Gene sequences

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SNP Detection
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Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	orange1.1t02093.6
CDS Infomation	gene=orange1.1t02093
Sequence	ATGGAAAACGAAGAAGAATTGAAAGAGCCAGAGAAGAAGAAGCCGCACTTGAACTTGAAT TCTCACTCTCACTCTCACTCTCACTCTTTGTCTCCAACCATGGCTCGTAATACCCCTAGT TCCCCTTCCAGTAACAAATCTGTTGATTCAGCGGTTCTCCAATACCAGAATCAGAAACTA GTGCAGCAACTAGATTCTCAGAAGCATGAGTTGCAGAGTCTTGAAGCCAAAATTAAAGAA TTACAAGAGAAGCAAACTTCATATGATGAAATGTTGATCACAGTGAACCAACTTTGGAAT CTGTTTGTCGATGATTTGATCCTGCTTGGAGTACGGGCTGGGGGAGGATCAAATGTTTTA CAAAAGTTGGATTCTGAAAACCAGACACGAGATTCAATTCCATCTGGTCCTCCAGAGGAT ATGTTTCTCTGTAGACTACTTCAAGTGAATTCCATTGAGAGCAGTAGCAAAGATGGAATA CTCCAATATGTTGAAGAGGCCCTTGCCTCACGTCACTCATCTGCTAGGGAGTTGATGAAA TTTATTGAAGAAGTCATTGATGCTCAGAGAGTGAAAACTAAGAGCATAGCTGAGGCTTTC CATGAAAAGCTATCTGCAGAAGATGCCATTATCCAGCTGTCTAAGATTGATGATATGATG AAAGAAGAGGCTAAAAATCTGCATGAGGTGATGGAGATTATCCACTTGAAGCATAAGGAA TATGCTGATCAAATTGAGAATTACATAAGCAGTCATTCGGTTGATCAAGCTGAGATTCAA CACCTTGCAGGTGAACTTGAAGAGACCATGGCTGAACTTGAGGAAAGTAGAAGAAAACTG GTCAGTCTAAAGATGCAAAAAGATATAGCATCCGGTACGCATTCACTGGTTCCAGCTGCT GCTATGGTAAATGGAAGTGTATCGCCAGAGAAGAGGCCTGCTGATGGGAGGATGGATTTG CAAGAATTGAAGGATTCTGTCGAGGAAGCAAAGATACTGGCAGCAGACCGTCTTTCCGAG GTTGAAGAAGCACAGCAAGACAATATAAACTTGTCAAAACAATTAGAGAATCTTCAGAAT GAGCTGAATGACGACAAATATGTACACTCATCTCGATTGTATAATTTAGTAAATGATCAA CTCCAGCATTGGAATGTTGAAGTAGAACGATACAAAGCATTGACAGATTCTTTGCTGATT GACAGGTCTCTTGTTTTGAGAAGAGAGAAGGAAATAAATGTAAGAGCAGAGTCGGCAGAT GCTGCAAGGAACACCGTTGATGATTCTGAATCTAGAATTGAACGGCTGGAGGTTCAGTTG CAGAAGAGTATCATTGAAAAAAATGATCTTGGTCTCAAAATGGAAGAAGCCATTCAGGAT TCAGGAAGAAAGGATATTAAAGCAGAGTTTCGGGTGATGGCTTCTGCTTTGTCCAAGGAA ATGGGAATGATGGAAGCTCAGTTGAATCGGTGGAAGGAAACTGCGGATGAGGCCCTTTCT TTGCGTGAAAAAGCAGTCTCTCTAAAAGTGTCCTTAAGTGCAAAGACAAATGAACAAAAG CGCTTGACAGACAAATGTGTGGAACAGATGGCAGAAATCAAATCCCTGAAGGCCCTAATT GAAAAGTTGCAAAAGGACAAACTGGAATCGCAGATTATGTTGGACATGTATGGCCAGGAA GGTCGTGATCCCAGGGATTTGATGGAGATAAAAGAATCAGAACGTAGAGCTCATTCACAA GCTGAAGTCCTGAAAAATGCCCTGGATGAACATAGTCTAGAGTTGAGGGTGAAAGCTGCT AATGAGGCTGAGGCTGCTTGCCAGCAAAGGCTTTCTGCTGCAGAAGCTGAAATAATTGAA CTGGTGGCCAAACTGGATGCTTCTGAGAGGGATGTGATGGAGCTCGAAGAGGCTATGAAA AGCAAAGATCGAGAAGCGGAAGCATACATTGCTGAAATGGAGACCATTGGTCAAGCATTC GAAGATATGCAGACACAGAACCAGCATTTGCTCCAGCAAGTGGCTGAGAGGGATGACCTA AATATTAAGCTTGTCTCTGAGAGTGTGAAGACTAAGCAAGTGCAAAGCTTTCTACTCTCT GAGAAGCAGGCACTGGCAAGGCAACTTCAACAAATCAATGCATTGGTGGAATCTGCAAAA TTGAGAATTCTCCATGCTGAAGAACAGATGAAAGCCTGTCTGACAGAGGCTCTTAGATAT AACTCTGAAGACAGACATCTTGCAGTCAACCTTGAAACTACAAAGTGGGAATTAGCAGAT GCAGAGAAAGAGTTGAAGTGGCTGAAGTCTGCCGTTACTTCTTCTGATAAGGAATATGAG CAGATCCAGCGGAAGACGGAAGACATGCGAAAAGAATTGGAAAATGAAAGGTGGGTTGTT TTTTTAATGCTGGTTTGA

Peptide Sequence

PEP ID	orange1.1t02093.6
PEP Infomation
Sequence	MENEEELKEPEKKKPHLNLNSHSHSHSHSLSPTMARNTPSSPSSNKSVDSAVLQYQNQKL VQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLWNLFVDDLILLGVRAGGGSNVL QKLDSENQTRDSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMK FIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKE YADQIENYISSHSVDQAEIQHLAGELEETMAELEESRRKLVSLKMQKDIASGTHSLVPAA AMVNGSVSPEKRPADGRMDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQN ELNDDKYVHSSRLYNLVNDQLQHWNVEVERYKALTDSLLIDRSLVLRREKEINVRAESAD AARNTVDDSESRIERLEVQLQKSIIEKNDLGLKMEEAIQDSGRKDIKAEFRVMASALSKE MGMMEAQLNRWKETADEALSLREKAVSLKVSLSAKTNEQKRLTDKCVEQMAEIKSLKALI EKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAA NEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETIGQAF EDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQINALVESAK LRILHAEEQMKACLTEALRYNSEDRHLAVNLETTKWELADAEKELKWLKSAVTSSDKEYE QIQRKTEDMRKELENERWVVFLMLV*

Transcript Sequence

Transcript ID	orange1.1t02093.6
Transcript Infomation	gene=orange1.1t02093 CDS=176-2593
Sequence	CAACACTTGTCTCTTTCACTCACTGTCGCTCTCTTGCAATTGACGAAGAATTAAAAAAAA AAAAATTCCATTTATTTGCCGCGAACCGAAAGAAGGCAGCAGCAGCCGTAGCCGTTACCA AAACGTCGCCGTCAAACGAACGGGTTTTGAATTGCAGAGGTCTGTAAATGAGTAAATGGA AAACGAAGAAGAATTGAAAGAGCCAGAGAAGAAGAAGCCGCACTTGAACTTGAATTCTCA CTCTCACTCTCACTCTCACTCTTTGTCTCCAACCATGGCTCGTAATACCCCTAGTTCCCC TTCCAGTAACAAATCTGTTGATTCAGCGGTTCTCCAATACCAGAATCAGAAACTAGTGCA GCAACTAGATTCTCAGAAGCATGAGTTGCAGAGTCTTGAAGCCAAAATTAAAGAATTACA AGAGAAGCAAACTTCATATGATGAAATGTTGATCACAGTGAACCAACTTTGGAATCTGTT TGTCGATGATTTGATCCTGCTTGGAGTACGGGCTGGGGGAGGATCAAATGTTTTACAAAA GTTGGATTCTGAAAACCAGACACGAGATTCAATTCCATCTGGTCCTCCAGAGGATATGTT TCTCTGTAGACTACTTCAAGTGAATTCCATTGAGAGCAGTAGCAAAGATGGAATACTCCA ATATGTTGAAGAGGCCCTTGCCTCACGTCACTCATCTGCTAGGGAGTTGATGAAATTTAT TGAAGAAGTCATTGATGCTCAGAGAGTGAAAACTAAGAGCATAGCTGAGGCTTTCCATGA AAAGCTATCTGCAGAAGATGCCATTATCCAGCTGTCTAAGATTGATGATATGATGAAAGA AGAGGCTAAAAATCTGCATGAGGTGATGGAGATTATCCACTTGAAGCATAAGGAATATGC TGATCAAATTGAGAATTACATAAGCAGTCATTCGGTTGATCAAGCTGAGATTCAACACCT TGCAGGTGAACTTGAAGAGACCATGGCTGAACTTGAGGAAAGTAGAAGAAAACTGGTCAG TCTAAAGATGCAAAAAGATATAGCATCCGGTACGCATTCACTGGTTCCAGCTGCTGCTAT GGTAAATGGAAGTGTATCGCCAGAGAAGAGGCCTGCTGATGGGAGGATGGATTTGCAAGA ATTGAAGGATTCTGTCGAGGAAGCAAAGATACTGGCAGCAGACCGTCTTTCCGAGGTTGA AGAAGCACAGCAAGACAATATAAACTTGTCAAAACAATTAGAGAATCTTCAGAATGAGCT GAATGACGACAAATATGTACACTCATCTCGATTGTATAATTTAGTAAATGATCAACTCCA GCATTGGAATGTTGAAGTAGAACGATACAAAGCATTGACAGATTCTTTGCTGATTGACAG GTCTCTTGTTTTGAGAAGAGAGAAGGAAATAAATGTAAGAGCAGAGTCGGCAGATGCTGC AAGGAACACCGTTGATGATTCTGAATCTAGAATTGAACGGCTGGAGGTTCAGTTGCAGAA GAGTATCATTGAAAAAAATGATCTTGGTCTCAAAATGGAAGAAGCCATTCAGGATTCAGG AAGAAAGGATATTAAAGCAGAGTTTCGGGTGATGGCTTCTGCTTTGTCCAAGGAAATGGG AATGATGGAAGCTCAGTTGAATCGGTGGAAGGAAACTGCGGATGAGGCCCTTTCTTTGCG TGAAAAAGCAGTCTCTCTAAAAGTGTCCTTAAGTGCAAAGACAAATGAACAAAAGCGCTT GACAGACAAATGTGTGGAACAGATGGCAGAAATCAAATCCCTGAAGGCCCTAATTGAAAA GTTGCAAAAGGACAAACTGGAATCGCAGATTATGTTGGACATGTATGGCCAGGAAGGTCG TGATCCCAGGGATTTGATGGAGATAAAAGAATCAGAACGTAGAGCTCATTCACAAGCTGA AGTCCTGAAAAATGCCCTGGATGAACATAGTCTAGAGTTGAGGGTGAAAGCTGCTAATGA GGCTGAGGCTGCTTGCCAGCAAAGGCTTTCTGCTGCAGAAGCTGAAATAATTGAACTGGT GGCCAAACTGGATGCTTCTGAGAGGGATGTGATGGAGCTCGAAGAGGCTATGAAAAGCAA AGATCGAGAAGCGGAAGCATACATTGCTGAAATGGAGACCATTGGTCAAGCATTCGAAGA TATGCAGACACAGAACCAGCATTTGCTCCAGCAAGTGGCTGAGAGGGATGACCTAAATAT TAAGCTTGTCTCTGAGAGTGTGAAGACTAAGCAAGTGCAAAGCTTTCTACTCTCTGAGAA GCAGGCACTGGCAAGGCAACTTCAACAAATCAATGCATTGGTGGAATCTGCAAAATTGAG AATTCTCCATGCTGAAGAACAGATGAAAGCCTGTCTGACAGAGGCTCTTAGATATAACTC TGAAGACAGACATCTTGCAGTCAACCTTGAAACTACAAAGTGGGAATTAGCAGATGCAGA GAAAGAGTTGAAGTGGCTGAAGTCTGCCGTTACTTCTTCTGATAAGGAATATGAGCAGAT CCAGCGGAAGACGGAAGACATGCGAAAAGAATTGGAAAATGAAAGGTGGGTTGTTTTTTT AATGCTGGTTTGATGTCGAGCTCTGGTTATATGTCATCCATCATGAACATCCGTAGTTGG GATGTTGAAAATAATTGAGTGCAACAAAGGGTAATTGCTGGGACATATTGATCTCGATCC TTGTTTCAACATACTCATCAAGTTATTCGTGGATTTCTATCATGTCACTGCCTTAGAATT AGCTCATGGACCAATTTTTTCCTCAAATTTCGGCTTTATCAATGTTTTGTTAATCCAGAA ATGAAAGAAAGAAGCTAGAGGAAGAGCTCATGGAAGTAAATAATAAGGTTGCCGAATTGA CTTCTGAAACTGGTGAGGCTGCAATACAGAAACTTCAGGACGAGATAAAAGATTGCAAAG CAATTCTCAAGTGTGGCGTGTGTTTTGACCGCCCCAAAGAGGTTAGTATGCCATCCCATT GCTTATTGCTTACTTTATGCTAGGTGATGTT