Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02113.1
CDS Infomation

gene=orange1.1t02113
Sequence

ATGGAATCGGTATCTCTAAAGCAATTAATTTCCGCGACAAATTGGAGATACCCAATAATC
CCACTCCGTTTGTACTCAAGAAATCTTAGTCTACACTTTCAAAATCGTCGCTTTCCGTGT
CCTCTTATTCGCTCTAAACAATCTGACTTTCAAGATTTTCAGGGCTATGCAAAACCTAAA
CGTCTGTTGCCAGCCACAGAAGTGAAAATCTCTACTGATACCTCACCAAGGACATTTTCT
TCTTTCAGTCCCAAAGAATCTCGGTCTTTGTTTAAGGTTAAGATAAAGACAAGTAACATA
TATGGCTCAAGTCTGAGTGATTTGAATGCTGGTATACTCTTGTGCTTGATAGACGAAAAT
GGTGACTCAATATTACAGAGAATACCTTCTAGTTCAATGACTTATCATTCTACCAAGACA
GAGGACTCAATTGATCCTGATAGGATGCACTTTCAAAGAGGTTCTTCTGACGAGTTTACC
TTTGAGGGACCTAGACTGGGACAAATTGAAGCTCTTTGGATCAGTCTTGAATCAGGTCAG
TGGAGATTAAGAGGCATAAGCCTTACAATCATCGATGCTTGTGAATCTTCATTGGAAGAA
GATGGCGAAGAAAAGATCCAATGTAAAGGCTATTGTTATGATTTTGAAGTTGATGATATC
TTGCTTGGGGAGGGAAGCAATGCGTCCATGGTGGAGCTTAGACCTTCCCGTTTAACTGAA
TTATCTGGGCTCGACCCATTCACCTTCTTGGCTACAGCTGAGTCACAATCAAATTCACTT
TCGAATGCTCAGATATCTAAGGAGGAAAGCCTGAAGGAATATGCAGATTTGAAGTTCTCT
TTATTACTTTATGATGCTATTTTGATTCTTGTTGGTACATCAGTTACATCATTCTCAATT
GGCGAAAGTTCTGCTTTGGCATTCCTGATTGGTGGGTTCAGCGGGTTTTTGTATCTGTTG
CTACTGCAAAGGTCCATTGATGGATTGCCAGCCCCAAAATCAATTTCCAGCCAGCCCCAG
AATCAATTTAAATCTCCATTGTTGAGTATTGCATTGGCAGTAGGAATATCATTTTTAGCT
CTCAAGTATAGTAACATCTCAGGAGATGATGTTCTTCCCTTTGTGCTTACCCCCAAAGAC
CTCTTAGTTGGGATGCTGGGATTTCTTGCATGTAAAGTGGCCGTGGTTCTGGCTGCCTTC
AAGACAGTGCCAGTGAGTCTGAAGGAGAACAAGTAA

Peptide Sequence

PEP ID

orange1.1t02113.1
PEP Infomation
Sequence

MESVSLKQLISATNWRYPIIPLRLYSRNLSLHFQNRRFPCPLIRSKQSDFQDFQGYAKPK
RLLPATEVKISTDTSPRTFSSFSPKESRSLFKVKIKTSNIYGSSLSDLNAGILLCLIDEN
GDSILQRIPSSSMTYHSTKTEDSIDPDRMHFQRGSSDEFTFEGPRLGQIEALWISLESGQ
WRLRGISLTIIDACESSLEEDGEEKIQCKGYCYDFEVDDILLGEGSNASMVELRPSRLTE
LSGLDPFTFLATAESQSNSLSNAQISKEESLKEYADLKFSLLLYDAILILVGTSVTSFSI
GESSALAFLIGGFSGFLYLLLLQRSIDGLPAPKSISSQPQNQFKSPLLSIALAVGISFLA
LKYSNISGDDVLPFVLTPKDLLVGMLGFLACKVAVVLAAFKTVPVSLKENK*

Transcript Sequence

Transcript ID

orange1.1t02113.1
Transcript Infomation

gene=orange1.1t02113 CDS=126-1361
Sequence

TAGAAATATAAAAAGTATGGGGTTCATAAAATAAAACCCACGCCGTAATTATTACTCAAT
CAAAAAAAAAAAGTATTACCCATCAAAAACAGAGCAGCTCTCTGTTGCTCACGGGTGAAG
CATCAATGGAATCGGTATCTCTAAAGCAATTAATTTCCGCGACAAATTGGAGATACCCAA
TAATCCCACTCCGTTTGTACTCAAGAAATCTTAGTCTACACTTTCAAAATCGTCGCTTTC
CGTGTCCTCTTATTCGCTCTAAACAATCTGACTTTCAAGATTTTCAGGGCTATGCAAAAC
CTAAACGTCTGTTGCCAGCCACAGAAGTGAAAATCTCTACTGATACCTCACCAAGGACAT
TTTCTTCTTTCAGTCCCAAAGAATCTCGGTCTTTGTTTAAGGTTAAGATAAAGACAAGTA
ACATATATGGCTCAAGTCTGAGTGATTTGAATGCTGGTATACTCTTGTGCTTGATAGACG
AAAATGGTGACTCAATATTACAGAGAATACCTTCTAGTTCAATGACTTATCATTCTACCA
AGACAGAGGACTCAATTGATCCTGATAGGATGCACTTTCAAAGAGGTTCTTCTGACGAGT
TTACCTTTGAGGGACCTAGACTGGGACAAATTGAAGCTCTTTGGATCAGTCTTGAATCAG
GTCAGTGGAGATTAAGAGGCATAAGCCTTACAATCATCGATGCTTGTGAATCTTCATTGG
AAGAAGATGGCGAAGAAAAGATCCAATGTAAAGGCTATTGTTATGATTTTGAAGTTGATG
ATATCTTGCTTGGGGAGGGAAGCAATGCGTCCATGGTGGAGCTTAGACCTTCCCGTTTAA
CTGAATTATCTGGGCTCGACCCATTCACCTTCTTGGCTACAGCTGAGTCACAATCAAATT
CACTTTCGAATGCTCAGATATCTAAGGAGGAAAGCCTGAAGGAATATGCAGATTTGAAGT
TCTCTTTATTACTTTATGATGCTATTTTGATTCTTGTTGGTACATCAGTTACATCATTCT
CAATTGGCGAAAGTTCTGCTTTGGCATTCCTGATTGGTGGGTTCAGCGGGTTTTTGTATC
TGTTGCTACTGCAAAGGTCCATTGATGGATTGCCAGCCCCAAAATCAATTTCCAGCCAGC
CCCAGAATCAATTTAAATCTCCATTGTTGAGTATTGCATTGGCAGTAGGAATATCATTTT
TAGCTCTCAAGTATAGTAACATCTCAGGAGATGATGTTCTTCCCTTTGTGCTTACCCCCA
AAGACCTCTTAGTTGGGATGCTGGGATTTCTTGCATGTAAAGTGGCCGTGGTTCTGGCTG
CCTTCAAGACAGTGCCAGTGAGTCTGAAGGAGAACAAGTAATACATTCTCGTGTTATGCT
TTATTTAAAGGGAAAGATAGATTGTAGAATGTATTGGTTATTTGGACAAATACCTAATAA
GAAGACATCTGAATGCGTATATTTTCGGGAGACAAAACAACATCTAGATGCATATATTTT
CGGAGAACAAAACAAAACTTCTAGAAGAAAGGAAGTGACCTAATATTGCAGAGCTCGTAT
GTATTAATGTATAATGCTGTGCTTTAGTGGATAAAAATATTACGAGGTTTTGCGTTTGCC
GGGAGTCGAACCCGGGTCTATTGCTTGGAAGGCAATTATCCTAACCGTTGGACTACAAAC
GCTTGTG