGTGGAGAATGGTATTAACCTCTTTGATACTGCTGATTCTTATGGGACTGGCAGG
TTAAATGGAAAGAGTGAAAAGCTTCTTGGAAAATTTATCAGTGAAATTCCAGGGCAAAAG
CAGGTACAAAATAATATTGTGATTGCTACAAAGTTTGCAGCATACCCTTGGCGTCTGACA
CCGGGGCAGTTTGTAAATGCATGCAGGGCCTCTCTTGCCCGTCTGCAGATTGAGCAAATT
GGAATTGGGCAATTACATTGGTCTACTGCAAATTACGCTCCTCCACAAGAATTAGCTCTT
TGGAATGGTTTAGTGGCAATGTACGAGAAGGGTTTAGTCCGCGCAGTTGGGGTGAGCAAC
TATGGACCAAACCAGCTTGTGAAGATTCATGATTACCTCACAGCTAGAGGAGTCCCTCTG
TGCTCGGCACAGGTGCAGTTTTCTTTGCTGAGTATGGGAGAAAATCAGCTGGAGATCAAG
AATATATGTGATTCTCTGGGTATCCGCTTGATATCTTATAGCCCTCTAGGACTCGGAATG
CTTACTGGGAAATATACACCTTCTAAACTTCCCCGTGGACCTCGGGCATTGTTATTCAGG
CAAATTCTTCCCGGATTGAAGCCTTTATTGCGCTCTCTAAAAGAAATTGCAGAAAGACGA
GGCAAAACCATACCACAGGTTGCGATAAACTGGTGCATCTGCAAAGGTACCATACCCATT
CCTGGAGTTAAGTCCGTGAAACAAGTTGAGGAAAATCTGGGTGCTCTTGGTTGGCGACTC
AGTTCAGATGAGTTGCTTGAGCTAGAATACGCAGCACTTGAGTCCCCCCAGAGAATGATC
CAAAACATTTTTCAGACAAGCTTATCGAATTTTCAACGAGCAATTGGGCAGATCGGACGA
GAAGCATACAGAGACGATAGTTGA