Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02096.2
CDS Infomation

gene=orange1.1t02096
Sequence

ATGGAAACCCTGAATTTCCCACACGAAACCCAAGTTTTCAAATCCGCTGCCGTTTCAAGG
CTCCTGCTTTTAGCGCTAATAGTACTCTGGCGAGCTCTCTTAAGCCCCTACGACACCTCC
GCTCCGTTAAACCCCAATTGCCTCGTCGATCCCCACCAACAACAACACTCGCCTAACAGT
TCGATCGGTTCCAGAATCGAAAGTAGCATCGTTTGGGACAGCGTCTACTTCGTCCGTATC
GCTCAATGCGGGTACGAGTACGAGCAGTCTTACGCTTTCCTCCCCCTCCTTCCCGCTTTC
ACTCACCTGTTATCTCGCTCAGTTCTAGCGCCGTTGATTGGCGTTATTGGGTATAGGGCT
GTGTTGGGATTGGCTGGTTATATTGTCAGCAATGTAGCTTTCTTGTTTGCTGCGGTTTAT
TTTTACAGGCTATCGGTTATGATCTTGAAAGACCCTGATGCAGCTTTGTGCGCTTCACTG
TTGTTTTGCTTCAATCCGGCTTCCATCTTTTATACATCAATATATTCAGAGAGTTTATAT
GCACTGTTTTCAGTTGGGGGATTGTACTACTTAATGTCTGGTGCATTAAACATTTCGGTT
CTTTGGCTTGCTATCTCTGGTTGTGCAAGGTCTAATGGAGTGCTTAATGCCGGATATTTC
TGTTTTCAGACTATGCATCAGGCTTATGATGCTTTATTCCTGAAGAAACGCCATTTTTTG
GCAATGTGGATTCTTGTTTGTGGAGCGTTGCGCTGCATATGCATCTTTGCTCCATTTATT
TCTTTCCAAGTATATGGCTACTTCAATATGTGTCTTGGACGTTCTCCAGATGAAATGAGG
CCTTGGTGCAAAGCAAAAGTACCATTACTGTACAATTTTATTCAAAGTCACTATTGGGGA
GTGGGTTTCTTGAGGTACTTCCAATTCAAACAGTTGCCAAACTTTCTTCTTGCGTCACCA
ATGTTAACCCTGGCACTTTGCTCTATTATCCATTATGTGAAGTCACAGCCCGAGCTTGTT
TACTCCTTAGGTTTTCGAGCTTCCAATGAGGGAAAAGAGTATGCTCCTGTGTTTTTTTCT
TCAGGCGCAGCCCCAAAATCAAATAGTGCCCCTGTTGCAGAGAAACCCCTTTCAAAAATA
CACGGTACTCAAAATTTGAGGCTGAGGAAGCAAATGCAAAAAGGAGGGAATCCTGCTCTG
GTTCCAGTTGACTGTGGATCGACAATGAAGTCTGGATACTTGTCTCCTGCTGTCCTGCCT
TTTATCTTTCACTTGGGTTTTATGGCAGCAACAGCCTTTTTTGTGATGCATGTCCAGGTT
TCAACTCGGTTCTTATCTGCTAGTCCTCCTCTTTACTGGTTTGCTTCGTATTTAATAATG
TCACCTGTTATGGATAAGAGATGGGGTTATTTGATCTGGACGTATTGCGCAGCCTACATC
CTTATAGGCAGCTTGCTCTTTTCAAACTTCTACCCGTTCACTTGA

Peptide Sequence

PEP ID

orange1.1t02096.2
PEP Infomation
Sequence

METLNFPHETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNS
SIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRA
VLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLY
ALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFL
AMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWG
VGFLRYFQFKQLPNFLLASPMLTLALCSIIHYVKSQPELVYSLGFRASNEGKEYAPVFFS
SGAAPKSNSAPVAEKPLSKIHGTQNLRLRKQMQKGGNPALVPVDCGSTMKSGYLSPAVLP
FIFHLGFMAATAFFVMHVQVSTRFLSASPPLYWFASYLIMSPVMDKRWGYLIWTYCAAYI
LIGSLLFSNFYPFT*

Transcript Sequence

Transcript ID

orange1.1t02096.2
Transcript Infomation

gene=orange1.1t02096 CDS=1-1485
Sequence

ATGGAAACCCTGAATTTCCCACACGAAACCCAAGTTTTCAAATCCGCTGCCGTTTCAAGG
CTCCTGCTTTTAGCGCTAATAGTACTCTGGCGAGCTCTCTTAAGCCCCTACGACACCTCC
GCTCCGTTAAACCCCAATTGCCTCGTCGATCCCCACCAACAACAACACTCGCCTAACAGT
TCGATCGGTTCCAGAATCGAAAGTAGCATCGTTTGGGACAGCGTCTACTTCGTCCGTATC
GCTCAATGCGGGTACGAGTACGAGCAGTCTTACGCTTTCCTCCCCCTCCTTCCCGCTTTC
ACTCACCTGTTATCTCGCTCAGTTCTAGCGCCGTTGATTGGCGTTATTGGGTATAGGGCT
GTGTTGGGATTGGCTGGTTATATTGTCAGCAATGTAGCTTTCTTGTTTGCTGCGGTTTAT
TTTTACAGGCTATCGGTTATGATCTTGAAAGACCCTGATGCAGCTTTGTGCGCTTCACTG
TTGTTTTGCTTCAATCCGGCTTCCATCTTTTATACATCAATATATTCAGAGAGTTTATAT
GCACTGTTTTCAGTTGGGGGATTGTACTACTTAATGTCTGGTGCATTAAACATTTCGGTT
CTTTGGCTTGCTATCTCTGGTTGTGCAAGGTCTAATGGAGTGCTTAATGCCGGATATTTC
TGTTTTCAGACTATGCATCAGGCTTATGATGCTTTATTCCTGAAGAAACGCCATTTTTTG
GCAATGTGGATTCTTGTTTGTGGAGCGTTGCGCTGCATATGCATCTTTGCTCCATTTATT
TCTTTCCAAGTATATGGCTACTTCAATATGTGTCTTGGACGTTCTCCAGATGAAATGAGG
CCTTGGTGCAAAGCAAAAGTACCATTACTGTACAATTTTATTCAAAGTCACTATTGGGGA
GTGGGTTTCTTGAGGTACTTCCAATTCAAACAGTTGCCAAACTTTCTTCTTGCGTCACCA
ATGTTAACCCTGGCACTTTGCTCTATTATCCATTATGTGAAGTCACAGCCCGAGCTTGTT
TACTCCTTAGGTTTTCGAGCTTCCAATGAGGGAAAAGAGTATGCTCCTGTGTTTTTTTCT
TCAGGCGCAGCCCCAAAATCAAATAGTGCCCCTGTTGCAGAGAAACCCCTTTCAAAAATA
CACGGTACTCAAAATTTGAGGCTGAGGAAGCAAATGCAAAAAGGAGGGAATCCTGCTCTG
GTTCCAGTTGACTGTGGATCGACAATGAAGTCTGGATACTTGTCTCCTGCTGTCCTGCCT
TTTATCTTTCACTTGGGTTTTATGGCAGCAACAGCCTTTTTTGTGATGCATGTCCAGGTT
TCAACTCGGTTCTTATCTGCTAGTCCTCCTCTTTACTGGTTTGCTTCGTATTTAATAATG
TCACCTGTTATGGATAAGAGATGGGGTTATTTGATCTGGACGTATTGCGCAGCCTACATC
CTTATAGGCAGCTTGCTCTTTTCAAACTTCTACCCGTTCACTTGATAAATCTTCTATCAT
GGCGTTTTATTGATATACCCATCTCGGAGCTTCTCTCAACCGAAGTTGTTGCAATTTTCC
TCACCTCGAACTGGACTGCTTAAATTCTTCATTCTAATCATACAAAATTACAAAATCCAC
TCACTGGATGCCCCTGCAGTAATTCGAGTAAATCCGCAGCAAGAGATGATCGCTTCTGTC
GTCAGTATCTATCATTTTTCTTTTAATCTTAGGCTGAACAGATTGGTGAACCATTTTTGC
TATTCGAATTTTGTAGGCCCAGATAGTGCAGATTTGGCTATGAAAATTTTTGAGTTTATA
AGAGTTGATGTAAGTAGTGTTCTTCTGTTAAGAAAATAAAAATTATATAAAATAAAAGGG
TATATTTGAT